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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0377600 |
| Transcript ID | LotjaGi4g1v0377600.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein; TAIR: AT2G42590.1 general regulatory factor 9; Swiss-Prot: sp|Q96452|1433C_SOYBN 14-3-3-like protein C; TrEMBL-Plants: tr|I3SJQ1|I3SJQ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0377600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75646555..75651875) extracted from Lotus japonicus Gifu genome v1.2.
GGATGAGTTCTATACTTTTTACATTGATTTATCATGCTTTGCTCCATGATACTAATTTTTTTAGTTTGCAATATGGTCTT CCAATTTAAATGGATAGGGAAGCATCGTTTTTCTCATTCTATGATGATGTAATTGTTGAAAAAATATTAATAACAGGAGA AAAAGACATGAATACCTGTAAAAATTTCAAAAGAAAAAAAGTGATTCAGAAATTTCAATGCTTACCAAACACCAATCAAT TAGCCTCCCATTCAATCTCACTCACCACTCTCTGACGTGACCATCACATCTCACCACTTCATCCTTAAAACTGCAAGAGC GTGACAACCACTCTCTAAACAGCGCGTGGAAAGAATCCCTCCCCGACTACCATCCTGTGCCGTCGTGACCTGTCTCCGTG TCCCTCCCCAACCAAACCTTTGAAAACTTCAAAATACAAATTCCATAGACAGACACAGAGAAAGAGAGAGACAGAGAGAT TTCTAGAGAGAGAGAGAGAGTTTTGTAGAGAGAGAAACCTTGCAGATCGTCAATGGCGTCCACCAAGGAACGTGACAACT TCGTCTACATCGCCAAACTCGCTGAACAAGCCGAGCGCTATGAAGGTCCCTTCTCTCTCTCACCCATTTCCTTACAACTT CCAGTTTCTCATATAGTTTTTTTTTTCTTTTCAATATTTGATTCCTCTGCATAGAGATTTAAGTGATTGTCTCCACTGTT CTGAGCTTTAAATTTTTTCAATATTTTGTTTCTGGTTAGCTTTTTTTTTATATTTTTTTTACAATTTATTTGAATTTTTA TTTTTTTTGGAATTTAGAGGAAAACTGGAGTTGGGGTTTTGAAAATTTTTAATTTTACTAAGAAAAATTGAAAATTTATT TTTTATGTTTTTGTGGGTTAGAAATGGTGGAGGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAG AGAAACCTTCTGTCAGTTGGGTACAAGAATGTGGTGGGTGCTCGCCGGGCTTCGTGGAGGATTCTCTCCTCAATTGAGCA GAAGGAAGAAGCTAAAGGGAATGATGTGAGTGTGAAGAGGATAAGGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGTCCA ATATATGCAGTGATATCATGATTGTTATTGATGAGCACCTTATTCCATCGAGCTCTGCTGGTGAACCTAGTGTCTTTTTC TACAAAATGTGAGTGGTTTTTGCTCTTAGCCTAGCTCTATGTCTCTCTCTCAGAATTTAGGATTTCATTGTTTTGATTGT CTCCTTTGTTATTTGCAGGAAAGGAGACTACTATCGGTACCTGGCGGAATTCAAGTCTGGTGATGATAGAAAAGAGGCTG CTGATCAATCCATGAAAGCATATCAGGTTGGCTTGTGTTCAGACCTCTTGTATCTGTCTGTTTTAAAAGATCTTGATGTT TGTTATATCTGTCCTGCCTGGTAATTCATGATTCATGTCATGGATGATATGGTTGCTTGATATGTCTCTATTAAGTGAGG TTCAGTGAAGAATAAAGTGTTTCGGTTTAATTATCAAGTCTTACTTATTGGTATCTTTATATTTCTTGGGTGATGAAATT AATAAATTTCTGACAAAAGGACTTATATTATTGACCTGTGTTACTGGATAAATTGTGAATCAAAAGTCATTATTGGGGAT ATTAACTTTGAAGGGGTGTTTCTAATCCAGGTAGTCACTCAAATTCGTGACTTTTATCATAGAATTACCGATCTTACAAT ATTTACGGTGGATTTCAATCTTGTTTCCACAAAAGATTATCAGCTGATGAGATTGTGTGGAATCATCGGGAAATCTTATA GACAACAGAATTGTCGGTCTTTATAAGCTGAATTTGACAGGACTAGCAGCACACTAACAACCAAGTAAAACAAACCAATG ACCCAACAATCTGTGATGTCGACCCAGCTAATGATGTACTGTGATCTGTCTTCGTCTCGCTAGTCATGCCCTCCTCTTCT CTGTTTTTGTCTCTCACATTTTCATCTCTCTCTGTCTGTCAGCCCTCAACTATTGAAGCCTTGTCTATCATCTCTCTCTG