Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0358900 |
| Transcript ID | LotjaGi4g1v0358900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein 214; TAIR: AT1G23170.2 transmembrane protein (Protein of unknown function DUF2359, transmembrane); Swiss-Prot: sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A; TrEMBL-Plants: tr|A0A151T2D8|A0A151T2D8_CAJCA Transmembrane protein 214-A family; Found in the gene: LotjaGi4g1v0358900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73764674..73771554) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTAAGAAAAATCCATGAGTATTTGTATTCATCGAAAAAAGAAAAAAGAAAAATCTGTTAGTAGATAAGGTAACAGAC ACTCGTAATAATATTCAAAGAAACACGTGTTATGTAGAAGCGAAACTCAATACGTGTTGACAAGTCATTGGATAGAACAC GTGCTACTTTCAACACAACTACCCCTTGGCATTACGGTAATTTCGTTAAAAGATCGAGGTCAATTCCATCAAGTCAACTC AATCAAATTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCTCAATTTTCCTTCCATTTTCCATC ACTTTCTCTTCCATTTTCCCCAGAGCGAGAGAAAGAAAATTCTCGAAAATTCACTCACTTCTCCAATGGAGGAAAACCAC GCCGCCGCAGCATTCGAATCCAACGACCATGGCTGGCAGAAGGTGACCTACGTGAAACGCCAGAGCAAGAAGAAGGCTGC TAATGGTGTTTCTGATTCCCGCGTCAAGGTTGCTCCCAATGGAACGGTTGCCGGCGGAGAGAGTATTTTCCGCTCGCTTG AGCTTGAGTCGGAGGATCGGCGCCGGCGCATTGTTGAGGCGCGGAGGGCGGCCGATGCTGCTGAATTTGATGACGGTTTT GTCAGATCGAAGCTGCGGGCTCGAGATGAGTATGATGATGGGGATTATGATGACGATGAGGATGTGGCTGAGAACGGGAA GGTGGAGGAGGTGAAGAAGGTGAAGGTGAAGAAGCCGAAGAAGCCTAAGGTGACTGTGGCGGAGGCGGCGTCGAAGATTG ATGCTTCTGATCTGGAGACATTTCTCGTTGATATATCGGTAGGGGGAATTTGATAATTGAATCGTGCATGTTTAGGTTTG ATCTGTTGGATCTATGAAGAAATGGTTTGAAATTTGAATTGTATTTGTGTATGTGTTTTGTGTTATGATAGGCTTCGTTC GAGAATCAGCAGGATATTCAGATGATGCGGTTTGCGGATTATTTTGGACGTGCTTTTTCTGCTGTGAAAGCTTCTGAGTT TCCATGGGTGAAGTTGTTCAGGGAGTCTCCTGTGGCTAAGATTGCTGATGTGAGTTCTGAATTCTTTGTTGATGTTATTG TATTATGATGTGAATGGTGCTGGTAAATGTATGTGTTTGTTGAAGTTTAACTGTGCTATGTGCTTGGGTTTTTGGATGAA TCACTGACCATTATACGCTAGGTTGTAATTCAATTTCATTGTTTTAAGGGTGAATTGCCCAATTCCTGCTACAAGATTTG GACTGACGCAATGAAGAGATCTTACATGTTTGTTAGTACCTTTAGTGTTGTGAGGTTCAATTGACATGCATGCATGTTGA TGCTAGTTAAAACCATTGGGATGTTGTTTTATGTGATACCATTTCCCATGTTTTGTTTTTTCTGAAATTGGGTAGTGTAA ATATGGTTAGTTAAGTAAGACTTTTCCTAGATACTTTCACCTTTTCCCTAATCGTTCCATGTTAAAAATATTTATGTCTC