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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0374900 |
| Transcript ID | LotjaGi4g1v0374900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Translation initiation factor eIF-2B subunit gamma; TAIR: AT5G19485.1 transferases/nucleotidyltransferase; Swiss-Prot: sp|Q54FQ8|EI2BG_DICDI Translation initiation factor eIF-2B subunit gamma; TrEMBL-Plants: tr|V7CR36|V7CR36_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0374900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75393595..75398301) extracted from Lotus japonicus Gifu genome v1.2.
AAAATTATTTACATAAATGAATATTAGTGAAGCGTGGGTTGTGTAGTAATTGAGATTTGAGAGAAATAGTAGAAAGAAGG AAGAAAGAAGAAAAAGAAAAAGAAAACCCTCCGAAAATCTCAAACCCTGTTTGTTTGTTTGGTGCGACGATGGATTTCCA AGTCGTCGTTCTCGGCGGTGGCGTCTCCAAGAACCTCCTCCCTCTCGTCTCTCAGGTACCTAACCTACCTTCCTCAATCT CATTCTTCTCCTTCAATTCGCAAAATCAATTTCAATTCGCTTTGCATTTGCAGGAGCTTCCAAAAGCGTTACTTCCGGTA GCGAATCGTCCAGTTCTCTCTTACGTTCTTGAGTTACTGGAGCTCAGCAACCTCAAAGATCTCATTGTGGTACTTACTCC ATTTTTCTCTTCTTTCTTTAATTTTTGTGTGCATATTTCATAGGTAGGGCAAACAATACAAAATTAGTAGCAGTAGTGAG TGTTTTGATTTGATTTGAGTAGGTAGTTGAAGGCGAAGACGCCGCTCTTCATGTTGGAGGTTGGATTTCTGGAGCTTATG CTGATCGCCTCCACGTCGAGGTAATAATCCATATAAGATTCAGTTAAATCATTAAATTGTTCTTCAATTAGTGACACCTT ATTCAATTTTTACCTTAATGTTTTGATAATCTGTCCAACTGTGTGATTTTATTGATTGTATTTGAAAAATGTTCCAGGTT GCTGCGGTTCCTGAGGATGTGGGAACAGCCGGTGCGATTCGGGCCATTGCACGCCACCTAACTGCTAAAGACATTTTGGT GAATAACTGAATATATATCCCTTTACTCTGACTCGTAACTTGTAGAGGTCGAATTAATGTTGATCGTCATGGTTGTGTTA ATTTTCTGCAGGTTATTAGTGGTGATGTTGTTTCTGATGTGCCGCTTGGTGCTGTTGCAGCTGCTCATAGACGGCATGAC GCGGTTGTCACTGCGATGCTTTGCCCTGCACCTGTTAGTGGACCTTCGGAGTCGGTCTCGTCTGGCGGGAAGGATAAAAC CAAGAAGCCTGGACGCTATGATTTAATAGGGCTGGACCCAACTAAACAGTTTTTACTTCACATAGCAACTGGTTAGATCT ATGCCTTTCCCTTACGTATGGAATTTACTGTTTGTGTTTTGAGGTAGATTCTCACAAGTCACAGCTCTTTTTCAGGAGCT GAAGTTGAAAAAGATCTTCGAGTTCAGAAGAGCATTCTCCGTGCAGCCGGACAGGTGTGTTTTTTTCTTCCTTGTCTCTC AACCTGCGTAGAATTTATTTGATGTTAAAAAACCATGGCTTTTCTAGTGTGAAAATTAAGTGTCTGCTCTAAAACAGTTC TATCAATCACATTTTTCTGCTATTTGCAATTATTGGCTTATTGCATTTCTTATTCAGCACATTGTCCAAAATTATTAATG GATTTCTTTTCTGTCTAGAGATGGGGAGTTATTATTATGCGTACGTTCAGTCTAAGAAAAATGTTATACTGTATAGAAAT AACCTCTTTAAGTGGAAATATGAATTTGTCATCCGAGGAATTGAAAATTGAATGAAAGACTTTTGCAGGTTCTTATTTCT CTTTGTTTTTTCTTACTATTTTTTTTTATCATGTGTCCCCCATGTAGATAGAAATAAGAGCTGATCTAATGGATGCCCAC TTGTATGCATTTAAAAGGTATATTCATTTACATTTTAGCTGCCGCTATGTTCTAAATCTTAAATTACTCATATGATTGTA TCCTGAAAGTCTGAAAATTAATTTTCTTGCAGATCAGTTTTACAAGAAGTTCTAGATGAGAAGGTTGCATTTCATAGCTT GAAGCATGACGTATTGCCATATCTTGTCCGGAGCCAACTGGTTAGTTGTTTAATGTTTTTGCAGAGATGGGTTAAGGGAC ATTACACTTTTAAGGATTCTAACCTGGTTCAAATTTTCTAAATGAGAGTTAGAAATCAGAAGTATTATTAAATGGTAGTC