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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0369300 |
| Transcript ID | LotjaGi4g1v0369300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Salt-inducible protein, putative; TAIR: AT4G14200.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|A2RP72|EFG_LACLM Elongation factor G; TrEMBL-Plants: tr|K7KQC0|K7KQC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0369300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74876347..74882524) extracted from Lotus japonicus Gifu genome v1.2.
GTTATTTTCAATTCTATTTTCTTTTCTAGTTTTTACAAAATACTAACATGAGCTGTCATGGAACCCACCGTCACAGCCCT GTGACTGTGACCATTCTACTATTCACAGCGGTGGAGAGGTTGTCACGGGCACATGGCACGTGCAACACATGTGGAATAAC AGTTATACCCTAACGAACGAAAAGACTCAAATATCCTTTTCATCTACATTGGAACCAGTAGAAACAAACACAGAGAGAGA CACTGTAATTTGCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCGTGTCGTATGAACAGTGACCTACGTTGT GGGTCCCTCCCTCTGTTTTCTTCTTCCTAACCACTGTCACACCCTCTTCATAGTTCTCTAATCTCCTTCCATTCCTCTGT TTTTCTTGCTCCACCATTTTCTTCTTCTTCTTCTTCTTCTTCGCTTTCTGCTTCCTCCATTTTGGTTGACTTCTTCCTCT GTTTCGTTGACTAATGGGTGACCAAGATCAAAGAAGAACTCACACTTCAGGTGCATTTCACTTTTTCTGCATTTTCTCTT TCAATTTCTCTCTCATTTCTCACTTCTTTCGATTTTTATATTATTTCACTTTCTGGGGTTTGTTTTTTTGTGTTTTTCTT ACGGAAAGTCTCTGTCTTTTTTGTGGGTTTGGAAATCTTGTGGGTCTAGTGAAGATTTTTATGGTTTTTTGTTTATGATG TTGAAGGGCATGAGAGTCATGGAGTTCATGTGTGTCGCAAATGTGGGTGGCCATTCCCGAATCCACATCCAAGTGCCAAA CACAGACGTGCGCACAAGAAGATCTGTGGAACCATTGAAGGCTACAAATTGGTTGGTTCAGATGATGAACATGTTTCTGA TGATGATTTCAAGACACCAGGTATGCAATGTTCAACATTGTTAACTGTTATTGACTTAGTGTTGTTGTTTTCTTGTCTAT ATATATATATATAAATGGTCTTTGGAATTGATACTAAATTCCAAAATGTGTTGATGTTTTTTTTAGGTTTGGTTGCGTCA GGTTCAAGTTCAATTGCCTTGGACCTGGTCAACAATGAGAAGGGTAATGATGGAATTGGGGAAAAGTTGGTTAGATCAGA AAGATCAGAAGATGATGTGTTTTCAGATGCGGTTGCTGAGTTTATGGATAGTGGATTGAGTCCAGGAATTAAGGAGCGTT TACAAGAAGAAAGTTTGGACTCAGGTACTGATGTGGAAGGAGTCCACATTAAAGAACAAATTCTTTCAGGGCCTTCTGAG CACAATGTGTTTAATGGTAACGCGATGGGTTTTTTTACACTCGCGTCATCATCTCTTTATTAAGATTTGCATTGCTTGAC