TTTTTGTCCCTACCGGAACTCTCTGTCTCTTATTTATTTTGGGCCTTCTAAGTTCATATACATTCACTCTTTGACTTCCT GGTGAACTATACTTTTCCTTTTATGCTCTTTTCTTTTCTTACATAATTACTATGAAATATTAATATTAACATATTACTAA AACAATTACAAAAAAATATCTGATGACTTAAATTATTTATATTATTACATTTATTATTCAGTTGTATTATCAATTTATCA TAAATTTTATATCAAAATGTATTAATATTTTGTAGGATTGTGGTCCGTGTTATGATCCCATGTTTTACATTTTTTTCACT CCCTGAATTGACGTAGATTATTGATATTAGCTACCTCGATCCTAATGGTTCTTTATCACTTAGATTGTGTACTTATTAGG TAGGAAAAGCATAATTTGAGGATTCGAAGTTGATACAGGCTTGGTTTGTGAGTAAAATAAATGAATGGGTAGAGGAGTCA CTTTTACGTGTTCTGTTAATATTTGGGGAGAGGAAAAATAGGAGGTAGTGCTTATCATCAGGCATGACATTCATGACACC TTGTCTTTGTTTTATGACATTCATGATATCTGACATTTATTTAGATGAAGGCATCACCAATGTGACGTTTGCTGTTGAAT TGCCTAAGTATTTTTCCAACTGTTCATGTTTATCTGAACAAATCATAAATTTTGCAGTTGGCTTCCACTACAGCAGAGAC TGAATTACCTCCCACTCATCCCATTCGATTGGGCTTGGCTTTGAACTTCTCTGTCTTCTACTATGAAATTTTGAACTCTC CTGAAAGGTATACCAATTTTTTTTTTCATGATGGTATTATTGTTTAACATCCCAACTTCCTTTGTTCATGCACTAAATGT ATACTTAGTCTGTTTAATGGATTTAACATGGTACTCCTCATATTTCAGGGCATGTCACCTTGCTAAGCAGGCATTTGATG AAGCAATCTCTGAACTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAAC CTCACCTTGTGGACCTCTGACATCCCTGAAGAAGGAGGTAATCATTTATAGATATTAGTGTTCATTGCCACTATGTTAGT TGGACTTGGTCTGCAATGTAAATGAAATATATGAATTTTTTGTTTTATAGAATGTTCATTGGTATAGTCGGCATTAATGT ATGGTTATTGTGGTTGTTTGTTCATGGTCATGGCTATTGTGATTTCCTTTGTTTGATGTCTGTTTCATTTTTTGAGATAA GTTTATGCTTGTGGCCTGCTAAGTTTATCCCATGTTGATCAAAATTCCAGAATATTGAAGAAAAGCCTGTACCTAACAGT ATCAGTTGAAAAAGAAACCCAAACAATGAACAATCTGAGAAATCAGGCCAAGCTGACACTGCTAATTTCTTTTGGGTGCA ACAGTTAGAATTTTGATCTCATCGAAGAGCTTTTGCAAATGCTGAATCTCTTCATCTTTCTTGTGATCTTAGGCAACTAA ATCCTTGCAACCAAGAGCCAACTAAAATATATGTTTGATACAAACTCATTGCTTCATGTTTTACTTTTTACATTTTTCTC TAACACCTTTATTAAAATTATTTGATTCTAATGTCTTTTATTCTAATTTATTCTTTCTCGTTCTATTTTAAGTTGGTTAC AGAGCCTATCAACTATGCAATTTGTTTGTTCAACTATGTGTCAGTCATTGTATACATATTTGTTGATGTAGCTATGCAAT GACATCCCACGTGTGCTCAAAATCACACACCACAGTTCCTAGGGTTGCTTTATCATTCTAATCACACAAGAAAGCTTCTT GACGAAACACTTGCTAAGTAGCTCCCCTGCATTGAAAGATCAACATCATGAACAAAAGAGGAGCTCTCCATATACTATTT ACTACTAGCCAATGACCAAGTGGTCTTTTAAGCAGCGGTCAACTTATTTCCATCATGGTTTACTGTCTACTATGCTTATA TTTTGCTGTTGTTTCAGACTATGGGTATTTCTTCTCATTTTGGCCCCTATGGGAGTTTATTTAAGTTTATCCTATAGCAA AAACATTTATGCTATGTAAATAGCTTATGGCCTACCTATAAGCTGTTTTAAGCTTACTTTCATAACCTGTTTAGATTTGT TTATGAGTAAGCACCTATGCGATAAGCGGTTATTGCCATAAGCACTTGAGTAGCTGTTTACCAAACGCACCAAAACTTTT CTAGCGATTGTTAATCTTTGTTACCTCTGTAGCCCTGCCAACCCAACTTGGTATCTCTGATTTCACTGGTTACATGTCGT TTTTTAACAGGTGAGGAAAAGGTGGAGTCTGCCCGAGCACCTGCAGGGGAAGATGCATAGGTAGGTTATGTACCAACTTA GCATATGAATATTTGGGTTCTACATTTTACCCTGACAAAGTTACATTATGCAGTGATGGGAAAGCAGATATTTGTTAGGG GAATTTGTGGTGTGCATACAAGAACTCTTGCAACTCTTCATAGTTTACCATTAGGATGTGATGTTGTAATAGAACATGAA CTTGGTCTCTAGTAAATTACCATAGGGCTTTGTGATGTCATGTGAGTCTTTCATTCTATGCTTGTCTTTGCTACTATTGG AGACTGGAGTTGAGATTGCATTGGTTGGTGTTGTTTGGTTGTAATTTAGTGGATTGCTTCTGACTTGGATCTTTCCAAAA