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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0384500 |
| Transcript ID | LotjaGi4g1v0384500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT4G13450.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8KA63|MURB_BUCAP UDP-N-acetylenolpyruvoylglucosamine reductase; TrEMBL-Plants: tr|I1KSL4|I1KSL4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76292115..76294799) extracted from Lotus japonicus Gifu genome v1.2.
CGAGTCTTGAGGAAGATGTCCCATTTTTGCAATCTAAACATAGGAGAAGAAAACAGAGGAGAACCCAATTGTGATATGTG AATCACAAAACAAAAACATAACAATTTAGTATTAGCTGTTAATTATGATAATTAGTGTGTCATGAGCAAACAAAAATATA ATGAACGTCTCATATAATCATCATCATTATTATAACATCTTCCTTCTCTCCATTTTCCTCCTTTAGCCCTGTTTCTGATC ACAAGAACCAGGGTGGGTGGTGGCTGAGCTAGACAAACATGGTGGTGGGTCACGGTGGCGGCGCTGGCATGGCCAGCAAC AACCGGAACCCCACACAAGCTCGTAAGGTCATGGTGGTGGCTGATCCGACGAGGGAATCCGCAGGGGCGTTGCAATATGC GCTTCGCCATGCAGTGATTGAACAAGACGAGTTAATTCTGCTGCATGTTGAGAATCCTACGTCGTGGCGCAACACGATAT CGACGTTCCTTAAGATGCCTTCATTGGGAAGCACCACCACCGCATCGATTGATATGGGAGGAGGAGGTGCGGCGGCGGAC GGTGAAGGGGTGGATTTTCTGGAGGAGATGAAGCATGCATGCAGGGCTTCGCAGCCGGCGATGAAAGTGAGGGTGGTGAG GGTGGAGATGGATGGGAAAGACAGGGCGAACACGATTCTTACACATTGCATGAATCAAGGGGTGGATGTCGTAGTTATAG GGCAGAAGCGCACTATTTCTTCAGCAATATTAGGGTAATGAATCATTCTTCTACTTCCTCTTATAACTTTCACAAACTTC GAGAAACTTCAGCTTCTATCAATTAATTTTGAATTTTGAATTAATTGTAGGAGAATTTCTATATATGCATTGTTATAGGG TATGGTAAGCTAACCATTTCAAAAGCTCAATAAATCATGTGGAGATGGTTTGTGTACCATATATCTCTAACACACTTTCT ATATCCAAAAGTCATTTGAAAGAGAATAGAGCACATGATCTCATTTTGTGTAAATTTTAACTTTCGAGATAGGGATGTAA CTCTAAACTAGCTAGTGATCATAAGGTTTAGGATATTATTGTTATCTATTAGAAGAAACTCTCTGATAGCTCTCTAACTT AGAGGGTTGTGTTCTTGTTCTTCTTAATTACTAAATGGGAATTTCAAATGGTAACCCATCGTGTCCTCTATGACGTAGGG GGTTGTGTTATCATATCATTGTTAATAACTAAAATGTTAATCTCAAAATTCATTGTTATCTGTTATAACATATCATTTTT ATTACACTAAGCAATCACTTATTAGTTAATTATATAAGACGAAAGCAATGAAGATGGCGATATGGAAAAGTTTTTCACCA TTAAAATGTCAATTTCAAATCTCATTATGATCTATTATGATTTGATATTTGTTACACTAAGTAATCCCTTATTGATCAAT GAGAGAGTGCACCCATCATGAGGATTGAGGAGGGCATAAGCTTTTCATATTTGAATAAACATGCATAATTTTATGTTAAT AAGTGATTATGTTTTTGTATTTCTTTCTACTACACTCCTTTACATATAGATTTTCAGATCTTATTTGTATATGTAAGAAA ATTCTAAAATTCAAATATGTGACCGCAAAGTCATATGGCAGCAGCCTTACCATTGCATTTTACTTTGGTTCATGAATTTA TGTAATCATAGTGTTTCATGTAATAACTGGTGCTGATGAAGTTAACATCTTACTAATGGTTTTTCCACATTTTTCTATGC ATGGCAACAGGTATAATAAGCGACCTGCAGCAGGAGGATCTTTGAGAGGGGCAAGAATGTTAGACACAGCAGAGTATTTG