CGCAAGCAGAAGAAAATGGAAATGAGAAGGTTATTTCTCAAAGCAATCAGCAAATGCTATCTCAAATACTTGCTAATGCA TCTGAACTGACTTTTCATCAACGACATGCTCTGGGTCCTAATGGTTATGGTCCTACTTCTGCTCGAAAAACCCATAAATG CTGTGTTTATATTGCTGGAAGTGGCAAGTACTGTGCTCGTCTAAATTCTATACAAGCATACAGCGACATAAACAGAGATG TGAGTGAGATACATTGTTACGGCTTTAATCCAATACTTGATGTTTTATATTTTTCTTTGGTAACAGTTTTTCTTGCTGCG GTTTTTATTCATTTTCTTACTTTGACAGTTAATAGGAGAATCCAATCATTTGTCAGGGTATTCCTTCTCCGCTCATAATA ACTTTATCGATCCTACTGCGGAGCTGGGGGCAAAAACCACTGTGAGTTAAACGCACTGCAGAGGACTTAATTGTTCTGTC TGGTAATCTGGTATACAGTTTCAGAAGCATTGTTTTTGGTTTTCCCATTTTGAAGTTCCCACATTTGTGATTTTAGATTG GACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTAAAACGGTCTGTCATTGGCCGTCACTGC AGGATAGGTGCGAATGTTAAGGTGGGAAGTGCTATCTTATTAATTCAAATTAGCAGAAAGTTAGTTCTTGCATCTTTTGA TTTATCTGTGACAATGATTCATTCAATAATTTGATGTTTTCTTCCATTTGTTTTTATGTACGCAGATTGTTAATTCAGTA GTGATGAATCATGTTACTATTGGAGACTCTTGTTCAATTCAAGGTTCTGTTATCTGCAGCAACGTACAGCTCCAAGAACG TGCTGTGCTAAAAGATTGTCAAGTAATTCATCTCTCCTTTTCTTTGTTTTCTTTTCATTATTACAATTTTTCAATTGCAA TGTGACATTACCTGTATTTGCAGGTTGGAGCAGGTTTCGTGGTCACTGCTGGTAGTGATTACAAAGGGGAGGTGTTGGCT AAGAAATGAAACAGATGTGAAAATCCAGGGTGGGGAAATACATAGCAAATTGACTTTAAGCAGAGGTTCCAGCAAATTTT GAGACTTTTGCTGGCAATGCTTACAATCTGGTGATCTTGGCAGGAGGAGCGAGGAAATTCTAATACTTCCAATTTGTATT TCTATCTTTGCATTTTCATTTTCTTACTACGCAGTTTGAAAATGCCTTCACTTGGTGTTGAGGTTTTATTTGTATAAATG ACCACCCATTGTTTCCTCTTAACGATAGTTTTCTGCCTTCAAAATCCATGTTACAATAGATTTGATGGTTGGTGTCTAAT TGCTGTAGTAAAGTGGTATGATCCTGAGCCATCAGTTTTGTATTGATCAAATATATAGTACTATTGAGAATGGTGATAAT GTTGAGGATGACTTTGTATTTGCTTGGGTGGCTTGCATGTCACTTCATTGATCTTTCAAATTCATTCGTCTGTCAGTATA GTTTTCCATCAATATAAATTTGGTGGTGCTTCAATTTTTTAAAGATGATTTTGGTAAAAAATTTAAGAGGACTAATGTTA CTTGATTATCGCCCAATACATGCAACCTGGTCATGTATATCCTTGGATTGCAGTAAAGCTGAAATGAAAGGAACAAGATA GAGTTTTTTGAAGAATTTAATCTAACTCATTGATCTTGTGATCATTGATACTGATCCATATATATATAGAGTGCAATTAC AGGAGCTATAGAAGCTTACTAACTGCAAACTGATCAAAGCTATAGAAGCTGACTAACTGCAAACTGATCAAAGCTATAGA AGCTAACTAACTAATAACTGGTCAACAGAAAATGAACTATGTAACTGACTAAAAACTAACTTCCTACCTCATAACTAACG CTTACAAGCAAAAAACTAAATAGCTTGATTTAATTAAACAAATAGAAACTATTAATCCGGGATTTTAAAGGTTTAGTGAG TAAGTGTGCCAATTGAGCATGAATAGAGATAGGTAGTAACTTGGTGAAAAAGACCAACTTGTAATTTCTCATAGACAACG TGATAAATTGATAATCAATTTCGATATGCTCTGTGAGTTCATGGAAGCTTGGATTGGCGATGATATGGCGAGCAGATTGG CTATTACAATTTAACAATGCATGTGAGATAGCTGCAGCCTGTAGATCATGAAGGAAACTCGTGGGTTAATATGTCAACTC ACCCTGTTTTAGACTGCTCATCTCGCACTGTTGAGTGTCAATAACTCACAAATCATAAATTTTTATTTTTAACATGCCAA CTCGTGGTAAAACAAGGCAAGGTGCATTATCGACCTACTTCTCAAATATGAGACTGGGCGGGTTGACAGTTGGGCGGGGA CTCTGCGGTGTAGGCTGGCCTGTTTTGCCACATCTTAACAAAATTTATATAAACATAAGGTTGACTTTTGAGAACACTAA CTTGTTGATGAGCTATGACATCTCAGCCCTACCCCCCCAATCATGGAGAACACTCTTATCGTCTAATAAAATAAGTCCCG TGCATAATGAGGCTATTATTTTAGTTTGATATCTGGATCCCATCTTCAAAAAACTTTGACCATATTCATAATTAATATTA GGCTTAAATACTCTAGGGGTCCCTGAAATTGTACCCCGTATCAAAATAAGTCCCTGAAATTTTTTTT