TTTATTGAATGAGTATGGAGTTGCACAATAAAGCACTTTTGTCTGATTAATTAAGAATTTTGGGAAGTTTGTTTTTACAT GATGTATGAGTGTCAAGATTAATGGTTGTGAAAATTCCATAAAGCGGTTTATTGGTTTTATTATCTGTGCATGTTAATTT GATTGGTCAACTCAGTCCTAGTTAGCAAAATTTTACATCAGAATCTGGATCTGTTCACATGAGTCCTACATCACGAGTGT TATACATGGAGGTAACTGGAAGTGCCCTATTCGTCTTGCCTTCTTTTGGTCAATGAAAAGTTACCTTTTTATGAGTGTTA TCTGAGCCTTTATCGTTAAAGCTTTTGAATTACCTTGTCACCTTGTTGTGAATTCAATGACTTAATGCTTGGCAGAAGAG TTATTACAAAAAAGAAAGTATGTTTGATTTTGCAACAGCAATATTTTTTTTACTCTACCAATAAATGGTAAGAACTGGTT GGGAATGGTGTTTTCACTTTTCAGACCTATATAAGCTAAAATGCAAAGATATATCTGTTAATTAGAAAATCAACATAATA TATATTTTAAGAATTCCATGGTGTTAAAATCTTTTGGAAGTGTATTTATAATTATCATTTTTTTAAGCTCCAACATTTGT ATCTTCTCTGTGGTTCTATCATGTCTTATAATTCATTTCACAGCTGCAGATGTTAGTCCATTAATTGTCAACTCAAGCAA TGATGGCCAAATTGAAAATCCTGAAAGTTTGCAAAGTGCAAGTGTTGAAGTAGAAGACAAAACAGTGGAGTTGCAAGGTC CATTGTCAAGCTCTACCGTTGATTCATTTTCAAGTTTAGTTGCAGATTTGGGGACTAAAGAATCGACTGTTGCGCACGGT GACGATTTTGTTGGTTTGCCAAGTGACTCGCAGCCCAGCAACGCTGAAGTTATACCAGATGTATTGGTAGAAAAAAATAT CCATGCTGTTGAAAATGTGGCAGATTGCAGTTCTATGTGTGTTGAAGAGGAAACTAATTTGGAAGGAAAGAATGAGATAA AATCAGAAAAAGTCATGGTTGAAATTGTCGACTCATCTGATAAAGAAGTGTCTGAAATAGCAATTAGTGATGCTGTTTCC TTGGACCATCAAGTGGGTGATGGAGTTGGTAATCTGAAGGAAAAGAATGGTGCTGTTCTCGTTTCATTGCTTCCCCAAGA TGACTTCCCTCTTGAGTTAAACCCGTCCGTAATCACTAATGATGCTCAGGTAGAATCTGCACACACCACACAGTTTGCTA TACTTGATGATAGACCTGATGCAACATATCTTCAGAGTGATTATGGAGATCACGAAGGAGTGATATTCCCAAATCCTTCA AGCCTACACTTGTCTGACTCATTGGAAGACAAGGAAGATGGATTAATGGGAACAATTACTGAAGAAGATGATTTTCATTT CATCACAAGCCAATTAAGTGAGAAAAGTAATATCCTCTCTTCAGATATGCATGTTATGGATAGTAGCGTGAAGTCAGAGC AGGTCAGCAGTGAGCCTATGACTGAAGACATCACACAGTTTGCTACACTTGATGATAGACCTGTTGTAACATATCTTCAA AGTTATTATGGAGATCACAAAGGAGTGATATTCCCAAATCCTCCCAGCCTACACTTGTCTGACTCATTGGAAGACAAGGA AGATGGATTAATGGGAACAATTACTGAGGAAGATGATTTTCATTTCATCACAAGCCAATTGAGTGAAAAAAGTGATGTCC TCTCTTCAGATATGCATGTTATGGATAGTAGCGTGAAGTCAGAGCAGATCAACAGTGAGCCTATGACTGAAGACATGCAT GCTGAAGATTGTACTGAATTATCCCCAGTCAAGCTCACAGTTGAAAGTTATCAAAGTTCGCATGAAAGTGGTTTGTATAT GAATGCCATGAAAACTGAGGTGAATGAGAATCATGTGGTTCATCTTTCTGAAGACCAGGGACCTGTTGGCGTTCAAAAAA