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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0406900 |
| Transcript ID | LotjaGi4g1v0406900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid lipid-associated protein; TAIR: AT5G09820.1 Plastid-lipid associated protein PAP / fibrillin family protein; Swiss-Prot: sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic; TrEMBL-Plants: tr|I3STX1|I3STX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0406900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78326391..78331520) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTGAGTTTTATTCTTTCAAGGCAATTAACCTGCAAACCTTTATCGGCGTGTGAACAACGCGGAGTGAAGACGCGAGC GAACATAACATATATTTACCATATCCGTTTTGACGAGAGAGAACTGAGAAAGAGAGATGGGTGTGACGAAGGAACAAGTT GAATCATCCTTGAAGGCCAAACTCAATCCTTCCCATATCGTAAGCCTTTCTTTCCACGCTTTTAGTTTCAGTTTTCATCA TATATGACTCTCTGTGCTAGCTAGGTTTTCTCACACTCTCCATTTGCTACTTGAAGTGTGATTTGTTCTCTTATCTCGTG ATATTAGGCACTAATCTGCATTTGTTATTTATAATATTTAACCAGTGTGACTGTGCTGTATCCATTAGTTCTGCCATCTG GATTAATCAACCTTCAATCAGCGGTTTATTTATTATGAGAAATAGGGATAATTTTTCAAAACCCTAGAAGTTTAAGATTT TACTTCTTTGTTTAATGAACTTGACAATTTTGTGTTCTGAGTTATTTTCTTATCTGCTGACATAAACCCTCTTCTACTAC GATTAGTGTATTCCATACTTATTTTGGTTGTGCGATAAGACGTGCTTTCTGGGGCTTCTCTCAATCTAAAACACCCGTGT GCTTTGTGATACTTATTGTTATCTATGACTGAGGAATCTATACAACAAATTTGGAATTTCCTTTGAACTAGAGTGAATTA TGTAGTTACCTGGAATTTGGCATACAGTAAACCCCCATTTTTTGGCAGGAGAAGAGCACACATTACAAAGCCATTAGGTT TGGCCTAAAGGCTAAAGCAAACCCCCATTTTTGTCCTCATCCTATGCCAGATTTTTCATTAGTCCTTAAACTAGAGAGAC ACGAATTGGTTGTGTTCTATGCTTTTGTCATTTACATTAGTCTTCTACCAAGGGCTAACGTGACCGGGAGAGAATAGGTT AAGGACCACTTCTTTAGTGCAGAGACTAACATGAAAAGTCTTGTCAAGGATGGGGATGAAAATTGGAGTTTACTTGTTTG GCCTATTTTCACAGTTGGTGCACAGCGCTTTTTGTTCAAACACAACCCAGAATTTTGTAAACTGTGACCTTTTATATGTA ATGTTAAGGATGGAAATGAATAAACTTGAAGGGGTCATTATTAGGGTTTACGGCTTGTCTTTCAAAAGCTAACCCTCCAT TTAACAGTTTAACAGTATACCTAGGTTCATTGGTGTTATTATACTGTAATTAGTATTTGACCTGCTCTCGTCCCTTTTTC TTCTTTCAAATTGTTTATGTTCTTATATATATTTTTAATTTGTGTTTCAGGAAGTAATTGATACATCTGGAGGGTAAGTT TTTCTCAACAAACAGATTTTGTATGTGCTGCTTTGTAGCATGGCTTACTTCTCCCTTTGTAACATGCAATCTTATAATTT CAATGTGGGTATTATAGGTGCGGTGCGAGTTTTGTAGTCGAGATTGTGTCTGAACAATTTGAAGGAAAAAGGTTACTTGA TAGGCATCGAATGGTGAATGCTGCCTTAGAGGAGGAAATGAAAGAGATTCATGCTCTCTCTGTAAAGAAAGCTGTAACCC CAGAGCAGTGGAAAAAGCAGCAGGAGTCCAACCAATCAAATCCTGCTGCCTAGAGCTTATTTCTCAGTTATAATAGTATT