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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0352300 |
| Transcript ID | LotjaGi4g1v0352300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein; TAIR: AT5G19090.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|F4JZL7|HIP33_ARATH Heavy metal-associated isoprenylated plant protein 33; TrEMBL-Plants: tr|A0A072USX2|A0A072USX2_MEDTR Heavy metal-associated domain protein; Found in the gene: LotjaGi4g1v0352300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73073483..73077029) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGTTTCATCACTCGCAACATCATTCTTTCCTCATTTCCGGCGGAGGATCCGCTTCTTGTTTCATCACCCCTTCTGTC CCGCCGTACACCGCCACCGGCATCTCCATTCTCCACCACATCAACCTCCGGTTTGCACCTCCACTTCCTCAGCCATGTAA CCACCGTGAACCACCAAGATCTCAACTGGAGGAGCTAGGCCAAAACACCAGATAATAGGGGTTAAGATAGCCGCTGATCC AATCAATTAATATTTAAAATTGAAATCTGGAAGGGTATATTTGTAATTGAATAATACCCAGATGTAATCAGAGCCGTGTA AATTATAATGATATATCCAACGGTTAAAAAGAAATAAATAACCTCACCTAGCTAAGCTTACACAATAAATAAAGGCACCA AACAAAGATGAAACTCTTGGAACACCATTTCAATATTTCTCTTTCTTTCTTTGTTTCTCTCTGCAACTTTGGCTCTCTCT TTCTCTCATGCCTCCTTCTCCCAATGACTACTCATCACTACTCTCTCTGAGCCTTGCTGGTTAGGTTCCCTGTCTCTGCT CAGAGACTCTGAACCTTTTCTTTTCTCTCATTTGCTCTCTGTAAAGCCTACCTAGGAAACAAAACAATCACACTCTATTT TCCTATTTTAATTTCCTTTCTGTCATTTCATTCCTCCTCTTATCTCAGATCTATTACTATACCACCTCCCTTCCTCTGTT CCTTAGATCTTTCATTATTACAACTTACAACAACAGCAACCTTTGTTTGTTCTGTTGGTGGTTCTAAACATGAGTAAAGA AGAATTTTTGAAGATACAGGTACACTACTACTACTACTACTACTACTACTACTACATTCTAACTTTATTAGTTGAATAGT TGTTCTACTTCTTAATTGGTGTAGCTTATTTATTTGTCTTTGTGATTTGCTACATTTTTTTTCTGATAAAGGAGAAGTTT TGTCCCTGTTCAGTTCTTTTGATTTTCACTTTTTTTTACCTTCACACTGAAACTTGTGCTTATTCTGTTTTTTGGATTTT TGGGATTGCTTGTGCATGCAGAAATGTGTTCTTAAAGTGAACATACACTGTGATGGGTGTAAGCAGAAAGTGAAGAAAAT CCTGCAGAAAATTGATGGTATGTACTCTTGTAAATGACACCATGGTTACACTTTTTTTCTGATTCACATTAGATGAAAGA AAGAAAGAAACAGTTGTGCTTGCTTTCATTTATTATGTGAAGAGGTGAAAACAAAATCTCATGATGTTAGTTTAAATCTG TTGATTAATTACAGGGGTGTTTACTACTGAGATAGATGCAGAACAGGGGAAGGTCACAGTTTCAGGGAATGTGGACCCAA ATGTTCTCATCAAGAAGCTTGCAAAATCAGGGAAACATGCAGAGCTTTGGGGTCCTCCCAAAGCTAACAACAACAACAAT AATAATCAAAATAATCACAACCAGAATCTGGTTAACCAGTTGAAGAACATGCAAATTGACCATGGCAAAGGTGGTGGTAA CAACCAACCTAAGGGTGGTGGTGGTGGTCAGAATCAGAAGGGTGGTGGTGGTGGTGGTAACAACCAGCAACAGCAGCTGC CTAAGGGAGGAGGTGGTCAGCAAGGGCCAACTCAGCAGCAGATTCAGCAGCACCTGCAGCAACTTCAGCAGATGAAGAGG CTCCAAGATCTGAATCTGCCTCAATTGAAACCCCAGCAACAGCAGCATCCCAATCAGAATCCCCACAACATGATCACTAA ACAAGTCAAATTTGAAGATGATGATGACTTCTCTGATGACGAGTTAGATGAATTTGATGATGAAGATGATGACGATGAGT