AGAATGCTAGCTTGCATTCAATTAGTTTACACAGTTGATATTGATTTAAACTTGCCTTGTTCAAAAAAGAAAAAAAAAAC CGAATCTTGGTTTGTGATTTCCATAAGACCATGCAGTAGTGTTTGTAGGGATGAGACTAGGAGATGGATGCGTGTACATG TAAAACAAATGTATCTGAAAGAATAATTTGGGGACTTAGATAAAGGTCCTCTTGGACTTGTAAGTTTAGTGGTTTACAAA TTAGTCTTGTGTGCGTACTCGGTACAACTTGAACAAACAATACTCCGGTAAACACTGATAAAACATGAGAATAAGACCAG ACAACTTGAAAGATCAATATTCCGGTGAGTATTAATTCAAAAGCAAGAACTAGCGATGAACAGTGAAGGTAGAATGCAAA CCTTATCAGTAAAGAAAATATGTTTACTTGACACTCTTTGAAGCGATTGTCGTAATTGGGACTTGGGCATTTTTAGAACT TTCAATAACTATATGTCAAACCTTGATTTCAAATTATAGTC
CDS sequence (LotjaGi4g1v0377600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCCACCAAGGAACGTGACAACTTCGTCTACATCGCCAAACTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGT GGAGGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAGAGAAACCTTCTGTCAGTTGGGTACAAGA ATGTGGTGGGTGCTCGCCGGGCTTCGTGGAGGATTCTCTCCTCAATTGAGCAGAAGGAAGAAGCTAAAGGGAATGATGTG AGTGTGAAGAGGATAAGGGAGTATAGGCAGAAGGTGGAGTCTGAGTTGTCCAATATATGCAGTGATATCATGATTGTTAT TGATGAGCACCTTATTCCATCGAGCTCTGCTGGTGAACCTAGTGTCTTTTTCTACAAAATGAAAGGAGACTACTATCGGT ACCTGGCGGAATTCAAGTCTGGTGATGATAGAAAAGAGGCTGCTGATCAATCCATGAAAGCATATCAGTTGGCTTCCACT ACAGCAGAGACTGAATTACCTCCCACTCATCCCATTCGATTGGGCTTGGCTTTGAACTTCTCTGTCTTCTACTATGAAAT TTTGAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAACTGGATACTCTGAGTG AGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACCTCTGACATCCCTGAA GAAGGAGGTGAGGAAAAGGTGGAGTCTGCCCGAGCACCTGCAGGGGAAGATGCATAG
Protein sequence (LotjaGi4g1v0377600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTKERDNFVYIAKLAEQAERYEEMVEAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDV SVKRIREYRQKVESELSNICSDIMIVIDEHLIPSSSAGEPSVFFYKMKGDYYRYLAEFKSGDDRKEAADQSMKAYQLAST TAETELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE EGGEEKVESARAPAGEDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 248 | 248 | 9.7E-124 | ||
| PIRSF | 1 | 247 | 247 | 1.8E-118 | ||
| PANTHER | 3 | 252 | 250 | 5.9E-152 | – | |
| PANTHER | 3 | 252 | 250 | 5.9E-152 | ||
| SUPERFAMILY | 6 | 237 | 232 | 2.88E-103 | ||
| SMART | 7 | 248 | 242 | 1.7E-173 | ||
| Coils | 13 | 46 | 34 | - | – | |
| Pfam | 14 | 235 | 222 | 7.7E-105 | ||
| PRINTS | 39 | 68 | 30 | 3.0E-84 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| PRINTS | 88 | 112 | 25 | 3.0E-84 | ||
| PRINTS | 119 | 141 | 23 | 3.0E-84 | ||
| PRINTS | 154 | 180 | 27 | 3.0E-84 | ||
| PRINTS | 181 | 207 | 27 | 3.0E-84 | ||
| PRINTS | 208 | 237 | 30 | 3.0E-84 | ||
| ProSitePatterns | 217 | 236 | 20 | - | ||
| MobiDBLite | 237 | 258 | 22 | - | – | |
| MobiDBLite | 239 | 258 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0377600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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