TACAAATAAGAAATCCATACATTCTGTTGCTGACCATGCTTGTGGATCATAGCTAATTGTACTACTAAATTTTGGTTTAC AAAATTTGACTCAGTAAGTGATTGTATGATGATATGTTTGACCTATACTTATTTGGGAATTGTTAACTAGAAGAGTACAT GTCCACATGCTCGTTTGAGATGAAAGTTGGGAAAATTGAAGGCAAAGTAAAAGTCAGCAGTATATGAAGCATTCTTGCAT ATGTAGATGCATTAGTCTTCTCTATTTCTCTTTTAACTTAAAAGTGAATTTTTCTTGTGGAACTTCTTGTTGACTTGCAA AATTTTATTTTACACGCTGGGGATTGTTTAATTGAACATCCTTTGCCTTGCAAAACTTTCATATTCTTCTTATCTTAGGA CACATGGTTCAAAGATGTCTTGCAGTTCTGCACTTTCCTTTGCAAATGAACTTGGCAGCTTGAGATTTTTTTTGTCCTAT CTAATGCTCCACGTTATGTGCGATTTTCCTATCAATTTAAATTGTTTGCAGGCATACACTGCTGAAGTCTTTGGAATGAA GACTCTAAGTTGCACAAAGATTTTTCTTTATAAACTTCAAAAAGTTAACCAGCAAACTTTTTACTGCAATATTGTTGGTA CTCAACTTTTGCACACTAATATTTTTCATATTGGAAGGTGGGGTTTCTGAGTGGGCTAGTAAGAAACCAATGGGAATGAA GTAAACTGTCAAACTAGTTTTGAAAGATATCAAATTTACATATTAATCCTTAAATGATGGAAATTAGTGTTTGAATGATG TTATGCCTGTTAAATTAGTCCGTAAATATGTGTTCTACTATTAGGCCGCGTTTGGAAACACAGCTTAATTAAGCGCTTAT GATCATAAGCGCTTATGATATAAGCGCTTATTCATAAGTTATTTTAAAATATTTATTGACATAAATTGAAAATAAGCTAT AGATAAGCATAAGCTCTTTTTCATAAGCTATCCTGAATAGCTTATGAAAATAAGCTCAAAACAGCTTATGGTAGACTATA AGTTGTTTGCATAAACTCTCCCAAACACTGGCATAAGAACTTGTGCTATCAGATAAGCTCAAATAAGCTCTTCCAAACAG GGCCTTAGTCAATTGAGTCCCCTGACTACTTGACATTCAGGGCCAAATTGACTGATATAGGAACTTTAAACGCAATTTCA ATTAATTTTGACTATTTACTTATCTATCCCATGAACTTGTGCTTTGGAATTCTGAACCACATGTCTCGATAGGCCTATCC ACAACAACCTTCATTGCATAAAGAGTAAAGACAACATGTACTCAGTTTCCCTTCAGCCGAAAAGTTTGGGGGCCATCTAT AACCAGATAGAGCAAATTGCAGGGTCACACCATGACTCTCTTCTCTGCTTCATCCTTCTGTCTCTCATAGTTTCATAGTC TCTTATGGTTAGTGAGTGCAGCCATCAATGACAAATTCCCATGTGAGTCCTCTGATTTCTAGAACCATGAATATCATGAA ACTGCAGAATTTTGTCCCAGCTGGAAATTGTTCAAGGATAAACACCACCTCAAGATTTGGTGAAAGAGCATCATGGTTTA GACCCATTACCATAATGAAAGTTGCAGAACAAAGCTCAGGCTTAGTTGAAGATGAAACACTTGCTCAGAAGAAAAGAGAA CTTTACATGGCGGTGGAAGGTATGTGAATGTCCACTTCAACTATTGTAAGTTTAGCATTTGCTTAATATGATTGAAAGTG TTTGCAAACAAACATGTTTTGAAGGAATCAATAGGGGGATATTTGGAATGCCATCTGCCCAGAAAATTGAAATTGAGAAT TTGGTGAAGCAGCTGGAATCTCAGAATCCAACACCAGACCCAACTCTGGAACTGGAGAAGGTATCTTCAATCCTTTCCTA TATGCATGTCATTGGCATTTTGGAGATTTTCTTAGTACATGTTTGGACATCATTCTGAAGTCAAAATCAATTATGAGGAG AAGCTTCTGTGAGCAATATCCGAGTGTCATAGCTAAGAAAAAAGAAATTGATTCAAACATGCTATAATTATGTTTCTATT GTTGGAAGGTGGCTGGGTGCTGGAGGCTTATTTACAGTACAATATCAATTTTGGGATCCAAGAGGACCAAGTTAGGCCTC AGAGACTTTATCTCATTGGGTGATTTTTTTCAGACTATTGATGAAGTCCAGGTACAAGTACAATGCAGTTCTCAATTTTG TATATGATATAGACTTGTTCTGAATTGAGAATTATTTGATAACATCAAACCTCAGAAGATACAAACTATGCATAGCTTCC