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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0393200 |
| Transcript ID | LotjaGi4g1v0393200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lysine ketoglutarate reductase trans-splicing protein (DUF707); TAIR: AT1G67850.1 lysine ketoglutarate reductase trans-splicing protein (DUF707); Swiss-Prot: sp|Q28EH9|NEMP1_XENTR Nuclear envelope integral membrane protein 1; TrEMBL-Plants: tr|I1K4F8|I1K4F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0393200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77150332..77154172) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGATTGGTACTCGCAGGTCTGATCCTAACTCTAATGTCAATGTTTCTTAAATAAATTTTCTGTGTGGTATTTAATA TTTGAAACTTTGTTCATATGACAATTGCATCTTTTTTACTGCAGCTCTACTAATAGAAAACCAAGTGACAGTATGAGGCT GGTTGTTACAACTTTTGTTGGAATAGTTTTTGGCTTCTTTATTGGAATATCATTTCCAGCATTAACTACAAAGGTGCAGA GTTTGACTATCTTCTTTTTAGGCTTTCCTTATGCTTGAGTGAAATGAAATTGATTCTTTAATGTTGTTGACCTTATAATA ATGGAGCTCTAACAGTGCTTAACAATTTTCAGTTAAATCTCCCATCTAGCCTGGCACCCTCCGTCGATGTCTCTTACATT GAAGACAAAGATGATTCTGGCCATGAACAATCTTTTATGAAGAACAATAGCAACTCATCACAATATCCGTTATTAAATGA TACGTTGAAGGTAGACTTCTCATCCTATCAGCCCTGTGAAGGACATTAAAAGTTACCGAGTTCGAGAGAGTTGATACCTG TACCTTCTACATTAAGAAGGAACTTTTTAAAATTAAATTATATAGTTGGAAGTTGGAACAGGTTCCATAAACTCATCAAT GGTTCATGCACCTTATGGGTTGACACGATGGATGGTACAGAAGGCAAGATGGGTTAGTGGGCAAGAGGGATGAAGTAATT TTGTAGTAATAGTTAATTCATAATTTTAAATCCTTGAGATTTTGAGAATCATGATTTAATGGTTTGTAGGCTTGTGGCAT ATGGGCTCCCAAGATTAAGCAGTGAGAAAATCAAACTTCTCCGAATAAATGTGCTGTCTCTCTCTAAGAAATCATTTTGA AGGAATTACTGTTGATAACGAGAGTAAAATTGACAGCTCTTCATTTCAGTCTTGCACCCATACACTCACACACTTAATTC AACATCAGTGAACTATTGAAGCTTAATGCATAAAGCGGAATGCCCTATGAACAGAATAGGCTGCCTTTATTAATTCACAT AATAACTATTCAATTATAAGGATAGAGTAAGAAATTACAACTGTGGTGATGTTACACAAGTGGGAAAGTCAATTAAATTA AAGCACACAGCAACAAAGAGGAGCATAGGGCCTCTTGCTTCTTTTGTCAATGACATTTAAGAATATGATTATGCATTATA TAATATTGGGAAAAATAGTGTGTCAAAAACTGAAAAATGGTTGCTGCATGTTTTCATGATTTCCTGCAGATTTGGATTCC ATCAAATCCAAGAGGCGCAGAAAGATTACCTCCTGCAATAATTCATGCTGAGTCAGACTTTTATTTGCGAAGATTATGGG GTCTGCCCAGTGGGGTATTTATCCTAAAACAGTTTATGTGCTTGGCAGTTAGCAGTAAAACTTTATTATTTTCACTCTGT TTTGGTGCAGCTGAGGTTTGAAACAGAAAATATTAATTTATGTGCATAGTTAAGTGCAGTCAAAATACAGATTAAGGTCA TGTTGCTACTGTAAATAAACCTTGAATAAGGTGTTTTACGTTTTTTGTTACTGGATTATTTGTTTGGAAGAGAACACCCC