ATGGTTTAAAATGTTTTAATACTTGCTGATACTGCAGTGCTGAAATGTTTTTTACATGTTTCTGCCTCTACTGTTTAGCT AATTATGTTGAATCTGTTTTTTTAGTTGTTGTGGTAAATTGATGTTTGAAGAATATTTGATAATTATTTCAGGGTCTACA TTCTATCTTATGTTGTTTATCAGAATCTTGGTTCTAGTTTCTGATTTTCTCCTGTGAAGCTTACAACTGAATATATTTTT GCCAGGTGCCTCTTTCTCACATATCTGATGCTGTATATAAGACAGCAGCTGACTGGATTAACCACCGTTCTCCTGAGGCA CTTAGTTCCTTTGTGCTCTGGTCCTTAGATAGCATTCTTGCTGACCTGGGGAGCCATCAAACTGTGGCCAAGGGTTCCAA AAAGGCTGTGCAACAAGCAACTTCAAAATCTCAGGTAGCTTAAACTGAGTAGTCTTCTTTGCCATAGAATATTTTGTTTT CTTCTTCTTTTGTTTCTCTGTATAAAATAGTAACTTACATTAGGAGATATTGAGATAAGAATGGACAGAGAATCCTCCTC TAAAATCTAATCTAAAACAAGGCCACCCACCAAGCAGAAACAGAACTAAGCTGAAACAGAAATGTCAATACAGAGAAGCT CTCCTTTCACTCTGCAAATCTATCAGGAGAACTCTCCAGAAGAACCCATGAGCTGAACACCAAAGATAGGCCAAGTAAAC AATCTTGTTGCAAGGAGTGATTCACTAATGAATGAGATATTGACATGTTCCTTTATAAATCCAGATATTCCTTTCTTCCT AAATGCATTAAGTGATGCTTGATTTGTGCATGACTCTGATTCTTTGACATATGCAACGATGCAATTGGTAATTTTATTTA TTTATTGGGATGCCACTGGATTTCATATGATAAACCTCTTGTTTTACGTGTTCTAGTGGCCAGGATTGTAAAATTTCAAG AGGCTATAGCATTGCAAAGTTTTAGTCTTAGGTAGTCCTTTTTTAATATTTCCATTTTCTGATAAATGAACCAATGAGAT AAATGAACTACTGATATGTTTTCTTGAGAAAGGCAGCAGTCAATTCACGAGTGCCTTCCTGACATATATTAAAATGTGCA TCACTGGCATATATCCATGTTCTTAGTATTGTAATTGCTATGTTTGGTAGTTCCCAGAGTTGGCAAAATGAGGGCTTGGC TTTCATATTCAATCAATATGGCATTTTTCTCTTGAAATTGAAAGCAGTTGGAAATTAAATGAAATAGAGATGAAAAGCAA TGCTTCCATCTCCAGTAGGTTATGTTTGATCTGCAGTTGCTTCGTATGTAGTAGTTTGCTTATCTTCTGATTCATCATCT TGGTTGTGAATATTTTTTTTCATTTGAATTTAGCTTAACATATTTTTGTGACTCTTGGTCCCTCAATCACATTCAACTTT TATATGATTATGTGTAGCTATTCAAATCAAACACAATAGTGACAATACACTTTAATTTTTCCCCTGTTTTTTCAACTGTA AATGGAAATTGATTTTACATGACCTGCAGGTTGCAATATTTGTTGTTTTAGCAATGGTATTGCGTCGGAAACCTGATGCC CTTATTACTGTATTGCCCACACTGAGGGAGAATGCAAAGTATCAAGGACAAGATAAGCTTCCCGTGTTTGCATGGATGGT GGCTCAGGTGAGGTGTAGATGCCAAAATAACTTAAGAGAACTTATTAGACATCCAAAAGAAAAGTTATTTTTGGCTTTTT CAAAAGGATCCCATTTTGCTAATTCTTAATATTTAATTAATATTCACACATTTCTGTGCAGGTTACAGCGGGAGATCTCT CAGTAGGTTTGTATGCTTGGTCACGGAATCTCCTGCCTATAGTGAGTGGAAAAAGTGTTAATCCCCTATCGAGGGATTTG GTTTTGCAGCTAGTGGAAAAGTATGTTAATACATATGCTTTCTTTTATGTCCCTTTCTTGCTATTGCTATTGTTGTCATC ATCCTGATTATTTTTTGCGATTTACTGGCAGAATCTTGTCTACCCCTAAAGCACGGCCTGTTTTAGTAAATGGTGCTGTA