ATTCATTTAAGTTTTTATTGAGTGAATCATCACTTTAGTCCCTAAAAAAATATTGAATCCGTCACTTAAATGCTTGAAAG ATGGAAATGACCCTTTTCATCCCTGAACGATGAAAAAGACAATGAATTTAATCATTTTCAGGGATTAAATTCATCTTTTA GAGATGGAAAATGTAATTTCCATAGACTAAAGTGACCGACCTGATATCTTTTAGGGACCACGGTGATGGTGTACTCGCTT ATATTTTTTTCTAGCTGAGTTTAAGAATTGGTGATGTGATTTCAAAATGGAGAGCAAAGCAGTTAATGTGATCAAGTTCA GTGCAAGAGGGTTGAGTTTGCTGTCTGGAGAGCTTAGCATTGAGGCCTCTTTCAAGATTGCTTCCACAACAGTTAAAGCT CCATTTCTTGTTTGGTCACTTACTTTATTTCTCTATGGTGAATTCATATTGATGCTGAATGAATAACGAGTTAATTGGTT ACTGCTTGATATTGACAGAGGGTTGACATCAATTATGAAAAATCCACAATCATTCCTGATCAGGTATGCTATTCAGATAT GACATTTTCATTTTTCAGGCTAATCAGATTTTTCACTCTAATTTCCTCCTTTCATGCACAGTTGATGAATTTGTTTCGGA AAAATTATGATCTTTTATTGAGCATCTTCAATCCAGAGGGATGGTTGGAAATCACGTATCCTATTTTTTCTTCACTTATT TTTTACAACTATATTAATATTGATGAAAAATGTAGTTATTTCTTAATTCCATTATCTCATAGATATGTTGATGATTCCAT GAGAATAGGAAGGGATGACAAAGGCAATATCTTTGTATTGGAAAGATCTGAAGATGATAATAACCCCTAGCCATCTTTTT GTGAGCCCAAAATATGCATTGTATTAAGAATTTTATTGGCCCATTCATTTTTTTGGGTTCAGAGGCCCATTCATGTCAGC ATTTTGTTGGCTCATTCAATTTTGGAAATAAGTCAGCATTTTGTCTATAAATATACAGTTTTTTTTAAGAAATAAATTTG GATTTTCTTCTACCTACTCGCTCTAAATCTTGAATGAATCAAGATTCTCTCATGCGAAAATTCTTTCGCATTCTCTAATG TTGAAATTTT
CDS sequence (LotjaGi4g1v0406900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAAATTCCCATGTGAGTCCTCTGATTTCTAGAACCATGAATATCATGAAACTGCAGAATTTTGTCCCAGCTGGAAA TTGTTCAAGGATAAACACCACCTCAAGATTTGGTGAAAGAGCATCATGGTTTAGACCCATTACCATAATGAAAGTTGCAG AACAAAGCTCAGGCTTAGTTGAAGATGAAACACTTGCTCAGAAGAAAAGAGAACTTTACATGGCGGTGGAAGGAATCAAT AGGGGGATATTTGGAATGCCATCTGCCCAGAAAATTGAAATTGAGAATTTGGTGAAGCAGCTGGAATCTCAGAATCCAAC ACCAGACCCAACTCTGGAACTGGAGAAGGTGGCTGGGTGCTGGAGGCTTATTTACAGTACAATATCAATTTTGGGATCCA AGAGGACCAAGTTAGGCCTCAGAGACTTTATCTCATTGGGTGATTTTTTTCAGACTATTGATGAAGTCCAGTTAATGTGA
Protein sequence (LotjaGi4g1v0406900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTNSHVSPLISRTMNIMKLQNFVPAGNCSRINTTSRFGERASWFRPITIMKVAEQSSGLVEDETLAQKKRELYMAVEGIN RGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVAGCWRLIYSTISILGSKRTKLGLRDFISLGDFFQTIDEVQLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 154 | 147 | 3.8E-54 | – | |
| PANTHER | 8 | 154 | 147 | 3.8E-54 | ||
| Pfam | 67 | 154 | 88 | 1.6E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0406900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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