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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0412400 |
| Transcript ID | LotjaGi4g1v0412400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAC domain protein; TAIR: AT5G63790.1 NAC domain containing protein 102; Swiss-Prot: sp|Q8H115|NA102_ARATH NAC domain-containing protein 102; TrEMBL-Plants: tr|A0A0K2CTE4|A0A0K2CTE4_SOYBN NAC transcription factor; Found in the gene: LotjaGi4g1v0412400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78832976..78837428) extracted from Lotus japonicus Gifu genome v1.2.
CTGAACTTATTTTTTCTACTATCACATCTCTTCATTTATACCATTTAAAAATTGTTCTTGCATGGACTTAACACTTTCAT GTCTAAGGTTTAGAACTGTAAAGAATATACAAATAAGAATGAATGAAACTCGTCTCATTGAATTGAAGTTTAACCTTTCA CAATAAGGCTTGTCCAACTCGTAAGGGTCTCGTTTAAGTCCTAAGAGATGAACCCGCCTAAGACACTAACCCTTTCTACG TAGGTCGAGCCGCCCGATTTTCCAAAAATATATTGTCAATCGATCAAATGATTGTAGCTTTATATTGAACGGTCAAGCTG AGGCACATGTGGCAAGGTAGAACTGGACAGAGCAAGAAATGTTGGAGGCTGCAGAGCACTACAAACATGAACCATAATCC TGTTGCGTCGACCGATAACGACAGAGCCGCTACCATATAACAGTTCACTTCCCCAAACCCGGTTTAAAACATGACGCAAG CCGTGACAGAATCACCTTCTCGTGTCCCCGACCATCCACTCCTGTTCCGCCACGTGTCCATCTCGAACTTCGAGGGTTCT CAAACCCACGTGTCAATTACACTTTTTCTCACCCTATAAAACACCACGCGCTCCCTCTCTCAAAAGTTCGAACTTTCAAG CCGCCACCAAAAACCAGAGTCATCACAAGGAAGAAGAAGAAGAAGAAGAAGAAAACTCAAACCCACACGAATGCAAGGTG CATTGGAATTACCACCTGGTTTCAGATTCCACCCCACTGACGATGAACTTGTCAAACACTACTTGTGTGCCAAGTGTGCT TCTCAACCCATCAATGTTCCCATTATCAAAGAACTCGACCTCTACAAGTTTGATCCATGGCAGCTTCCAGGTAATTTTCC CTCCCCTTCAAACAAATTCATTCATTTTCATTTTCAACCAATAAACAAAAACAGAGTAAAAACAGAGTAAAAACAGAGCA ATTTCTCATTACCATTGTTACTTTGTATACAGATATGGCTCTTTACGGTGAGAAGGAATGGTACTTTTTCACTCCCAGGG ACCGGAAGTACCCCAACGGTTCACGGCCGAACCGGGCTGCTGGAACCGGGTACTGGAAGGCGACCGGAGCGGATAAGCCG ATCGGAAAACCGAAGACTCTGGGGATCAAGAAGGCGCTGGTTTTCTATGCAGGGAAAGCACCTAAAGGTGTGAAGACTAA TTGGATCATGCATGAGTATCGTCTTGCCAATGTTGATCGATCTGCCACCAAGAAAAACAACAACAATTTAAGGGTATGTC TCTGAATCTCACCAAGTTCTTAAAAAATGGTCAAAATTTGATGTTTTTTGTTTTCAATGGTTGACATGGTTTGATTGATT TTGATGATTGCAGCTTGATGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATATGAGAGTGTGG