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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0391300 |
| Transcript ID | LotjaGi4g1v0391300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6; TrEMBL-Plants: tr|I3S5A3|I3S5A3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0391300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77002107..77003525) extracted from Lotus japonicus Gifu genome v1.2.
CACAAAAATAGTGCCACCTTGATTCTTTGCATGCGCGCACTGCGCACCACGCGTACTTCCTTCTTTGCCAATTTTCATAA TAATCATCACAAACGACGTATCTAACTATCTATCACCTTTTTCCGCTTTAATTCACTGAAATTTCGTTTCATTATATTGG TTTAGTTTTTCTTCTCTCTCATTTTTGTGTTTCAAATTTCTGTTTCCAGAACTTTTCATGGCCCCCATTTCTCCCACACC ATCCAAAACACAAAAACCAAAATAACAATGCAAACTGAGCATAACTACATCATCAACCATAAGCATTTTACACGGATATG AAACTCACGCTCACAAAACCATTCATCCTAAGATGCTTCCTCATCTCACTCTTCCTGTCCCTCCCTTTCCTCTTCCTCCA TCTATTCTCTCCACAACAACAACAACAACCTCAACATTCTCATTCCACAACAAAAGATCTCACAATCCGACCCGGTTACA CCTCCTACGAGACCTACATACAACGCCAGCTCAACAAGACCCTCAACCCAAGGCTCCGAAAGATATGGACCACCCGCGAC TGGAACCGGAAGATCCCCGTCTTTGCGCGGTTCTTCGAAGACCTCAAGGACAAGAGCCTTCTACAAAACACCTCCAAGGC CCTCTGCATTGGCGCACGCGTGGGTCAGGAGGTGGAGGCCCTACGGCGGGTAGGTGTGGTTGATTCTGTAGGAATCGACT TGGTCCCCTACCCGCCATTGGTGGTGAAGGGTGACTTTCACCACCAACCGTTTGGTGATGAGACGTTTGATTTTGAATTC TCCAACGTGTTTGATCACGCATTGTACCCACAGCGGTTTGTAGCAGAGATTGAACGCACGTTGAAGCCTGACGGTGTGTG CGTGCTGCACGTGGCGCTTTCGCGTCGCGCCGATAAGTACTCCGCTAACGACCTCTACAGCGTGCAGCCTCTCGTAGAGC TTTTTAACAAATCAGTTTTGGTTCATGTCCGCACCGTTGATGGTTTCGGATTGGACACGGAGGTTGCGTTTCGAAAGAAA CATAAACTGCAAACAAATCGTTAACCGTTTGTAACTACTTTCTCTCCCTCTCTGTTTTTACTTTTTCTTTTCTTTTTATT TTCCCTTTATCAAACGGTGGTTATTCCCTCTCTCTTCTTTCTTTAGTTATGTGTTCTGGGTAAATTTGAATGGATCTTAT AAATTAAGTGTGTACATTGTTTTGTTGTTTGAACAAGTTGAATGCTACGTTAGTGGTGGATGATGGAGTATGCAGTTTTT TACTTTCAAAATAAGCTTATTGTGCCTGTGAATTTGTTCTTTTATTCTTTTCCGATTTCTAGTATCCTTCCACTACTTAA TAGGTGAAAGATTAATTTCCTACATGAATGTCACGTATTAAAGTAGGGACCAATGCTTG
CDS sequence (LotjaGi4g1v0391300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACTCACGCTCACAAAACCATTCATCCTAAGATGCTTCCTCATCTCACTCTTCCTGTCCCTCCCTTTCCTCTTCCT CCATCTATTCTCTCCACAACAACAACAACAACCTCAACATTCTCATTCCACAACAAAAGATCTCACAATCCGACCCGGTT ACACCTCCTACGAGACCTACATACAACGCCAGCTCAACAAGACCCTCAACCCAAGGCTCCGAAAGATATGGACCACCCGC GACTGGAACCGGAAGATCCCCGTCTTTGCGCGGTTCTTCGAAGACCTCAAGGACAAGAGCCTTCTACAAAACACCTCCAA GGCCCTCTGCATTGGCGCACGCGTGGGTCAGGAGGTGGAGGCCCTACGGCGGGTAGGTGTGGTTGATTCTGTAGGAATCG ACTTGGTCCCCTACCCGCCATTGGTGGTGAAGGGTGACTTTCACCACCAACCGTTTGGTGATGAGACGTTTGATTTTGAA TTCTCCAACGTGTTTGATCACGCATTGTACCCACAGCGGTTTGTAGCAGAGATTGAACGCACGTTGAAGCCTGACGGTGT GTGCGTGCTGCACGTGGCGCTTTCGCGTCGCGCCGATAAGTACTCCGCTAACGACCTCTACAGCGTGCAGCCTCTCGTAG AGCTTTTTAACAAATCAGTTTTGGTTCATGTCCGCACCGTTGATGGTTTCGGATTGGACACGGAGGTTGCGTTTCGAAAG AAACATAAACTGCAAACAAATCGTTAA
Protein sequence (LotjaGi4g1v0391300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLTLTKPFILRCFLISLFLSLPFLFLHLFSPQQQQQPQHSHSTTKDLTIRPGYTSYETYIQRQLNKTLNPRLRKIWTTR DWNRKIPVFARFFEDLKDKSLLQNTSKALCIGARVGQEVEALRRVGVVDSVGIDLVPYPPLVVKGDFHHQPFGDETFDFE FSNVFDHALYPQRFVAEIERTLKPDGVCVLHVALSRRADKYSANDLYSVQPLVELFNKSVLVHVRTVDGFGLDTEVAFRK KHKLQTNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 243 | 243 | 1.0E-123 | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 1 | 243 | 243 | 1.0E-123 | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 9 | 30 | 22 | - | – | |
| Phobius | 31 | 248 | 218 | - | – | |
| Gene3D | 84 | 236 | 153 | 1.3E-11 | – | |
| SUPERFAMILY | 86 | 229 | 144 | 4.09E-14 | ||
| CDD | 107 | 194 | 88 | 4.23399E-4 | – | |
| Pfam | 111 | 190 | 80 | 1.1E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi4g1v0391300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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