AAATCCAAGATTGAAACCATTTGGAAAAAAACAGATTTGTGTGGAAAACTTGTGTGGCACGTGCATTTTTTTTGCTAGAT TTTCTGCTAGTTGTATTAGGCTAATCTTTAAGCCATTAATGTGCAGTTTATCCATATCCATATACACAATTTGATAACAG TTGTCACTTACAGGATTTAACCTCAAAGCCCAAGTACCTTGTGACCTTCACAGTCGGTTACAATCAGAAATATAATATTG ATGCAGCTGTGAAAAAGGTCATCTCTTGGCTTCTCTCTGTCTCTCTCTCTCTCTCTCATGGCTTAGGTTTGTGTATGTGT CTCTAAACTAGATCTGTTACTTGTAACAGTTTTCAGAAAATTTCACAATACTTTTATTTCATTATGATGGTCGAACAACT GAATGGGATGAGTTTGAGTGGTCAAAGCAGGCTATTCATGTGAGTGTTCACAAACAGACCAAATGGTAAGAATTCATTTG CTTTATCATAAGTATTTGCTGACAAATTTTCCTTTGTGACTTGTACCATTGATATTGTTGGCTATTTCAATTATGTCATG TTATTAAGCATTTGATCGTTTTGTCTCCCAGGTGGTATGCAAAGAGGTTTTTGCATCCTGACACTGTTGCACCATATGAC TATATTTTTATATGGGACGAAGACCTGGGTGTTGAGCATTTCAATGCAGAGGAGTGAGTATTTGACATGATATGTATATG CTACACACAGTTTTTCAAATGATATGTTAATATGTGATTAGATGATAGTAAGAAATATTTATGTGACGGTGGACCATAAT CAGATTCGTCAGTATGTATATACCTAAGGATTTATTTTTGGTTTCACTCAAGTAGTTTGATATGCTCCTCCAATTTTAAT TGCAGATACTTAAAACTGGTGAGGAAGCATGGGTTGGAGATTTCACAGCCTGGTTTGGAACCTAATAGAGGGTTGACATG GCAAATGACAAAGCGAAGAGGTGATCGAGAAGTTCACAAGTAAGAATGATGAGAATCCTGTCCCAGTTTTCTTCTGGTCC TTGTTATGTAAAAGAATGTGCATAATTAGCTGTTTGTCTCTTTGATTTCTATTAGAGAAACAGAGGAGAAACCAGGATGG TGCAGTGACCCTCATCTGCCTCCTTGTGCAGCGTAAGTATCAGTTTGATGCTATAGTCATATTATCAACCCATACCATGC TGTATCTAATTCTGTTATGCATGCAGGTTTGTTGAGATTATGGCTCCGGTGTTTTCGCGAGATGCATGGCGTTGTGTGTG GCATATGATTCAGGTTAAATGTTTACTCTCTTTATTTTCCAAAAGCATATACATTGGTTATTTGTATATTGTTTGCTCAA TGGTGTCTTACTATTAATTCTTTCAGAATGACCTGGTTCATGGGTGGGGTCTTGACTTCGCACTTAGAAAATGTGTTGAG GTGAGCCCTTTATCTCATTACTTCAATTTTCTAATTTCTAATATTTTTATTGCAATTTCTACATGCTATGGAACAGTAGA CTAATACCTTAACTTTATTGTGTAGCCGGCCCATGAGAAGATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAAGGCA TTCCCTCACTAGGGAATCAGGTGATTTGTTTTCCATGATTATTCTTGTTAGACTTAGGCTGCGCTTGGAAGAGAGCATAA CAGTTTATGCAGGTGTTTGGATAAACTCATGAAAATAGCTTATGACCTTGACCTACGTATAAGCTGCTTCAAGTTTATTT TCACAAGCTTCACAGATTAGCTTATGAATAAACATTTATGCCTATCTATAAGCTATTTTGAGCTTATTTCAATAAGCTTC TTAAATTAGCTTATGAAGAAGTGTTTTCCATAAGCTTAATTAAGATGTTTACCCAAATACACTCTTAATAATTGAAGTGC AGCTGAAAGATGCTTAATTGTTTCTGTGCTTTGGCAGGGAGAAGCAGAATTTGGAAAAGAGCCATGGCAGGGGGTATGTT TTGCACTTCATACAATTCGCCTTGTCTTTACAATCCATCTAATGTTTTACTTGCTTCAGTTGTGATTTATGTTTAAACTT GGATTATAAAATATATTATGTTGATGGTTTCATGGTGTTGGTGGCAGGTAAGGGAGAGGTGTAGAAAGGAGTGGACCATG TTCCAGAGTAGGATGGCGAATGCAGAAAGCGATTATTACAAGGCTGTGGGAATTGATTTGTTTAATTCGACTACTCCATA G