AGAAAAGGGGAACGGCTGATTCCTCCTTCTGCATTTGAAATTTTGGTCCATGCTACTTTCCCTTCATCTTCAGCTAGAGT AAAGGTAAATATCCAGCTGGCTCTTCTATTTTTGAACATTTGAATTTACTGTAGCTCTAAATCTTCATATTTTTTTGACA ACTTGCTGCTTTTATATAGGCTACAGAAAGATTTGAGGCAATATATCCCACACTGAAAGAGGTGGCTCTTGGTGGTTCTC CTGGAAGTAAAGCAATGAAACAAGTTTCGCAGCAGATATTCAGTTTTGCTATCAGAGCAGCAGGAGACAGTATGTAGACC TTATGTTTATAGTTCATTTGTGTTCTCTTTTCTTGATTAGATGAAATATGTGTTTTAGAGGGTAAATTGAAATATATCTG TATTTTTCAGACAATCCTCAGTTATCTAAAGAAGCAGCTGGTATTTTTATTTGGTGTTTACGCCAAAGCACTGAATGCTA CAAGCAATGGGTGAGTTATTCCATCTAGACCCATATTGAGTCCATACAAGTTTTTTGCTTATTATATGTGTGTGTTTATA TGGAACCAAAAACAAAATTATCATAAGAGAAGAAATTTGTGTATTTAAAAATTGCACATTGATATCGTGAAATTATATTT ACTTATTTGGTCTTATTCTTTATTGGATATGGACAGGAAAAAGTTTATGAGGACAACATTGGAGCAAGCGTTTCGGTTCT AAAGAAGCTAACTGATGATTGGAAGGAGCAATCAACAAAATTGTCTCCTCATGAGCCACTGAGGGAAATCCTAAAGAATC TTAGGCCAAAGGTAGTTTTTCATTCATTTGTTTACATGATATATTTTCAGTATAACCTTGGCGCAACAGTAAAAAGTTGT TGCCATCTTGAGGTCACGGGTTCAAGTCACATTCTCTTGTGTTAAAAACAACCCAGCTGCCCTTTTAACTCTGCATCTGG GATCACATACAAATTACCTAGACATGGACTCACTGAACTTTGTTTATTCTATGAAGTAGCAGAATGTTAAACTTCATATC TAATGCTTTAACTATTGTTGGCTATAGAATGAGAAAGCATTGGCTACTGAAACAGATCCAGCTCGTCAAGCCCTCTTCAA GGATGCGGATAAATATTGTAAGATACTCTCAGGAAGAGTTTCTCAAGGCCATGGGTGCAGGACATGTTTGACCTTTACAG TTCTTGTTGTGGCTGTGGGTGCTGTTCTTTTGTCCCCCAACATGGAATCTTTGGACTTCAAGAAGCTCTCTGTAGTTTTC AACTCTCAGTTCTGAGTACTCTGAGATTATTCCGCATTACTGGCATTTGGTTGCATCAAACAGCAATTTGGTTGCATCAA TCAAATTGCTTCATTAGGAAGTGCATAATGCGGAGGTTGTACACTTAGCTCAGATCCTCTTTGGATGGCACAGAATAGTT GAGGTCGACAATGCCTTGAGGCTTTACTTTGGTTTGACCCTTCTATAATTTATTTGATGTTCTTGTTTCTGTTGAGCCAT AAATTTTAGTTATCTTTATGCCTTTACATCAACCATGCTGGCAAAAATGCCAATGAGTTAACAACACCTGGATTTTGAAG TAAACTTAGTTTAATGTAAGGAATTTTGATGACACCCTGCAGAGTTTTTCTCTAGCTTTTGCACTGTTTTAGTGTCTTCT CTCTGATGCCGATTTTTTTTTCCTTTTAATTGAACGACATTGTTGAGCTTATTAGATGGTCGATACAAAGAAGGAATAGA TGATTGCTGTTAGTGAAAAGAAGGGTTGGATAATTGCTTTGAGTGGTCTGCGTCATATGGATAAATTCAACTGAACCCCT CTTAATATTCAAAGCCAGAATAAGGTATAATCCTACATTGAAACACAATGTGGTTGGAGAAAACTGTACTTGAGAAATAC AATCGAACATCGAAATCGTTGGTGTTTTGATGGTAACTTCATGGATCATAATCTTCAGGTTCTGCATATGGATACTTGTA GTATGCGTTTTTTATTCTTGAAGGATCTTCAGGTATAGACCACGGGTACTTCATGGATGGATCCCGTGGGAACTTCCTGA