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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0378700 |
| Transcript ID | LotjaGi4g1v0378700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT2G34190.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q94C70|NAT2_ARATH Nucleobase-ascorbate transporter 2; TrEMBL-Plants: tr|A0A0B2SSV2|A0A0B2SSV2_GLYSO Nucleobase-ascorbate transporter 2; Found in the gene: LotjaGi4g1v0378700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75792263..75796702) extracted from Lotus japonicus Gifu genome v1.2.
ACACAAACATTGAGAGAAGAACTAGTAACAAAGTTGAACTAAGAAAACAGAGAAAAAACAGAGAGAGCTCACATCAATCT TCTAATCTTCATTCTGTCTCTGAACATTATTGTACTTGTTGTGACTTGTTAGCTTTTTTGTTTCTGCTTTTGAACATATC ATACATTGAATCAATCTTAGTTTCTTCACTTTCACTTTCTTCTACCTGGGTGGATCATAGTTTCAACCTTTTTTTTCCTC TGGAGCTGTTTCTGTTTCTAGTGATTCTTCATAAGCAGTAGGAATTGGAAGCAAATATTAGAAGTTGCAAATTGGGCAGT GAGTGATCATGGCAGCTATAAAGCCAGAGGAGATAAGCCACCCACCAATGGAACAACTTCAGGGCTTAGAGTACTGTATA GATTCAAACCCATCTTTGGGTATGCATGCTCAGCTTCAAGCTTTTCCCAGTTTCATTCTTAGTTTTCAGTTTTTCACATA TCTGATTTTTGTGTTTTTGAACTGTTAACAGTGGAGACAATACTTCTGGGTTTTCAGCATTACATTTTGGCCTTAGGAAC TGCAGTGATGATTCCTTCATTTCTTGTGCCTTTGATGGGTGGAAGTGATGTAAGTTATTGCTGATCCCAACTTCAAGTCC TTTTTCTGATTGATACTGATAAAATTCTGATATGGTATAGGAAAATCTCTATTAAGAAAAAATTCTATTTTGTTTTGTTT TTGTGTATTCAATTTTGTCATATGCTAAAGTGAATTGGGTGTCCCACTGAAAAGGAAATGTGGGGACCTTAATTGAGATG GCCAAGATATAGAGAATTGACTTTCATACATTGGCTTATTGGTTCAGGGTGATAAAGTGAGGGTGGTACAAACTCTGCTT TTTGTTGGAGGAATTAATACACTTTTGCAGACACTATTTGGAACTAGGTTACCAACTGTATTAGGAGGATCATATGCCTT CATGGTCCCCATTGTATCGATAATCCGCGATCCATCTTTCGCAATGATAGAGGACCCACATTTGGTTAGTACACTCCTGT AATCACTCTTTCATATTTTGTCCTGAATTTAATTCCATGTTAGATATGGAGTTATGGACTATCTAAGCATGTGAATAATT ATCCCTTTATGGCTTAAACTAATGCCTCTTCTGTTTATCTCCAGAGATTTCTCAGCACTATGAGAGCAGTCCAAGGTGCA CTAATAGTAGCATCAAGCATACAGATTATTTTGGGATTTAGTCAACTATGGTCAATTTGCTCTAGGTAAGCTCTAACACC ATGATTGATGATACTTTTAGTCAACTGTGGCCAATCCGACATTCTGTGTAGTCTATTAAGTAATTGATGTCCTTTTCATT TACATGCAGGTTTTTCAGCCCACTTGGAATGGTTCCAGTAATTGCATTAGTTGGTTTTGGATTATTTGACAGAGGGTTCC TTGTGGTATAGCACTAAACCACATGTCTCTATTACCAGTTGTTTTAGAATATCAAGAAGATGAAATTTTGAAGTATTTGT TATTGGCTCATATTGTTTAACAAAACTGGTTTGTGTTTTTCTCAGGTTGGGACTTGTGTTGAAATCGGAATTCCCATGCT