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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0377700 |
| Transcript ID | LotjaGi4g1v0377700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pollen Ole e 1 allergen/extensin; TAIR: AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein; Swiss-Prot: sp|O49813|OLEE1_BETPN Olee1-like protein; TrEMBL-Plants: tr|I3T385|I3T385_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0377700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75654040..75655978) extracted from Lotus japonicus Gifu genome v1.2.
CGGCATTATTTTTCCACAATAACAAAGACATTTTTCAATGGACATGAAAGAAGAGGTTATTAGGTAAGAGAGACTGAAAG AGGGAAAAACGGGGTCAAAACAACAATTTCAACCACCAGAAAAACAAGGGAGAAATGAGAACCTCTAGATTAAGGGACAG TGCTAAAATAAGGTGAAACATTTTTGGGTATAAAATGGAGCCTCTTTGTCACTTGAACGTAATCCCCTCCTCTGAAACCA AATAATCTCCATAAAAGAAAAAAAAACAAGAATAAGAAACAGGATTCACAATGGCCAAGTACACCATCATCGCTGCCTCT GCCCTCTGCTTCTTGACCTTGGTCGGTTCTGCTTACTCCCAGGACCGCTTCTTCATTGAGGGCACAGTTTACTGTGACAC TTGCCGCACCCAGTTCCTCACCAGGGTTAGCGAGTTCATGTCAGGTAAACACATGATTGATTTTAGATTATAATATTAAT CGTAACATGAAACGATAATGTATTCTAACTTTCAATATAAGTTCGAACTTCATTTGAAAACAAATAGATCCTTAATCAAT TATTCATGAATAATTTTATATTATATTTTTAACATATGTATTAACGCAAGGAGCTGTTTAGGCGTGAAACGTGAACAATG TAGAGACTCGCCTCGAACTATATACTATTTGGTCATTGAGTTTTTTGTGACACATATCATGAACCAATTAGTTTGAATCC TCTCGTACAAGATCCTCTTCAGCATCCATCCTGCAAGTTTTTAACCATTGATTTTTAAATCAATTTCTAATTAGGTTAAT CAAACAACTTATTTATTAAAATATGTAAAAGTAATTTCAGTAACGTCAAAAAAAAAAAAATCAGTGCTAGACTGAAGGAG AGGCTGAACAGGATACAAATTCACTATCTTGATAAAAAAAACATAACTCAACTGTCTTAAAAGTTTGCTAATACTTTGTA AGCGACATGTGGTCTTAGAAATATGCCTTAGCCCGAGGATAATCAGAACCGAACAATTTTCGTTCATCTCAAAAGTCATA ACCTGCATTTTGTAATATCTATACTTACTATAAGAAACTATTAATGTGGCTATTACCATGGTGAAGGTGCAACCGTGGGT GTGGTGTGCAGAGAACGTGATGCTGGTGCCAAGGTGACATTCAGCAAAGAGGCAGTGACCGACGCTAACGGAATGTACAG CGTTGCGGTGGACGGAGACCACGAAGATGAGGTTTGCGAGGTGAAGCTTCTCAAGAGCAGCAGGGCTGACTGTTCAGAGG TTGACACTGAGTCACACCTTGAACAGGCTTCCAGGATCAGCATCACCAACAACAATGGCATCGTTTCCCCTGTCCGCACT GCCAACCCACTTGGTTTCTTGAAGACAGAGCGTCTTCCTGAGTGCGGTCACATCCTCCTTCAGCTTGGTCTTCATGAGGA TGGCTCACTCAAACATTAAATTATTAATTGATGAATATAAAAGGGGAGGGGGATCTAACCTCTTTGTATGATCATGATAT GATGTAATATTGTGAGAATTATATATATATAAGCTTGGCCTTGAATTCTCTGAAAAAAAATGGGATCTTTATCTATAACT CACTTGATAGATCATATATTGATCTCTAGGCACTTTTCTTTTTTACAGTTAAAATATGCTTCATTTAAATTAAAAGAGGA TACATCCAATCTCATAAGAGAATGCAAATCATGAGGAAAATCCTCTACCAAAACATGAGACCGAGAAACAAACACATTTT TAACTAGGAAAGCAGCGCCACCATTGCAATGCCTCATGAACAAGCTCACACAGGAGATGAAAGAGTAAGGGATCGATTCT AATTTTTGAATACGGTTTTAATTTCTCTCGCATATATGAAAGGAAAGTGAATGAAAAGAGAATAGAAAATAAGATGATAT TAAGATTATTTTGTTGCAG
CDS sequence (LotjaGi4g1v0377700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGTACACCATCATCGCTGCCTCTGCCCTCTGCTTCTTGACCTTGGTCGGTTCTGCTTACTCCCAGGACCGCTT CTTCATTGAGGGCACAGTTTACTGTGACACTTGCCGCACCCAGTTCCTCACCAGGGTTAGCGAGTTCATGTCAGGTGCAA CCGTGGGTGTGGTGTGCAGAGAACGTGATGCTGGTGCCAAGGTGACATTCAGCAAAGAGGCAGTGACCGACGCTAACGGA ATGTACAGCGTTGCGGTGGACGGAGACCACGAAGATGAGGTTTGCGAGGTGAAGCTTCTCAAGAGCAGCAGGGCTGACTG TTCAGAGGTTGACACTGAGTCACACCTTGAACAGGCTTCCAGGATCAGCATCACCAACAACAATGGCATCGTTTCCCCTG TCCGCACTGCCAACCCACTTGGTTTCTTGAAGACAGAGCGTCTTCCTGAGTGCGGTCACATCCTCCTTCAGCTTGGTCTT CATGAGGATGGCTCACTCAAACATTAA
Protein sequence (LotjaGi4g1v0377700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKYTIIAASALCFLTLVGSAYSQDRFFIEGTVYCDTCRTQFLTRVSEFMSGATVGVVCRERDAGAKVTFSKEAVTDANG MYSVAVDGDHEDEVCEVKLLKSSRADCSEVDTESHLEQASRISITNNNGIVSPVRTANPLGFLKTERLPECGHILLQLGL HEDGSLKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 163 | 163 | 1.9E-55 | ||
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 163 | 163 | 1.9E-55 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 168 | 145 | - | – | |
| Pfam | 29 | 114 | 86 | 1.0E-18 | – | |
| ProSitePatterns | 30 | 39 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi4g1v0377700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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