ATCCAAAACAGCCCCTGCATCTGTGTTGCTGTACAGAGAAAAGGCCAAAATGGAGGCTTTGTTCTCAACACAAAAACCCA TAGAAATTTCTGGCTCTTAGCCTAAAGGGTAAACTAATGAAGACTTCACATGTATAGAGATGGATCCCTCTGCCACTCTT TAAAGCACACATCATTTCCTTAATTTATGAGATTGTTTATGGTTTGCCATCATGTTCTGTAAGACTGCAGAGATCATGGA TCTAAAGTGAAATTTTTAAATAGGCACAATCAATCACTATTATTTTTTAGGCACTCAAATTATTATGACATATGTAACCA AAAGTATTTTGAAAAATAGATGTATATTTTTTACCACAATTCCTAAATGTTTATACATGTCAAATAATGATTTGAGTGCT TATAATAATGCCTATCTGAAAATTATTTTAGATCTAGTGATGACATTTGCCCATGTGGTCCACTTTGTTTTGCAAATATT GGAGGAGAAACCATGGATGTTATATCATGTGCTTAGATTGCACCATACTTGTACATTGAAAAAATGAAAAGTGACAATTT TTTTGAGAAAGTGAACAAAACGACAGTCCTACTGTGTCAAAAGGAGAAAAGTTTCGATCCAGCTCAATTGGCCCCAGATC AAATTTCTATAATGCATGTGGACATGTTTTGTTCAAATATTGCCCCCAAAACTCTACCAGATTCTTTGCCTAAAATCTTC TGGTTGTGGTAGTAAAGGCACAAGGTCTCACTTTTTTGGTTATTAAGCAAACCAGTAAACTGAACTCTCCATTATTTGTC TATGTTTGGACAGAATAGATGTTTGGAAGAGAATGAAATAAAAAT
CDS sequence (LotjaGi4g1v0384500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTGGGTCACGGTGGCGGCGCTGGCATGGCCAGCAACAACCGGAACCCCACACAAGCTCGTAAGGTCATGGTGGT GGCTGATCCGACGAGGGAATCCGCAGGGGCGTTGCAATATGCGCTTCGCCATGCAGTGATTGAACAAGACGAGTTAATTC TGCTGCATGTTGAGAATCCTACGTCGTGGCGCAACACGATATCGACGTTCCTTAAGATGCCTTCATTGGGAAGCACCACC ACCGCATCGATTGATATGGGAGGAGGAGGTGCGGCGGCGGACGGTGAAGGGGTGGATTTTCTGGAGGAGATGAAGCATGC ATGCAGGGCTTCGCAGCCGGCGATGAAAGTGAGGGTGGTGAGGGTGGAGATGGATGGGAAAGACAGGGCGAACACGATTC TTACACATTGCATGAATCAAGGGGTGGATGTCGTAGTTATAGGGCAGAAGCGCACTATTTCTTCAGCAATATTAGGGTAT AATAAGCGACCTGCAGCAGGAGGATCTTTGAGAGGGGCAAGAATGTTAGACACAGCAGAGTATTTGATCCAAAACAGCCC CTGCATCTGTGTTGCTGTACAGAGAAAAGGCCAAAATGGAGGCTTTGTTCTCAACACAAAAACCCATAGAAATTTCTGGC TCTTAGCCTAA
Protein sequence (LotjaGi4g1v0384500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVGHGGGAGMASNNRNPTQARKVMVVADPTRESAGALQYALRHAVIEQDELILLHVENPTSWRNTISTFLKMPSLGSTT TASIDMGGGGAAADGEGVDFLEEMKHACRASQPAMKVRVVRVEMDGKDRANTILTHCMNQGVDVVVIGQKRTISSAILGY NKRPAAGGSLRGARMLDTAEYLIQNSPCICVAVQRKGQNGGFVLNTKTHRNFWLLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 216 | 202 | 6.1E-90 | – | |
| Gene3D | 19 | 196 | 178 | 4.4E-14 | ||
| SUPERFAMILY | 22 | 151 | 130 | 1.17E-10 | – | |
| Pfam | 22 | 193 | 172 | 3.5E-13 | ||
| CDD | 23 | 193 | 171 | 1.65415E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0384500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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