TTGATGATGAGTGTGATGATGATGAAATGGATGATCTTCCTCCAATGAAGATGAAGCCACAGGGGCAGCCACCTCCAGGG AACGCTCAAGCGATGTTGAATGCTATGATGAATGGTAAACACCCACAGTTCATGAACCCTCAGATGGGTGGGAACAATGG CGGTGGAGGAAATGGGAAGAAAGGTGGTGGAGGTGGTGGTGGTGGACCGGTCCCTGTTCAAGTACATGGCATGGGTGGAG GCAATGATGGTAAGAATGGAGGGAAGAAAGGTGGTGGCGGCGGCGGCGGCGGCGGCGGTGGAGGTAACAATCCGAATCCG AATGGAGGTAACAAGAATAATGGTGGTGGCAAAAATGGTGGTATGCCAGAGGGTAAAAATGGCAAGAATGGTGGTGGGAA CAGCAATAACAATGGTGGTGGTGGGGGTAAAAAGGGAAATCCAATGCAAATGGGTGATGGTGCTGCTGCAGCAGTTCAAG CAATGAAAAACAGTGGATTCCACCAAAGCATGGGTGGAGGAGGTGGTGGTGGTGGAAGTGGGGGTCGGCCTGGCATGCCA GGAGGCAATGTAGGGCCCATGAGCATGGCAATGAACCACCCACAAACGGGTAACATCCCAGCCGTACAAGGTCTGCCGGC AGCTGCCGTGAACGGCGGTGGATACTTCCAAGGTGGTGCTGGTCCCGATGTGATGCCTGGAAATCCCTACCAACAACAAC TACAGCAACAACAACAGCAGATGCAGCAGCAACAGTACATGGCAGCCATGATGAACCAGCAAAGAGCAATGGCAGCTGGA GGAGGAGGAGGAGGAGGTATCCAACAACCGATGATGTACGCGCGGCCACCTCCGGCCGTCAATTACATGTACCCTCCTCC TTACACTTACCCTCCTCAAGACCCCTACACCCACTTTTTCAGTGATGAGAACACTTCAAGCTGCAATGTCATGTGATGAT AGATATTGATGAATGATGATGATGAAGCTCCTTCAGTACTTCTGATTTGATGATGCTATGTTGTACCAGTGAAAATGAGA GTTTTTAATTTTATTTTGCTTTAATTTTTTTTTTCTCTTTTGAAGAACCCTTTAAATCATCCTAAGTTACATTACCATAG AGAGGGGGAGTAGTTTATAGATCTCTTATAATGTTTACCTTATTACTATCACCAATGTTTTCAGGTAGTAATAGTAGTAT TATGATAATGTCTATATATTGTCAATATGTTGGAGAAACCAATAAAAATTTTCTGAAATGAAGGAAAGACAATAGAGAAT GGGATGATGAAGAACAAAATTCCCATTTCTCTTGCTCATTTCTCACAATGATAGTGATGATAGTCTTATCTTGTTGGTAG CAACCATGACCATTGAAGATTGCTCTGCTCTCCAGCATTATTTATTTTTTCCTTTGTTTCAATGTGGGGGTGCGGTGCGC ACAGTGAGCAGTTCAAGCCATTCGGTGATGGACCCCACCAATTTAGTCTATTCCGACTAATGAGTGGAGCGGGTGGGCCA TACCATAATCGTCGCCATCGCACAATGGTGATAGACACCGAATTCTTCTCGTGAATGAATGTTTATATTATTTATATAAA AATAATTTAAGAATTTGGTAGTGCAACAGTGTGAGGTCCATCTAATGTTCATGTTACAGTTTGTCACAACCCAATAATTT GATGTTAAATCTCAAATATCTCTTGAC
CDS sequence (LotjaGi4g1v0352300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAAAGAAGAATTTTTGAAGATACAGAAATGTGTTCTTAAAGTGAACATACACTGTGATGGGTGTAAGCAGAAAGT GAAGAAAATCCTGCAGAAAATTGATGGGGTGTTTACTACTGAGATAGATGCAGAACAGGGGAAGGTCACAGTTTCAGGGA ATGTGGACCCAAATGTTCTCATCAAGAAGCTTGCAAAATCAGGGAAACATGCAGAGCTTTGGGGTCCTCCCAAAGCTAAC AACAACAACAATAATAATCAAAATAATCACAACCAGAATCTGGTTAACCAGTTGAAGAACATGCAAATTGACCATGGCAA AGGTGGTGGTAACAACCAACCTAAGGGTGGTGGTGGTGGTCAGAATCAGAAGGGTGGTGGTGGTGGTGGTAACAACCAGC AACAGCAGCTGCCTAAGGGAGGAGGTGGTCAGCAAGGGCCAACTCAGCAGCAGATTCAGCAGCACCTGCAGCAACTTCAG CAGATGAAGAGGCTCCAAGATCTGAATCTGCCTCAATTGAAACCCCAGCAACAGCAGCATCCCAATCAGAATCCCCACAA CATGATCACTAAACAAGTCAAATTTGAAGATGATGATGACTTCTCTGATGACGAGTTAGATGAATTTGATGATGAAGATG ATGACGATGAGTTTGATGATGAGTGTGATGATGATGAAATGGATGATCTTCCTCCAATGAAGATGAAGCCACAGGGGCAG