AATCCTGTTTATAGCCTTCTCTCAGGTGCAAATAAAATTTACTGTTGTTAAGTAAAATAGGTGAATTAGAAATTCTTGTT TAAATTAGCTTGTGAACAACATAATTAAAAATACATAATAAGATCAACATTAGGTTCTCATGTTAAGTACAAAGTACAAT AGGTGAATTAGAAAGTTCTTGTTTAAATGAGCTTGTGAAATACATAATAAGATCATCTTAGGTTCTTATACTAGCTCTGA TATTTGATAATTCCTTTTTTCTGATCCCATTATGTTGAATCCAACACATTGCTTAAAGAGAAAAATCCTAAGCATAGTGA TTGTAAAGTTTTAAGTGAGGGCCAAACAAAAAGGGATTTTACAAATATGTAGTGTAGGTTGTAGACTTGTAGTTTAACAA TGTGTTTGGATTCACAGTCAACTTTCAGAATCATTTCTCCTAAGACAAAATTCACTCCTAGCAGCTTCTCTCAAAATTGC TACAAATTTCCAAACACACTAAATACATTTATCCTTTGGTTCTCTTGTCTTTCTTTTTGATTTGTTAAACCCATAAGGAA TGTAAAGTACACTAAGCAAGTCCTAACTTGATATGTTGTTGTATGCAGTATTTAAAAAATCTTCAGACAAGACAAGTACC AATACTAGAGCGATTTGCTCTACTCATATCAGCCACAGTGATATGGGCATATGCACATCTCCTAACAGCAAGTGGAGCTT ACAGAGACCGCCCAGAATTAACGCAACGTAGTTGCAGGACAGACAGGGCTAATCTCATTTCTTCTGCTCCATGGTTGGTA CCAAAAGTATTTTTCTAGTTGAATGTTTGCAACATGATGCATGTATAAAGATGTAAGATAAAGATTCCATACTTCCTCAA TGTTTGTATCCAATAATTGACTCATGAGTATGTTGTTGTAGGATAAAGATCCCATACCCTCTTGAGTGGGGTGCTCCTAC ATTTGATGCTGGCCATGCTTTTGGAATGATGGCTGCTGTCTTGGTCTCATTAATTGAGGTATTGCACACATACATAAAGA TGATATTCATAACTCAAAATTATCTTGAATCAGAGTATTTGATTTTTTGTTATCCTTCGCCGTAATAATATCTTGGGGTT CTCTTAGGAATTAATGAGACCTTTCACTTGAGAGGAATCTACAAATGAATCAATCCACTAATATTATCAATTTGTTGACT AGTGATAAAACAAGTTCCTTGTTTTTGACAGTCAACTGGTGCATACAAGGCTGCATCGCGATTAGCAAGTGCCACACCAC CTCCTGCTCATATCCTGAGCCGCGGTATCGGTTGGCAGGGAATTGGAATCTTGCTGAATGGCCTTTTTGGAACACTGACT GGTTCAACAGTTTCTGTGTAAGTACTATTCTTCTTTTTGTTCATATTTTTTACTTTGTATGGACACAAATTGATTCTTTT AGGACCATCACAGAGAGAATGTGGGGCTTCTAGGAAGCAACCGTGTTGGCAGCCGAAGGGTCATTCAAGTTTCAGCTGGG TTTATGATATTCTTCTCAATGTTAGGTGAGTAGCAAGTGCTGGCTTTGCATTGTAATTAATATATGTGTAAACTAATTCC AATTTCATAGTTTTTACTTAAAATCCTTAATTTGCTATTTGTTTTTCAGGAAAATTTGGAGCTTTATTTGCATCAATACC ATTCCCCATTTTTGCTGCTGTATACTGTGTTTTGTTTGGTATTGTCGGTGAGTACCACTAAATCATTGATTTTGCTTGAA CATTCTTTTTGCTTCCTGTCTCTCTTATGACAATTACTATTTTTGTTTTTTCAGGTTCTGTGGGGCTATCATTTATGCAA TTCACAAACATGAATTCAATGAGGAACCTCTTTATTATTGGTGTTTCCCTCTTCTTAGGGTTGTCTGTTCCGGAGTATTT CAGAGAATACACCATCAGGGCACTTCATGGTCCTGCCCATACAAAGGCTGGATGGGTGAGTTTGTTGTTTTATCCACCTA TACTAATTTGGATTGTCTGCACGGCTCATATCTTAAGCTAATCTCTACTGAGTAATCTTGATAAAATATATGAACTGACT CTTTGATCAAACTGTGCAGATTTCTTGACCACAGGGAACCTAAATCCTAAATCCTATACCTATATAATATACAATATAAT TTATCATTGAAGAAATTATAATGAAATTGTTTTTTCCCCTTTGGTTTTTGCAGTTCAATGATTTCCTTAACACTATCTTC