CDS sequence (LotjaGi4g1v0374900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTCCAAGTCGTCGTTCTCGGCGGTGGCGTCTCCAAGAACCTCCTCCCTCTCGTCTCTCAGGAGCTTCCAAAAGC GTTACTTCCGGTAGCGAATCGTCCAGTTCTCTCTTACGTTCTTGAGTTACTGGAGCTCAGCAACCTCAAAGATCTCATTG TGGTAGTTGAAGGCGAAGACGCCGCTCTTCATGTTGGAGGTTGGATTTCTGGAGCTTATGCTGATCGCCTCCACGTCGAG GTTGCTGCGGTTCCTGAGGATGTGGGAACAGCCGGTGCGATTCGGGCCATTGCACGCCACCTAACTGCTAAAGACATTTT GGTTATTAGTGGTGATGTTGTTTCTGATGTGCCGCTTGGTGCTGTTGCAGCTGCTCATAGACGGCATGACGCGGTTGTCA CTGCGATGCTTTGCCCTGCACCTGTTAGTGGACCTTCGGAGTCGGTCTCGTCTGGCGGGAAGGATAAAACCAAGAAGCCT GGACGCTATGATTTAATAGGGCTGGACCCAACTAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGA TCTTCGAGTTCAGAAGAGCATTCTCCGTGCAGCCGGACAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATG CATTTAAAAGATCAGTTTTACAAGAAGTTCTAGATGAGAAGGTTGCATTTCATAGCTTGAAGCATGACGTATTGCCATAT CTTGTCCGGAGCCAACTGAAATCAGAAGTATTATTAAATGGTAGTCCGCAAGCAGAAGAAAATGGAAATGAGAAGGTTAT TTCTCAAAGCAATCAGCAAATGCTATCTCAAATACTTGCTAATGCATCTGAACTGACTTTTCATCAACGACATGCTCTGG GTCCTAATGGTTATGGTCCTACTTCTGCTCGAAAAACCCATAAATGCTGTGTTTATATTGCTGGAAGTGGCAAGTACTGT GCTCGTCTAAATTCTATACAAGCATACAGCGACATAAACAGAGATTTAATAGGAGAATCCAATCATTTGTCAGGGTATTC CTTCTCCGCTCATAATAACTTTATCGATCCTACTGCGGAGCTGGGGGCAAAAACCACTATTGGACCACATTGTATGCTGG GGGAAGGTTCACAGATGGGTGACAAATGCAGTGTAAAACGGTCTGTCATTGGCCGTCACTGCAGGATAGGTGCGAATGTT AAGATTGTTAATTCAGTAGTGATGAATCATGTTACTATTGGAGACTCTTGTTCAATTCAAGGTTCTGTTATCTGCAGCAA CGTACAGCTCCAAGAACGTGCTGTGCTAAAAGATTGTCAAGTTGGAGCAGGTTTCGTGGTCACTGCTGGTAGTGATTACA AAGGGGAGGTGTTGGCTAAGAAATGA
Protein sequence (LotjaGi4g1v0374900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFQVVVLGGGVSKNLLPLVSQELPKALLPVANRPVLSYVLELLELSNLKDLIVVVEGEDAALHVGGWISGAYADRLHVE VAAVPEDVGTAGAIRAIARHLTAKDILVISGDVVSDVPLGAVAAAHRRHDAVVTAMLCPAPVSGPSESVSSGGKDKTKKP GRYDLIGLDPTKQFLLHIATGAEVEKDLRVQKSILRAAGQIEIRADLMDAHLYAFKRSVLQEVLDEKVAFHSLKHDVLPY LVRSQLKSEVLLNGSPQAEENGNEKVISQSNQQMLSQILANASELTFHQRHALGPNGYGPTSARKTHKCCVYIAGSGKYC ARLNSIQAYSDINRDLIGESNHLSGYSFSAHNNFIDPTAELGAKTTIGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANV KIVNSVVMNHVTIGDSCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSDYKGEVLAKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 460 | 460 | 2.1E-201 | – | |
| CDD | 3 | 220 | 218 | 3.34845E-70 | – | |
| SUPERFAMILY | 4 | 427 | 424 | 1.13E-35 | ||
| Pfam | 6 | 146 | 141 | 4.2E-13 | ||
| MobiDBLite | 142 | 162 | 21 | - | – | |
| Gene3D | 348 | 457 | 110 | 1.4E-19 | – | |
| CDD | 372 | 451 | 80 | 4.16159E-36 | – | |
| Pfam | 388 | 421 | 34 | 3.9E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi4g1v0374900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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