CCACCTCCAGGGAACGCTCAAGCGATGTTGAATGCTATGATGAATGGTAAACACCCACAGTTCATGAACCCTCAGATGGG TGGGAACAATGGCGGTGGAGGAAATGGGAAGAAAGGTGGTGGAGGTGGTGGTGGTGGACCGGTCCCTGTTCAAGTACATG GCATGGGTGGAGGCAATGATGGTAAGAATGGAGGGAAGAAAGGTGGTGGCGGCGGCGGCGGCGGCGGCGGTGGAGGTAAC AATCCGAATCCGAATGGAGGTAACAAGAATAATGGTGGTGGCAAAAATGGTGGTATGCCAGAGGGTAAAAATGGCAAGAA TGGTGGTGGGAACAGCAATAACAATGGTGGTGGTGGGGGTAAAAAGGGAAATCCAATGCAAATGGGTGATGGTGCTGCTG CAGCAGTTCAAGCAATGAAAAACAGTGGATTCCACCAAAGCATGGGTGGAGGAGGTGGTGGTGGTGGAAGTGGGGGTCGG CCTGGCATGCCAGGAGGCAATGTAGGGCCCATGAGCATGGCAATGAACCACCCACAAACGGGTAACATCCCAGCCGTACA AGGTCTGCCGGCAGCTGCCGTGAACGGCGGTGGATACTTCCAAGGTGGTGCTGGTCCCGATGTGATGCCTGGAAATCCCT ACCAACAACAACTACAGCAACAACAACAGCAGATGCAGCAGCAACAGTACATGGCAGCCATGATGAACCAGCAAAGAGCA ATGGCAGCTGGAGGAGGAGGAGGAGGAGGTATCCAACAACCGATGATGTACGCGCGGCCACCTCCGGCCGTCAATTACAT GTACCCTCCTCCTTACACTTACCCTCCTCAAGACCCCTACACCCACTTTTTCAGTGATGAGAACACTTCAAGCTGCAATG TCATGTGA
Protein sequence (LotjaGi4g1v0352300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKEEFLKIQKCVLKVNIHCDGCKQKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIKKLAKSGKHAELWGPPKAN NNNNNNQNNHNQNLVNQLKNMQIDHGKGGGNNQPKGGGGGQNQKGGGGGGNNQQQQLPKGGGGQQGPTQQQIQQHLQQLQ QMKRLQDLNLPQLKPQQQQHPNQNPHNMITKQVKFEDDDDFSDDELDEFDDEDDDDEFDDECDDDEMDDLPPMKMKPQGQ PPPGNAQAMLNAMMNGKHPQFMNPQMGGNNGGGGNGKKGGGGGGGGPVPVQVHGMGGGNDGKNGGKKGGGGGGGGGGGGN NPNPNGGNKNNGGGKNGGMPEGKNGKNGGGNSNNNGGGGGKKGNPMQMGDGAAAAVQAMKNSGFHQSMGGGGGGGGSGGR PGMPGGNVGPMSMAMNHPQTGNIPAVQGLPAAAVNGGGYFQGGAGPDVMPGNPYQQQLQQQQQQMQQQQYMAAMMNQQRA MAAGGGGGGGIQQPMMYARPPPAVNYMYPPPYTYPPQDPYTHFFSDENTSSCNVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 535 | 535 | 1.3E-129 | – | |
| PANTHER | 1 | 535 | 535 | 1.3E-129 | – | |
| Gene3D | 9 | 75 | 67 | 3.3E-20 | – | |
| SUPERFAMILY | 10 | 75 | 66 | 1.44E-15 | ||
| CDD | 13 | 72 | 60 | 6.95832E-12 | ||
| Pfam | 14 | 70 | 57 | 1.3E-12 | ||
| ProSiteProfiles | 17 | 73 | 57 | 11.742 | ||
| MobiDBLite | 71 | 154 | 84 | - | – | |
| MobiDBLite | 77 | 100 | 24 | - | – | |
| Coils | 84 | 104 | 21 | - | – | |
| MobiDBLite | 115 | 154 | 40 | - | – | |
| SUPERFAMILY | 193 | 233 | 41 | 8.34E-5 | ||
| MobiDBLite | 199 | 228 | 30 | - | – | |
| MobiDBLite | 199 | 369 | 171 | - | – | |
| MobiDBLite | 346 | 360 | 15 | - | – | |
| MobiDBLite | 383 | 407 | 25 | - | – | |
| Coils | 458 | 478 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi4g1v0352300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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