Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0350800 |
| Transcript ID | LotjaGi4g1v0350800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endo-1,3(4)-beta-D-glucanase; TAIR: AT3G23600.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase; TrEMBL-Plants: tr|I3SJ69|I3SJ69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0350800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72939622..72942595) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAGGGCCACAATGTTGCTCAAACCCACCAACCATTAACCCCACTGCAGGTGCAGGCCATGTTGAGAAATTTGCTGG TCTTGATTCCTATCTCACTGGCTCCCCTCACTCTAAGCTTGCCATTCTACTTGTCTCTGACATTTATGGTATCTTTCAAA CACCCCATCTTCACTTTTGCATTCTATGAAGAGACTCTGGTTTCATTTCCAACTCCATCTAGTGGGAAAAGGCTTGCTTG TTGTTGTTGGCTGTATCAATATATTTTTTTAAAGGTTATTATCGCCTGTAGCCAATAATATCATCTTTTAACTTCACATG CTTGATTTGTTTTGTAGGATATGAAGCGCCGAATTTAAGGTATGATCTTATACTCAAGTCTCATGCCTATTGTCTATTTC TAAGTTAGCTAATTTTTTTACTTTATATGTTAGAGCAAGTTATCTTGGTTTCATACTGTCCAATTTCCAATTAATCGCGG ACCATCACGGTGAGTCAAAAATCCACTATTTCAGCCGCTATTTGGAGGCGAATAGCGCGCTATAGTGGCAATAGCGGCGT CACAATTAGCAAAAAAATCCTACTTTTCCATTTTAAAGTAATGGCTCATAATCTTTAGGTAACAGTGAATGATAGATTTC AATTTTCGTAGGGAATTAATCAAATATATATCTATATCAACATGTTAACTGTAAATTATGAATTATGATATAATCATCTT CTTTCTTGGGAAGTCTACCTTTTACTCTCAAATTTTATCAAGTTCTGGTGAATTATTCCACTAATGGAATCTGGCTGTTT AACTCTCTTTTCCAATTCTCTCTTTCTCCATCTCTCTCTCTCTCTCTATGGTGCCAAATGTAGTGTATCTCTGGGCAGTG ATACTGTTTGTCCTCTGTTGTTAAGGAACCTTGCAGACAAGGTTGCAGCTGCTGGATATTATGTGGTTGTTCCTGACTTC TTCTATGGTGACCCATATAATCCTGAGAATGCTAACAGGCCTTTACCTGTTTGGTTAAAAGATCATGGAACGGTAAGTTC TTATTTATAATAATTGGTTTTTACAATTACAAGCTGTTTGAATGTTAGTGGGCCACCTGTATATCAGTATATATGTTTGG ATGAGTGGATCAAATACTATGGATTATCTCGCATAAAATGTATAGAAATTGTACATTGATTTGTAAACTTTTATTGTCAT TCTCATCTAGTGAAAAATGGTTTTTTTGTGTGTTGTAATTTGTAATTCATAATTCCCTGATTCTTTCATATCAATAATAG GACAAAGGATTTGAAGTTGCCAAACCCATAGTTGAAGCTTTAAAAAGTAAAGGTGTGTCGGCTATTGGGGCTGCTGGATT TTGTTGGGGAGGTAAGTACCTCTCATTCCACTCATTCGGAGTGCTTATAATTTCCCCTCCTCTTGTTTGCATATTGATAT ACTATATAGCACTTTCAGCTTCACTTAGGTGTAGTTTCTGGTATGGTTTGAAATTATGAACACAACTAAGCAATCAAACT CACAGAGTGTAGTCTTTCTCTTCTTTCCTTCAGCTAAGGTTGTGGTTGAACTTGCGAAATCCAGACTAATCCAAGCTGCT GTGCAATTACACCCATCATTTGTCTCTCTGGATGACATCAATGGTATGAATTCTCAATATTTAAATTTCTTCTGTCTGCA TATTTTAGTTATTGAAAACTTCACTGTATCTTCTAAGAATGACTACCAAAATTATGTTGCAGCTTCTTGTCATACCATTG ATATAGGCAATTAGGCATGTTCGGAATATAACTACAGTCCTCAGTCACTTCCTAAATAATCATATTTGTCTTTATGCTGA CTTGCAGTGTATTTTACTGTTTCTACATACTTCTGGTATGTCTGTATCATAATCATTACATTTTGAACATTTGATTGAAT AAAAGAGAAATAGATTTGGTAAACCGTAAACATCTTATGCTGAGCCTAAATATTGAGCACTTCACTTTATAAATGATGTT