ATTCTCCACAGATAAGTTTAACTGAAGGTGATTCAGTGGCCCCATCAAATGAGAGTCAGAGGGATGCATCTGTTGGGAAT GCAACCGGTGAAACAACTAGTGTCATTAACATAGGCAATGTAAGCCATCATGAGGAAATCATAACTGAAGTAAATAATGT AGCTTTAGATGGGCAGGGTGGAGAAGCTAATGTGGGAAATGATACTCAGATTATTTTGAATGATCTTCAACCCAGTGACC TCTTGCAACCATATGTCATGCAATCAAGTGACGTATTTAAGAGTGATGATGCTGGTGAAATGGGTAAAACCGAACAATGT GTTATAACTGATGCTCAATGCAAAGAAAATTTCACAGATAGAGATACTTCATCGTTTAACTCTTCTAGCAGTCATTTTGA AATCCCAGTTACTTCAGATGCTGGAATTGATGGCCCTGCGGGAAAGTCTAATGGTACAGAATGCAAAGATATAGATTCAC TATCAGGTGCCCGGGAAGTCATGAAAGAAGATGAAATCAATGGCCAAATCAAACTAAGTGAAGAATGTGACAGATCTGCT GGAACTTTTGCTGATTCACACGAAGCACGAGATGCAGAACTATTAGTGAAGGCTGCAGAAGACCTTGCCAGGAAGTATAC ATCATTTACTTCTTTAAATACTGAGCCTTCTGCTCAGCATGATGCTGCTGTTGAAGGTAATCCAGGTGGAGAACATAGTG AGGATGTGACTTTGGTTACTGCTGTGCCTGTTCAAGATCAAAGTGGTAATAATTTGGTTAAACATAGTTCATCTGGATTT GATGCTTCAGTTTACTCTAGTAGCCGTTGTGACAGTTTGGAAGGCCACTGGGGTTCTGTTTCAGGTATATATATCTTTTT GGTTTGTAACTGAATGCATTTTCACATTATAGACACATCATATCTGTTAGGCAATTGCATTATACTAGGCTGGTCATTGA AGCCAGCTAATATGTCTGGTATGGTGCAACAGGAAACCCTAGGATCAATTCTGGTGGAGTAAAATCAATTCTGGATGAAA ATACTGATGTTTGTGAGCCAATTTTTAGAATTGATTTCTGAACCGTAATTAATTCTTGTAGAAGCTAGAGTGTAACTTCT TTATTGAACATAATCAATTGTGAGAACTTACAACTGCATTTCACAACATTACCCAACAAAACTCACGTTTTCATAAATGT ATCCAAACATAAATCACTTCATTTTCAAATCACTTCTACTGTAGCCAATTTTACCAAAATCAAGTGTGACAAATGTTAAT CCAAACATGCGCCAAGAGAGGTTATCTGTAGATCTTGGTACTATACTGAAATAGTATTCATTCGCCATGCTTTCCTTTTC TTGCTACGTTCTTAATTGGAGATTAATGACTCATACACATTAAACATGTCTCCCGAACCGCTACTCTATCTTTAATATCC ATCTCCTGTAATCTCAGCCATAGGTCTCTTTGAATTCTAGATATTTTGAGCACTATACTATTCATGAAAATTCCTTCATT TGCATCTAATTTTACAGAAGTTCTGGTTCATATGGGGTTGAATTGATCAAGTGATACTGCAAATTGCATTTGTCGCATAG TTGATTCTTGCATTTCTTTCAACCTTATTGCCTTGCTAAATTTGTATAAACCACTAAAGCTAAAATAATAAAATGGGCTT TTGTGCAAAAAAAAATTGGTCTTAACTATTTCGTGATCCATTTAGCAGTTTTCTCTATGCAATCCAATGCACCATCGGGG ACTGATACTGAAATTTTACCATCAACCGGTTCACTAGCATCAGCAGAGGCGGCGGATAAATCCTACTTGAACATTCCAAA AGCAGAAGCTGCATCTGAGAGACAGCAGTCCGGAAAATCAGAAATGCTCGAACCTCCGTCGTTCATGACATTGGTTGAGT