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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0387700 |
| Transcript ID | LotjaGi4g1v0387700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Magnesium transporter MRS2-like protein; TAIR: AT3G58970.1 magnesium transporter 6; Swiss-Prot: sp|Q93ZD7|MRS24_ARATH Magnesium transporter MRS2-4; TrEMBL-Plants: tr|I1K496|I1K496_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0387700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76620380..76624219) extracted from Lotus japonicus Gifu genome v1.2.
AAAGTGTTACCTTTTTCTCCATAAACAAAGAGTGAGTGAAGGGTTGAGAGGCAGAGGAATCTTTATGGAAGATGCAACCG GAGAAGAAGACGAAGAAGAACACCACCACCACCACCACCACCACCACCACCTTTCAATTGAGAATTCTCACTCTCCTTGA ATATCCAATTATTCATAATTATTAATTATGGGTAAAGGACCATTCTCCTTTCGCCGCTCATCCTCCCGCCGCCGCTCTAA GAAGGCCACGCTGCCGCCACAATCGCCGCCGCTCCATGCGACCGAAATTTCCGGCTCGCCGGTCGATAACCGCTTGGTCC TCGGCGGCGGTAGCAGCGGTACGGTAACGAAGGCGAAGAAGAAAACCGGCGGTGCCAGGCTGTGGATGCGGTTGGACCGG GCGGGGAAGTCGGAGCTCGTGGAGTGGGATAAGAACGCGATCATCCGCCATGCGTCGATTCCCGCCAGAGACTTGAGGAT TTTGGGCCCTGTCTTCTCTCATTCCTCCAATATCCTCGGTAAATTGATTTTCAATTCAATTCAAATCGGTTTTTAGGGTT TCTCTGAATGTTTGATCGTAGTGTTCGTGAATTTGGAATTTGGATTTTGATGGAGCCTGTGATCTTTTATGATTATTTCT GATCAATTAGGTTAGAGAGTTTCTGAAGAATGATTAAGGTGTAGAATTTGAAATTGAAGGTTTAATTAGAATATTTATGG TTATTTAAACTGGGATTTTGATGAAGAATGATATTGGATATGCTTTTCATTGTATTTGCAGCGAGGGAGAAAGCGATGGT GGTTAATTTGGAGTTTATAAAGGCTATTGTAACTGCTGAAGAAGTGCTTTTGCTTGATCCTCTTCGCCAGGAGGTTCTTC CGTTTGTTGAGCAGCTCAGGCAACAGCTTCCGCATAAAAATCAGCCTAAACAGCTTCTAGGGCCTGCAGATGAACAGGAG AGTGAAATGCAGGTTTCTACTGGCAGACAATGGTTACCTGTGCCGGAGGCTGCGGAAGGTTTGCAGTCAGAGCTTCCGTT TGAGTTTCAAGTTCTGGAGATTGCTTTGGAAGTTGTCTGCACGTATCTGGACTCGAATGTGGCAGACCTTGAGAGAGGTG CTTACCCTGTTTTAGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTCGAACATGTGCGGAGTTTGAAGAGCAATCTT ACTCGTTTGCTCGCACGTGTGCAAAAGGTATGCTGCATAAGATTTGTATTGTCAAAGGTTGCCTTGATTCACTGAGAATT ATTCTTTTGTTGACTAGGGTTGTGGAAGCTGAGAATTGGTGGATTAACCTATAGGAAAATTTTAATGTTCTTAATCTATC GATGGGATTAAAATATTGCACAAGACTGAATTCTTGTATGCAATGTATGTAGTTTGTCTGACTTGGACTGGTCAAGAAAC ATGTAAATAGAACCCATGAGAGGGGCTTCTTTTAATTGAAGTGACAAAGGAATTATTAGTTATTATACGTTGATATGGTT TAATTTTTTTTAAAGAAGCAGTATTAACATATGATTCTTAGTCCTTGTGAGTTGCGGGCCTGTGGCACATATAATATAGA GAATCATGCAGTTGTTGAACAGAGCAAGAAAAGCAATTTCCCTCGTTAACCTTATGTTGTTGACTCCTCCATAGTCCTCA AATAGGAAATTCTATAGTAGGTTTTTGTTTGGCGTTTTATAAAGACAGATAACCGTAGCTTATGTTACCACACATCTAGT GATGCATACTGTCATCTTTGAGATATCTTACTTAGGAAATGTATGGTCCACTCTTACAGGTGAGAGATGAAATTGAACAT