GAAGGTTTCTGAGTCCTAGAAGTACGATTGTTTGAAAGATGAGCAAACCATAATAGTGTTTTTTATGGACTGTGCTTGCA ATCTATTTTTCTGAAGGTCAATAATTTGCTACACAGGGGTATCTATATTTTATTTTTGTGTTGAAAAAATCTCCTTGCCT GTTGTCTTTTATTACAACAGTGTACTTAACTTCTGTTGATTTAATTGATTGTGCATAAGTTCTATTTTATTGGAGTTTGT TCCATACCAATTCATTCCGTTCTCATTTTTAAGCATATTTCTTAAGCAGTGACTATTGACTAAGATGTTCATATTCTAAC AGTCAATTATTGGTCTAACTTTTAGGTGTTGATATTCCAATTGCTATACTTGGAGCTGAGATTGACAAAATGTCTCCTCC AGAGCTTCTGAAACAGTTTGAACAAGTCTTAACTGCTAAACCTGGGGTCAGATATTTTTTTCTCTTTTTGCTGGTTATCT ACCATCATTTTAGATTACCTTTATGTTCTGATGATGATAATATTTTCTGGTTACTATGTGATTTTATTTTTAATTCAAAG ATGACGTGTTCTTTCATTATCAGTTTCCATTTTTTGGTTCTGATGGGTTCAGACAAGTTGAATTTGAGAAATCTATCTGT AGCTAAGCTCTGTTTAAATTTCATTTTTACCAAGCACATTGTGCTTTGTGTCTTGTTTTTGGCTACTGAAAAACATTCAT CGTCACCATCCTCTTGTCTACGTCATAACTCAGACCTTAAAGCTGGACCCATAACTGTTTCTTATTGAGAATGATTAATA TGGCTTCTGAATTGTTATTTTTATTTTTAGCAGGTTGATAGTTATGTTAAAATATTTCCTAAAGTCTCACACGGTTGGAG TGTGAGATACAACATCGAAGATGCAGAAGCTGTGAAGGCTGCTGAGGAAGCCCATCAGGACATGCTGGACTGGTTTGCTA AACATCTCAAGTGA
CDS sequence (LotjaGi4g1v0350800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGGCCACAATGTTGCTCAAACCCACCAACCATTAACCCCACTGCAGGTGCAGGCCATGTTGAGAAATTTGCTGG ATATGAAGCGCCGAATTTAAGGAACCTTGCAGACAAGGTTGCAGCTGCTGGATATTATGTGGTTGTTCCTGACTTCTTCT ATGGTGACCCATATAATCCTGAGAATGCTAACAGGCCTTTACCTGTTTGGTTAAAAGATCATGGAACGGACAAAGGATTT GAAGTTGCCAAACCCATAGTTGAAGCTTTAAAAAGTAAAGGTGTGTCGGCTATTGGGGCTGCTGGATTTTGTTGGGGAGC TAAGGTTGTGGTTGAACTTGCGAAATCCAGACTAATCCAAGCTGCTGTGCAATTACACCCATCATTTGTCTCTCTGGATG ACATCAATGGTGTTGATATTCCAATTGCTATACTTGGAGCTGAGATTGACAAAATGTCTCCTCCAGAGCTTCTGAAACAG TTTGAACAAGTCTTAACTGCTAAACCTGGGGTTGATAGTTATGTTAAAATATTTCCTAAAGTCTCACACGGTTGGAGTGT GAGATACAACATCGAAGATGCAGAAGCTGTGAAGGCTGCTGAGGAAGCCCATCAGGACATGCTGGACTGGTTTGCTAAAC ATCTCAAGTGA
Protein sequence (LotjaGi4g1v0350800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGPQCCSNPPTINPTAGAGHVEKFAGYEAPNLRNLADKVAAAGYYVVVPDFFYGDPYNPENANRPLPVWLKDHGTDKGF EVAKPIVEALKSKGVSAIGAAGFCWGAKVVVELAKSRLIQAAVQLHPSFVSLDDINGVDIPIAILGAEIDKMSPPELLKQ FEQVLTAKPGVDSYVKIFPKVSHGWSVRYNIEDAEAVKAAEEAHQDMLDWFAKHLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 27 | 27 | 3.5E-110 | – | |
| PANTHER | 1 | 27 | 27 | 3.5E-110 | – | |
| Gene3D | 15 | 214 | 200 | 1.8E-34 | ||
| Pfam | 24 | 214 | 191 | 2.0E-25 | ||
| PANTHER | 27 | 216 | 190 | 3.5E-110 | – | |
| PANTHER | 27 | 216 | 190 | 3.5E-110 | – | |
| SUPERFAMILY | 31 | 216 | 186 | 3.25E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0350800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…