TACTCTCCCCCAACTGTTGCATTGATTGTTGCTGTGTTCTTGGACAACACTCTTGACTACAAGGATAGTGCCAAGGATAG GGGAATGCCATGGTGGGCTAAGTTTAGAGCATTTAAAGCCGATAGCCGGAATGAAGAGTTCTACTCACTCCCTTTCAACC TCAACCGGTTCTTCCCTCCATCCTAAGAAAATTCTAATATCATATACAAGAGGTGTTAGAGGAAAAGCATCATTTCCAGA TAAGGATCATTCTATATGATGATCAGTTTGAAGAGTTAGAAAAATGTTGTACTCTTAGGTAGAAGGTTCCCTTGTGCTTT CTGTTCATTTGTTTTTCATATATTTTTATAGTTTGAATTGGTTTCTTTAGTTATTTTCATACAATAGAACAAAAAAGTTA TCTGTTCCTTAACTTACATATTTCTTAATTCATTTACTAAAATCATTAAGTGGTTGGATTTAGTTTAAATTGTAATTATA TTTGAGCCTATCTTTATTCATTTTATTTGGCCAATGAAATTCAATGTCCACATGTGCAAAATTGGTTCAGGGTGAGAGGA GCAGCTATTTTTGTTTGCACATTCACTCTGTGCACCTTGC
CDS sequence (LotjaGi4g1v0378700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCTATAAAGCCAGAGGAGATAAGCCACCCACCAATGGAACAACTTCAGGGCTTAGAGTACTGTATAGATTCAAA CCCATCTTTGGTGGAGACAATACTTCTGGGTTTTCAGCATTACATTTTGGCCTTAGGAACTGCAGTGATGATTCCTTCAT TTCTTGTGCCTTTGATGGGTGGAAGTGATGGTGATAAAGTGAGGGTGGTACAAACTCTGCTTTTTGTTGGAGGAATTAAT ACACTTTTGCAGACACTATTTGGAACTAGGTTACCAACTGTATTAGGAGGATCATATGCCTTCATGGTCCCCATTGTATC GATAATCCGCGATCCATCTTTCGCAATGATAGAGGACCCACATTTGAGATTTCTCAGCACTATGAGAGCAGTCCAAGGTG CACTAATAGTAGCATCAAGCATACAGATTATTTTGGGATTTAGTCAACTATGGTCAATTTGCTCTAGGTTTTTCAGCCCA CTTGGAATGGTTCCAGTAATTGCATTAGTTGGTTTTGGATTATTTGACAGAGGGTTCCTTGTGGTTGGGACTTGTGTTGA AATCGGAATTCCCATGCTAATCCTGTTTATAGCCTTCTCTCAGTATTTAAAAAATCTTCAGACAAGACAAGTACCAATAC TAGAGCGATTTGCTCTACTCATATCAGCCACAGTGATATGGGCATATGCACATCTCCTAACAGCAAGTGGAGCTTACAGA GACCGCCCAGAATTAACGCAACGTAGTTGCAGGACAGACAGGGCTAATCTCATTTCTTCTGCTCCATGGATAAAGATCCC ATACCCTCTTGAGTGGGGTGCTCCTACATTTGATGCTGGCCATGCTTTTGGAATGATGGCTGCTGTCTTGGTCTCATTAA TTGAGTCAACTGGTGCATACAAGGCTGCATCGCGATTAGCAAGTGCCACACCACCTCCTGCTCATATCCTGAGCCGCGGT ATCGGTTGGCAGGGAATTGGAATCTTGCTGAATGGCCTTTTTGGAACACTGACTGGTTCAACAGTTTCTGTAGAGAATGT GGGGCTTCTAGGAAGCAACCGTGTTGGCAGCCGAAGGGTCATTCAAGTTTCAGCTGGGTTTATGATATTCTTCTCAATGT TAGGAAAATTTGGAGCTTTATTTGCATCAATACCATTCCCCATTTTTGCTGCTGTATACTGTGTTTTGTTTGGTATTGTC GGTTCTGTGGGGCTATCATTTATGCAATTCACAAACATGAATTCAATGAGGAACCTCTTTATTATTGGTGTTTCCCTCTT CTTAGGGTTGTCTGTTCCGGAGTATTTCAGAGAATACACCATCAGGGCACTTCATGGTCCTGCCCATACAAAGGCTGGAT GGTTCAATGATTTCCTTAACACTATCTTCTACTCTCCCCCAACTGTTGCATTGATTGTTGCTGTGTTCTTGGACAACACT CTTGACTACAAGGATAGTGCCAAGGATAGGGGAATGCCATGGTGGGCTAAGTTTAGAGCATTTAAAGCCGATAGCCGGAA TGAAGAGTTCTACTCACTCCCTTTCAACCTCAACCGGTTCTTCCCTCCATCCTAA