CTATTAGATGACAATGAGGACATGGCACAACTATATTTGACTAGGAAGTGGTTGCAGAATCAACAATTTGAGGCTAATTT GGGAGCAACAACCTCATATAACCTTCCAAATAATGCACATGTTCGCCGAGTTGGTTCTACCAAAAGTGGAAGCCTTGTGA CCAGCAACTATGAGGATGATAACGATGTGGAGGACTTGGAGATGTTGCTTGAAGCGTATTTTATGCAGTTGGATGGAACT CGTAACAAGATATTGTCGGTAAGTGTTCTTATGATCAGATTGTGGTCAAATCATGTCTGTGTCAAACTTTGAAGGTTGAT ACTGTCACTTTTTTTAATTTATCGTCCTATCTAAACTATATTATGATTTTTTTCTTTTAGACAATGAAATTCACAACTTA TATTTCGCTCCATATGTACCTGTCAACACAAAGTTGTGACTTGTGAGTCTTACTATAGTATAGGGCAGTACAGCGTCCTT TTACTTTTTTATTCCCACACAAACATCACTGGGTTGTTGCTAGTTTCAATGTGACACTGCTGGGAGCTTTCCCTCAGGAA TTATAAGCTTCTACAACTTATTCTAATCTCACCCTCTGCTGGGGCCATCAAATTTTGTTACTGTAATTTTAGAGAGGGGG TACTGGTAGTTTGTCCAACTTTGTTTTAGTTCAGGATTTCAGAAACACAGTATTGTCTGACTAGTTGGAAAACCAGTGCT TTTTATACTGTTGATTTCCTTTTATGGTTCACTGTGAAACTAGTAGAAAGGCTACTACTGTACTTTTTCCCAAGATTTTA TTTTTTTTGGGGCTGGGGAGCTACTGTGTTTTATGGAATATTGGGATTTGGCAAAGCATTCTCGATCATGAATTGTCTGC TGAATTTGATTAATGTTTATATGGTGAGAATTTGATTGGGATCTTGGAAGTTCTGAAGAACGATAGATGTTCTTCAGTCT ATCGTTCTTCAGAACTGGCAAAAGTTCTTACTTATTTTGGCTTCTGATTTGCAGGTTAGAGAATACATCGATGACACCGA AGACTATGTCAACATCCAACTTGATAACCATAGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCCTTTG CTATTGCTGTTGAAACTTTGATAGCCGGTGCATTTGGTATGAATATTCCTTGCCATTTATATAACACTCAAGGAATATTC TGGCCTTTTGTGGGGATCATTTCTGCAGCTTGCGTATTGCTTTTCCTGCTTGTCTTAGCATATGCTAAATGGAAAAAGTT GCTGGGATCGTAAGTATTGCCTGGTCATCAGTGATCCGAAGAACAGATCCGAACAAGTCCCTGAAAAGAAGGGACTTTGA AGGTTGTATCTCAATTTCTCACAATTTATTAAGCTGATGTCTAGGATGTTGAATATTGCTTTTGACATGGTGTACTTTAT AGCTGACACTATTCACACAGGCATTTTTCATTAAGCAGATGTATGTAGTGTCAAATAAATCTTCACACACACATAATTAT AGGCTTGATCAGCTTATATGTGCATGGCAATTGCATAAGGAACATTTTGGTGGGTATAATTTGTGAGCAGCCAACCACAT CACAAGAAAGTTCACTTTGAACACAAGCAATTTTAGAGAGATATATATAGAGTATAAGATGTGAGAAGACTTTGGTAGGT TTGGTTTTCATTTTCATTTTTTATTTTTCAGTTTTAATAATAAAAATGTCATCTTACTTTCATTTAGTTTTAAAACAGGC GAAGCCTCTGTTTATTTTGTAGTTGGATAAAATTAAGTGATAAAATTAAATTTGTTTGAATAAAGTTTGAAATAATGAAT TTTTTTTTTGGTGCTTAAATAAAGATGAAATAATGAAATAATGAATTTGTGTTTGCTTTTGGTTGATTAAGATATGTTAG AAGCAGTTTTTACGGTAAAAAAATTAATAAAACTTATGTGATAAAACAAATTTAAGATTAAGTTTCGAAAGTGAATTTAA
CDS sequence (LotjaGi4g1v0387700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAAAGGACCATTCTCCTTTCGCCGCTCATCCTCCCGCCGCCGCTCTAAGAAGGCCACGCTGCCGCCACAATCGCC GCCGCTCCATGCGACCGAAATTTCCGGCTCGCCGGTCGATAACCGCTTGGTCCTCGGCGGCGGTAGCAGCGGTACGGTAA CGAAGGCGAAGAAGAAAACCGGCGGTGCCAGGCTGTGGATGCGGTTGGACCGGGCGGGGAAGTCGGAGCTCGTGGAGTGG GATAAGAACGCGATCATCCGCCATGCGTCGATTCCCGCCAGAGACTTGAGGATTTTGGGCCCTGTCTTCTCTCATTCCTC