AGTTTAGAAATGGTGCCCAAAGAAGGACCCTGCCCGAAAAAGTGTTGGAAAAATTAAGGAAATAACTTCACATAAATCAA AGCTTTCACAAAGTGAAAAATTGTTGAAAAATGAAATATTAATTGCACATTTATATTTCCCTTATAATAAATGTTTTTCA TTTTGTATAAAAACTTTAAACCTTTAAATTCTTATCATCATATCAAATGTTGATAGAGCCACTCACCCTGGGAAGAAAAT GAAGACAAACATGAATTGGAAATACATCTCCACAAGATTTCTTCTGTACCATCTTCTCCAGATCCAGTTGATGATTATTG GCTGCAATTCACCAAGTTATGCTCACTCAGATATCAGGACTCAGTTTCAGATATACTCAGGTTGCAAATATACAAGGACA GAACTTCAGGAAGTTTTGAGAAACAAGGACTTACAGGAGTTGCAATGAAGTAGAAAAAGAGAACAATCCCCAATTGTATC AAAACCCCGAAGAGTTCTTGTGGGTGGTTTTCACCAGTGACTGCTAATGCTGGGTGCTCAGCCTGTAAAAATAGCCACAA TCACCTCTTGTCTATGTTTTCAAAATGAGTGGAAGAAAGAATAGAATTTGTATCTACAAGAATCTCACCAAGGCCAAGAG TGCTCCTATGTGCAATGCCAAACTTGGTTTCTTTATGCTGAGATAATCATTTGTCTTCTGGCTGCAGCATGCAACTATCT GCAATTGGATTAATGGGATCAGGTTAGACAAGCTTTTCAATGAAAAGAGCTAACTAAAACTAATGGAAAATTTGAGGTAA AGCAAAATACATGTAGTGATTGGGAATGACTAGTGTTGTTGAGGGATGATTTCTGTTTGGAAGCAGTGAAGAGAGAAGCA GTCCCCCATGGTGAAGTGGGAATAGGAGGCAGAGCTTTGGGAACATGGAGGCTGAATGAGAAGCTCATTTTGGTTCCTTA TCCTTTTCATCAATTCAGTTCCATGGCAAAGGGTGAATGGCCTTCTGTGGAAAAAGATGACAAAATTAAATGTTGATGAT GATGACATGTGGATATGAGACTCATCCACCACCACTGCTCTTATGTAACACAAATTGCCTAAACTTTGTAAAAGTCTGTA GTCAACATGAATGTATGGATCTTGTTAAGATTTGGATCCAGTAAAACTTTAGTGGGATGAAAATCAAAACTTGGAATTTT C
CDS sequence (LotjaGi4g1v0358900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAAAACCACGCCGCCGCAGCATTCGAATCCAACGACCATGGCTGGCAGAAGGTGACCTACGTGAAACGCCAGAG CAAGAAGAAGGCTGCTAATGGTGTTTCTGATTCCCGCGTCAAGGTTGCTCCCAATGGAACGGTTGCCGGCGGAGAGAGTA TTTTCCGCTCGCTTGAGCTTGAGTCGGAGGATCGGCGCCGGCGCATTGTTGAGGCGCGGAGGGCGGCCGATGCTGCTGAA TTTGATGACGGTTTTGTCAGATCGAAGCTGCGGGCTCGAGATGAGTATGATGATGGGGATTATGATGACGATGAGGATGT GGCTGAGAACGGGAAGGTGGAGGAGGTGAAGAAGGTGAAGGTGAAGAAGCCGAAGAAGCCTAAGGTGACTGTGGCGGAGG CGGCGTCGAAGATTGATGCTTCTGATCTGGAGACATTTCTCGTTGATATATCGGCTTCGTTCGAGAATCAGCAGGATATT CAGATGATGCGGTTTGCGGATTATTTTGGACGTGCTTTTTCTGCTGTGAAAGCTTCTGAGTTTCCATGGGTGAAGTTGTT CAGGGAGTCTCCTGTGGCTAAGATTGCTGATGTGCCTCTTTCTCACATATCTGATGCTGTATATAAGACAGCAGCTGACT GGATTAACCACCGTTCTCCTGAGGCACTTAGTTCCTTTGTGCTCTGGTCCTTAGATAGCATTCTTGCTGACCTGGGGAGC