CTAGCCATGTGGTTAGCCTTAAAGGTGCTGCTGCTTCAGAAGTCCAGAAATCACAACAGCCAGATTCCACTTCACAGGCT GGTTGGTTCCCCACTCAAACTCAGGTTAATAATGAGTCTCAAGGGAGAAAGAAGAATGAAGAAATAATAGCCAAGGTAAC AAACTGGAGGAGCAACAGCAAGGGGCACACACCTCTAAAGAGCCTATTAGGCGAGGCTGCAAATAGCAGCAGCAAGCCTG AATCTCCAAAAATGGAAGAACATTCAGTGACTCAGAAGAATGGTAACAATGGTTCTGGATTGAAAACTGTTAACTCTATT CTGGGTCCTGAATCCCCTGGAGATCAAGTGGTGAAAGGAGATGCTGCAAAAGAATGGAACTCTCCGGCAAGATATCCTGC AGGCATCAAGAGAGAAAAAAGCAAAATCAAGAGCAGACCATTCTGGATACAATTGGTGTGCTGTTCATCAGTGGATCCTC AACGAAGGTAGAAAATTGCGGTGGTCATGATGTCTTACTCACTGCTCTATATTCTGATGTGCTGATAGATTCTGCTTCAT TGACATGCTATTCGCGGTATTTTATTTTTAAATGGTTTCCAGAGATTTTAGGTGTATATTTTAATGTGTGATCTACTGAT TCTCCTAGCCTCCTAGGAGTTTGGTTGTATATGTTGACCATCTTCAGGTGTTATTTTTCCCTACAATCTTAATATGTGTC TTTATCATGTCTCAATGCGTGTTTGGAAATTATTCTACAATTGATTCTAAAGTCAGAATCAATTCTTGGGAGAAACTGTG AGAAGCTTATGGGTTTCAGAATTAATTCTCGAGAAACTTAAGCTGATCCAGTCTGCTATTAGTTTGATCTAAGCTGCTGA AAGTTTCTATCCTAAGTG
CDS sequence (LotjaGi4g1v0369300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGACCAAGATCAAAGAAGAACTCACACTTCAGGGCATGAGAGTCATGGAGTTCATGTGTGTCGCAAATGTGGGTG GCCATTCCCGAATCCACATCCAAGTGCCAAACACAGACGTGCGCACAAGAAGATCTGTGGAACCATTGAAGGCTACAAAT TGGTTGGTTCAGATGATGAACATGTTTCTGATGATGATTTCAAGACACCAGGTTTGGTTGCGTCAGGTTCAAGTTCAATT GCCTTGGACCTGGTCAACAATGAGAAGGGTAATGATGGAATTGGGGAAAAGTTGGTTAGATCAGAAAGATCAGAAGATGA TGTGTTTTCAGATGCGGTTGCTGAGTTTATGGATAGTGGATTGAGTCCAGGAATTAAGGAGCGTTTACAAGAAGAAAGTT TGGACTCAGGTACTGATGTGGAAGGAGTCCACATTAAAGAACAAATTCTTTCAGGGCCTTCTGAGCACAATGTGTTTAAT GCTGCAGATGTTAGTCCATTAATTGTCAACTCAAGCAATGATGGCCAAATTGAAAATCCTGAAAGTTTGCAAAGTGCAAG TGTTGAAGTAGAAGACAAAACAGTGGAGTTGCAAGGTCCATTGTCAAGCTCTACCGTTGATTCATTTTCAAGTTTAGTTG CAGATTTGGGGACTAAAGAATCGACTGTTGCGCACGGTGACGATTTTGTTGGTTTGCCAAGTGACTCGCAGCCCAGCAAC GCTGAAGTTATACCAGATGTATTGGTAGAAAAAAATATCCATGCTGTTGAAAATGTGGCAGATTGCAGTTCTATGTGTGT TGAAGAGGAAACTAATTTGGAAGGAAAGAATGAGATAAAATCAGAAAAAGTCATGGTTGAAATTGTCGACTCATCTGATA AAGAAGTGTCTGAAATAGCAATTAGTGATGCTGTTTCCTTGGACCATCAAGTGGGTGATGGAGTTGGTAATCTGAAGGAA