CAATATCCTCGCGAGGGAGAAAGCGATGGTGGTTAATTTGGAGTTTATAAAGGCTATTGTAACTGCTGAAGAAGTGCTTT TGCTTGATCCTCTTCGCCAGGAGGTTCTTCCGTTTGTTGAGCAGCTCAGGCAACAGCTTCCGCATAAAAATCAGCCTAAA CAGCTTCTAGGGCCTGCAGATGAACAGGAGAGTGAAATGCAGGTTTCTACTGGCAGACAATGGTTACCTGTGCCGGAGGC TGCGGAAGGTTTGCAGTCAGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAAGTTGTCTGCACGTATCTGG ACTCGAATGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTTTTAGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTC GAACATGTGCGGAGTTTGAAGAGCAATCTTACTCGTTTGCTCGCACGTGTGCAAAAGGTGAGAGATGAAATTGAACATCT ATTAGATGACAATGAGGACATGGCACAACTATATTTGACTAGGAAGTGGTTGCAGAATCAACAATTTGAGGCTAATTTGG GAGCAACAACCTCATATAACCTTCCAAATAATGCACATGTTCGCCGAGTTGGTTCTACCAAAAGTGGAAGCCTTGTGACC AGCAACTATGAGGATGATAACGATGTGGAGGACTTGGAGATGTTGCTTGAAGCGTATTTTATGCAGTTGGATGGAACTCG TAACAAGATATTGTCGGTTAGAGAATACATCGATGACACCGAAGACTATGTCAACATCCAACTTGATAACCATAGAAATG AACTTATTCAGCTGCAGTTGACATTGACTATTGCATCCTTTGCTATTGCTGTTGAAACTTTGATAGCCGGTGCATTTGGT ATGAATATTCCTTGCCATTTATATAACACTCAAGGAATATTCTGGCCTTTTGTGGGGATCATTTCTGCAGCTTGCGTATT GCTTTTCCTGCTTGTCTTAGCATATGCTAAATGGAAAAAGTTGCTGGGATCGTAA
Protein sequence (LotjaGi4g1v0387700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKGPFSFRRSSSRRRSKKATLPPQSPPLHATEISGSPVDNRLVLGGGSSGTVTKAKKKTGGARLWMRLDRAGKSELVEW DKNAIIRHASIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKNQPK QLLGPADEQESEMQVSTGRQWLPVPEAAEGLQSELPFEFQVLEIALEVVCTYLDSNVADLERGAYPVLDELARNVSTKNL EHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEANLGATTSYNLPNNAHVRRVGSTKSGSLVT SNYEDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAVETLIAGAFG MNIPCHLYNTQGIFWPFVGIISAACVLLFLLVLAYAKWKKLLGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 379 | 379 | - | – | |
| MobiDBLite | 1 | 40 | 40 | - | – | |
| PANTHER | 14 | 443 | 430 | 4.1E-209 | – | |
| PANTHER | 14 | 443 | 430 | 4.1E-209 | ||
| CDD | 66 | 441 | 376 | 3.47208E-124 | ||
| Gene3D | 66 | 137 | 72 | 6.0E-8 | – | |
| Coils | 243 | 277 | 35 | - | – | |
| Pfam | 324 | 437 | 114 | 2.0E-8 | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| SUPERFAMILY | 380 | 432 | 53 | 1.23E-6 | – | |
| Phobius | 380 | 401 | 22 | - | – | |
| Phobius | 402 | 412 | 11 | - | – | |
| Phobius | 413 | 436 | 24 | - | – | |
| TMHMM | 413 | 435 | 23 | - | – | |
| Phobius | 437 | 444 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0387700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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