CATCAAACTGTGGCCAAGGGTTCCAAAAAGGCTGTGCAACAAGCAACTTCAAAATCTCAGGTTGCAATATTTGTTGTTTT AGCAATGGTATTGCGTCGGAAACCTGATGCCCTTATTACTGTATTGCCCACACTGAGGGAGAATGCAAAGTATCAAGGAC AAGATAAGCTTCCCGTGTTTGCATGGATGGTGGCTCAGGTTACAGCGGGAGATCTCTCAGTAGGTTTGTATGCTTGGTCA CGGAATCTCCTGCCTATAGTGAGTGGAAAAAGTGTTAATCCCCTATCGAGGGATTTGGTTTTGCAGCTAGTGGAAAAAAT CTTGTCTACCCCTAAAGCACGGCCTGTTTTAGTAAATGGTGCTGTAAGAAAAGGGGAACGGCTGATTCCTCCTTCTGCAT TTGAAATTTTGGTCCATGCTACTTTCCCTTCATCTTCAGCTAGAGTAAAGGCTACAGAAAGATTTGAGGCAATATATCCC ACACTGAAAGAGGTGGCTCTTGGTGGTTCTCCTGGAAGTAAAGCAATGAAACAAGTTTCGCAGCAGATATTCAGTTTTGC TATCAGAGCAGCAGGAGACAACAATCCTCAGTTATCTAAAGAAGCAGCTGGTATTTTTATTTGGTGTTTACGCCAAAGCA CTGAATGCTACAAGCAATGGGAAAAAGTTTATGAGGACAACATTGGAGCAAGCGTTTCGGTTCTAAAGAAGCTAACTGAT GATTGGAAGGAGCAATCAACAAAATTGTCTCCTCATGAGCCACTGAGGGAAATCCTAAAGAATCTTAGGCCAAAGAATGA GAAAGCATTGGCTACTGAAACAGATCCAGCTCGTCAAGCCCTCTTCAAGGATGCGGATAAATATTGTAAGATACTCTCAG GAAGAGTTTCTCAAGGCCATGGGTGCAGGACATGTTTGACCTTTACAGTTCTTGTTGTGGCTGTGGGTGCTGTTCTTTTG TCCCCCAACATGGAATCTTTGGACTTCAAGAAGCTCTCTGTAGTTTTCAACTCTCAGTTCTGA
Protein sequence (LotjaGi4g1v0358900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEENHAAAAFESNDHGWQKVTYVKRQSKKKAANGVSDSRVKVAPNGTVAGGESIFRSLELESEDRRRRIVEARRAADAAE FDDGFVRSKLRARDEYDDGDYDDDEDVAENGKVEEVKKVKVKKPKKPKVTVAEAASKIDASDLETFLVDISASFENQQDI QMMRFADYFGRAFSAVKASEFPWVKLFRESPVAKIADVPLSHISDAVYKTAADWINHRSPEALSSFVLWSLDSILADLGS HQTVAKGSKKAVQQATSKSQVAIFVVLAMVLRRKPDALITVLPTLRENAKYQGQDKLPVFAWMVAQVTAGDLSVGLYAWS RNLLPIVSGKSVNPLSRDLVLQLVEKILSTPKARPVLVNGAVRKGERLIPPSAFEILVHATFPSSSARVKATERFEAIYP TLKEVALGGSPGSKAMKQVSQQIFSFAIRAAGDNNPQLSKEAAGIFIWCLRQSTECYKQWEKVYEDNIGASVSVLKKLTD DWKEQSTKLSPHEPLREILKNLRPKNEKALATETDPARQALFKDADKYCKILSGRVSQGHGCRTCLTFTVLVVAVGAVLL SPNMESLDFKKLSVVFNSQF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 545 | 545 | - | – | |
| PANTHER | 5 | 579 | 575 | 5.7E-294 | – | |
| PANTHER | 5 | 579 | 575 | 5.7E-294 | ||
| MobiDBLite | 27 | 46 | 20 | - | – | |
| Pfam | 114 | 558 | 445 | 1.9E-19 | ||
| Phobius | 546 | 564 | 19 | - | – | |
| Phobius | 565 | 580 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0358900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…