AAGAATGGTGCTGTTCTCGTTTCATTGCTTCCCCAAGATGACTTCCCTCTTGAGTTAAACCCGTCCGTAATCACTAATGA TGCTCAGGTAGAATCTGCACACACCACACAGTTTGCTATACTTGATGATAGACCTGATGCAACATATCTTCAGAGTGATT ATGGAGATCACGAAGGAGTGATATTCCCAAATCCTTCAAGCCTACACTTGTCTGACTCATTGGAAGACAAGGAAGATGGA TTAATGGGAACAATTACTGAAGAAGATGATTTTCATTTCATCACAAGCCAATTAAGTGAGAAAAGTAATATCCTCTCTTC AGATATGCATGTTATGGATAGTAGCGTGAAGTCAGAGCAGATCAACAGTGAGCCTATGACTGAAGACATGCATGCTGAAG ATTGTACTGAATTATCCCCAGTCAAGCTCACAGTTGAAAGTTATCAAAGTTCGCATGAAAGTGGTTTGTATATGAATGCC ATGAAAACTGAGGTGAATGAGAATCATGTGGTTCATCTTTCTGAAGACCAGGGACCTGTTGGCGTTCAAAAAAATTCTCC ACAGATAAGTTTAACTGAAGGTGATTCAGTGGCCCCATCAAATGAGAGTCAGAGGGATGCATCTGTTGGGAATGCAACCG GTGAAACAACTAGTGTCATTAACATAGGCAATGTAAGCCATCATGAGGAAATCATAACTGAAGTAAATAATGTAGCTTTA GATGGGCAGGGTGGAGAAGCTAATGTGGGAAATGATACTCAGATTATTTTGAATGATCTTCAACCCAGTGACCTCTTGCA ACCATATGTCATGCAATCAAGTGACGTATTTAAGAGTGATGATGCTGGTGAAATGGGTAAAACCGAACAATGTGTTATAA CTGATGCTCAATGCAAAGAAAATTTCACAGATAGAGATACTTCATCGTTTAACTCTTCTAGCAGTCATTTTGAAATCCCA GTTACTTCAGATGCTGGAATTGATGGCCCTGCGGGAAAGTCTAATGGTACAGAATGCAAAGATATAGATTCACTATCAGG TGCCCGGGAAGTCATGAAAGAAGATGAAATCAATGGCCAAATCAAACTAAGTGAAGAATGTGACAGATCTGCTGGAACTT TTGCTGATTCACACGAAGCACGAGATGCAGAACTATTAGTGAAGGCTGCAGAAGACCTTGCCAGGAAGTATACATCATTT ACTTCTTTAAATACTGAGCCTTCTGCTCAGCATGATGCTGCTGTTGAAGGTAATCCAGGTGGAGAACATAGTGAGGATGT GACTTTGGTTACTGCTGTGCCTGTTCAAGATCAAAGTGGTAATAATTTGGTTAAACATAGTTCATCTGGATTTGATGCTT CAGTTTACTCTAGTAGCCGTTGTGACAGTTTGGAAGGCCACTGGGGTTCTGTTTCAGTTTTCTCTATGCAATCCAATGCA CCATCGGGGACTGATACTGAAATTTTACCATCAACCGGTTCACTAGCATCAGCAGAGGCGGCGGATAAATCCTACTTGAA CATTCCAAAAGCAGAAGCTGCATCTGAGAGACAGCAGTCCGGAAAATCAGAAATGCTCGAACCTCCGTCGTTCATGACAT TGGTTGAGTCTAGCCATGTGGTTAGCCTTAAAGGTGCTGCTGCTTCAGAAGTCCAGAAATCACAACAGCCAGATTCCACT TCACAGGCTGGTTGGTTCCCCACTCAAACTCAGGTTAATAATGAGTCTCAAGGGAGAAAGAAGAATGAAGAAATAATAGC CAAGGTAACAAACTGGAGGAGCAACAGCAAGGGGCACACACCTCTAAAGAGCCTATTAGGCGAGGCTGCAAATAGCAGCA GCAAGCCTGAATCTCCAAAAATGGAAGAACATTCAGTGACTCAGAAGAATGGTAACAATGGTTCTGGATTGAAAACTGTT AACTCTATTCTGGGTCCTGAATCCCCTGGAGATCAAGTGGTGAAAGGAGATGCTGCAAAAGAATGGAACTCTCCGGCAAG ATATCCTGCAGGCATCAAGAGAGAAAAAAGCAAAATCAAGAGCAGACCATTCTGGATACAATTGGTGTGCTGTTCATCAG TGGATCCTCAACGAAGGTAG