Protein sequence (LotjaGi4g1v0378700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAIKPEEISHPPMEQLQGLEYCIDSNPSLVETILLGFQHYILALGTAVMIPSFLVPLMGGSDGDKVRVVQTLLFVGGIN TLLQTLFGTRLPTVLGGSYAFMVPIVSIIRDPSFAMIEDPHLRFLSTMRAVQGALIVASSIQIILGFSQLWSICSRFFSP LGMVPVIALVGFGLFDRGFLVVGTCVEIGIPMLILFIAFSQYLKNLQTRQVPILERFALLISATVIWAYAHLLTASGAYR DRPELTQRSCRTDRANLISSAPWIKIPYPLEWGAPTFDAGHAFGMMAAVLVSLIESTGAYKAASRLASATPPPAHILSRG IGWQGIGILLNGLFGTLTGSTVSVENVGLLGSNRVGSRRVIQVSAGFMIFFSMLGKFGALFASIPFPIFAAVYCVLFGIV GSVGLSFMQFTNMNSMRNLFIIGVSLFLGLSVPEYFREYTIRALHGPAHTKAGWFNDFLNTIFYSPPTVALIVAVFLDNT LDYKDSAKDRGMPWWAKFRAFKADSRNEEFYSLPFNLNRFFPPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 524 | 524 | 0.0 | – | |
| PANTHER | 1 | 524 | 524 | 0.0 | – | |
| Phobius | 1 | 37 | 37 | - | – | |
| Pfam | 32 | 436 | 405 | 3.0E-63 | ||
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 38 | 57 | 20 | - | – | |
| Phobius | 58 | 68 | 11 | - | – | |
| Phobius | 69 | 87 | 19 | - | – | |
| TMHMM | 87 | 109 | 23 | - | – | |
| Phobius | 88 | 92 | 5 | - | – | |
| Phobius | 93 | 109 | 17 | - | – | |
| Phobius | 110 | 129 | 20 | - | – | |
| Phobius | 130 | 151 | 22 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 152 | 156 | 5 | - | – | |
| TMHMM | 157 | 175 | 19 | - | – | |
| Phobius | 157 | 175 | 19 | - | – | |
| Phobius | 176 | 179 | 4 | - | – | |
| Phobius | 180 | 199 | 20 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 200 | 218 | 19 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 219 | 239 | 21 | - | – | |
| Phobius | 240 | 359 | 120 | - | – | |
| Phobius | 360 | 382 | 23 | - | – | |
| TMHMM | 360 | 382 | 23 | - | – | |
| Phobius | 383 | 387 | 5 | - | – | |
| TMHMM | 386 | 407 | 22 | - | – | |
| Phobius | 388 | 407 | 20 | - | – | |
| Phobius | 408 | 418 | 11 | - | – | |
| TMHMM | 419 | 436 | 18 | - | – | |
| Phobius | 419 | 436 | 18 | - | – | |
| Phobius | 437 | 461 | 25 | - | – | |
| TMHMM | 458 | 477 | 20 | - | – | |
| Phobius | 462 | 481 | 20 | - | – | |
| Phobius | 482 | 524 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0378700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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