CDS sequence (LotjaGi4g1v0393200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATTGGTACTCGCAGCTCTACTAATAGAAAACCAAGTGACAGTATGAGGCTGGTTGTTACAACTTTTGTTGGAAT AGTTTTTGGCTTCTTTATTGGAATATCATTTCCAGCATTAACTACAAAGTTAAATCTCCCATCTAGCCTGGCACCCTCCG TCGATGTCTCTTACATTGAAGACAAAGATGATTCTGGCCATGAACAATCTTTTATGAAGAACAATAGCAACTCATCACAA TATCCGTTATTAAATGATACGTTGAAGATTTGGATTCCATCAAATCCAAGAGGCGCAGAAAGATTACCTCCTGCAATAAT TCATGCTGAGTCAGACTTTTATTTGCGAAGATTATGGGGTCTGCCCAGTGGGGATTTAACCTCAAAGCCCAAGTACCTTG TGACCTTCACAGTCGGTTACAATCAGAAATATAATATTGATGCAGCTGTGAAAAAGTTTTCAGAAAATTTCACAATACTT TTATTTCATTATGATGGTCGAACAACTGAATGGGATGAGTTTGAGTGGTCAAAGCAGGCTATTCATGTGAGTGTTCACAA ACAGACCAAATGGTGGTATGCAAAGAGGTTTTTGCATCCTGACACTGTTGCACCATATGACTATATTTTTATATGGGACG AAGACCTGGGTGTTGAGCATTTCAATGCAGAGGAATACTTAAAACTGGTGAGGAAGCATGGGTTGGAGATTTCACAGCCT GGTTTGGAACCTAATAGAGGGTTGACATGGCAAATGACAAAGCGAAGAGGTGATCGAGAAGTTCACAAAGAAACAGAGGA GAAACCAGGATGGTGCAGTGACCCTCATCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCGGTGTTTTCGCGAG ATGCATGGCGTTGTGTGTGGCATATGATTCAGAATGACCTGGTTCATGGGTGGGGTCTTGACTTCGCACTTAGAAAATGT GTTGAGCCGGCCCATGAGAAGATTGGAGTTGTTGATTCTCAGTGGATTATTCATCAAGGCATTCCCTCACTAGGGAATCA GGGAGAAGCAGAATTTGGAAAAGAGCCATGGCAGGGGGTAAGGGAGAGGTGTAGAAAGGAGTGGACCATGTTCCAGAGTA GGATGGCGAATGCAGAAAGCGATTATTACAAGGCTGTGGGAATTGATTTGTTTAATTCGACTACTCCATAG
Protein sequence (LotjaGi4g1v0393200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIGTRSSTNRKPSDSMRLVVTTFVGIVFGFFIGISFPALTTKLNLPSSLAPSVDVSYIEDKDDSGHEQSFMKNNSNSSQ YPLLNDTLKIWIPSNPRGAERLPPAIIHAESDFYLRRLWGLPSGDLTSKPKYLVTFTVGYNQKYNIDAAVKKFSENFTIL LFHYDGRTTEWDEFEWSKQAIHVSVHKQTKWWYAKRFLHPDTVAPYDYIFIWDEDLGVEHFNAEEYLKLVRKHGLEISQP GLEPNRGLTWQMTKRRGDREVHKETEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKC VEPAHEKIGVVDSQWIIHQGIPSLGNQGEAEFGKEPWQGVRERCRKEWTMFQSRMANAESDYYKAVGIDLFNSTTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 4 | 394 | 391 | 3.0E-223 | – | |
| PANTHER | 4 | 394 | 391 | 3.0E-223 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 40 | 21 | - | – | |
| Phobius | 41 | 396 | 356 | - | – | |
| Pfam | 94 | 380 | 287 | 9.8E-138 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0393200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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