Protein sequence (LotjaGi4g1v0369300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDQDQRRTHTSGHESHGVHVCRKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLVGSDDEHVSDDDFKTPGLVASGSSSI ALDLVNNEKGNDGIGEKLVRSERSEDDVFSDAVAEFMDSGLSPGIKERLQEESLDSGTDVEGVHIKEQILSGPSEHNVFN AADVSPLIVNSSNDGQIENPESLQSASVEVEDKTVELQGPLSSSTVDSFSSLVADLGTKESTVAHGDDFVGLPSDSQPSN AEVIPDVLVEKNIHAVENVADCSSMCVEEETNLEGKNEIKSEKVMVEIVDSSDKEVSEIAISDAVSLDHQVGDGVGNLKE KNGAVLVSLLPQDDFPLELNPSVITNDAQVESAHTTQFAILDDRPDATYLQSDYGDHEGVIFPNPSSLHLSDSLEDKEDG LMGTITEEDDFHFITSQLSEKSNILSSDMHVMDSSVKSEQINSEPMTEDMHAEDCTELSPVKLTVESYQSSHESGLYMNA MKTEVNENHVVHLSEDQGPVGVQKNSPQISLTEGDSVAPSNESQRDASVGNATGETTSVINIGNVSHHEEIITEVNNVAL DGQGGEANVGNDTQIILNDLQPSDLLQPYVMQSSDVFKSDDAGEMGKTEQCVITDAQCKENFTDRDTSSFNSSSSHFEIP VTSDAGIDGPAGKSNGTECKDIDSLSGAREVMKEDEINGQIKLSEECDRSAGTFADSHEARDAELLVKAAEDLARKYTSF TSLNTEPSAQHDAAVEGNPGGEHSEDVTLVTAVPVQDQSGNNLVKHSSSGFDASVYSSSRCDSLEGHWGSVSVFSMQSNA PSGTDTEILPSTGSLASAEAADKSYLNIPKAEAASERQQSGKSEMLEPPSFMTLVESSHVVSLKGAAASEVQKSQQPDST SQAGWFPTQTQVNNESQGRKKNEEIIAKVTNWRSNSKGHTPLKSLLGEAANSSSKPESPKMEEHSVTQKNGNNGSGLKTV NSILGPESPGDQVVKGDAAKEWNSPARYPAGIKREKSKIKSRPFWIQLVCCSSVDPQRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1014 | 1014 | 1.1E-204 | – | |
| PANTHER | 1 | 1014 | 1014 | 1.1E-204 | – | |
| ProSitePatterns | 22 | 42 | 21 | - | ||
| MobiDBLite | 496 | 534 | 39 | - | – | |
| MobiDBLite | 499 | 534 | 36 | - | – | |
| MobiDBLite | 624 | 659 | 36 | - | – | |
| MobiDBLite | 624 | 640 | 17 | - | – | |
| MobiDBLite | 866 | 980 | 115 | - | – | |
| MobiDBLite | 868 | 896 | 29 | - | – | |
| MobiDBLite | 908 | 936 | 29 | - | – | |
| MobiDBLite | 945 | 966 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi4g1v0369300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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