TTGGGGTGATGGATCATTTTTCTGAGGAGAATCATGAGATGAAGCCTGAGATTAAGATGTATGGCCATGATGATTTCAGG AATGAGCACCAGCTGTATACGGATACATCAGATTCGGTTCCAAGGTTGCACACGGATTCCAGCTGCACGGAGGAGCACGT GCTGTCGCCGGAGGTCACGTGCAGCAAGGAGGTGCAGAGTGAGATCAAGTGGAATGAGCTTGACCCAGTTGCAGCCTCCT TTGATTTTGATATGAATTTAATAATGGATAACACCAACAATCACAACATGAACATGAACATGAACATGTCAGCAGTGGTG GATGACCCTTTTGCCCCTCAGGTTCAGTACCAGATGAACCAGCTCTCTTCACATTTTGATTCATATTCTTTTTGGAACAC TTAGAGGATGAAATTATGAAAGTGACCCACAAGTTTCCATTCACACCAACCTAACTACTGTTACTGCAAGTGGACTAATG GAAGTGATGCCTCACACAATGGTGGGGATTGTTGAAGTTGGCTGTTATTTGATTGATTCAGGGAAATTGAGATCTTTTGA AACTAGAACAATAAGCAGTTAATTTGATCTCAAATGGGGTGAAGAATTGAAGATCCAAATAGTCATTTTAGGATATTGTA GAAGATTCTTGTTTCAATGGTATTGTGTTAGGATTTTTTTATATGGTTATGAAACAATATGTATAATATATCTTTTTTTA GTTATATTTCAGAATGATTCAGTTTAAAAGTTATGTTCGCAGAAATATAGTAGTGGTAAGGCTAAACTTGTTGATATAAG GAAATTAAGTGGTCAGATCAGGCTATGTCTGCTTTAAACTAGACTTTTCAAAAGTCTAAAAAATACCAAGTTGAGAGGAA GGAGGCTTTTGGAATGGTGTGGAACAGCATATGCCTCAGAATTCTATGCCCATGGTTGACAGTTTGAACCTTAAAACTAA CATATCTATGAAGGAAAATGACATTATAAGAAAAACAGAAACCTGTTGGAAAATAGTATATAGTTTACATGATAAGTACA TCTATTTCTTCAGCAGTCAAACTTGAATGATCCTGACATCGTTCAAAAGGAAGCTGCATGAGACCTGCCACCTAATTAAA GAATAATTGATGCATGTCTCTATCTTGCATAAATTTGCTTTTAGCATATTTGGATCTGTGAATGAGAGTCTAGTTATCAC TTATAGTAAGAAGCTACCAAGCGTAGCATATAGAGTTACTGTGTTTTGAAATTGTCTTTTCCCTTCAAGTTCTAAATGAA TGCCTCACAGTCACAGGCACACAGCAATGTAGTGAAGCTAATGTGTTATGGCAATTTACTTCTCTAACCAGAAGGAAATA AATAATATATCTGGATCTCTATACTCTACAGCAATATGTTATACACAAGGTTGAATAAGTATTCACAAATCATAAGCAAG TAGACATCATACACTCTATAAAGACAATACATAAGTAGTGTTATCACCCTGCTCTATAAAGCACAGGTCATTATCCATCC TCTTGATGATAGCAACGCTATGCATGTGTGGATTAAGCATTTTTTTATGATCAAATACTAAAATCTCTAGATCTTGGAAC ACGGTCGCAATCCGCAGCTCCCCACCCAATCGACAGCTTCTCATTGTCAAATACCATCACTTTGTCTTGCATTGATATAT CTGCATAAACAACACCAGGACTTGTATAATGCAGAGTTTAAGAAGCATTTTGTTGGAAAAGTGAAGAATTGTAATGCTAG TAATGGTTAGCATGTTAAGATCAGTTTCTCTTTCATCAGAATCAATTCTGAAATCTAGAAGTTAAACACACAAGCTTCTC TCTAGAATTGATTCTGAAGAGTCTTCAGAACCAATTGTAGAAGGGTTTCCAAACACACACAATATTCATTAATCATTATC CAAAAGGAGAGAAGCAGAAGAAAATAAAAAGTGACAACATAACAAAGTTCTCACCTCCAATTAGGTTCAGTTCCCCCAAC CCTACTTCAGGGCCATTTAGAATGCCTAGACAAACATTCCCAAAGTTCTGGCATGGCAAAACAAATAGTTAGCATTCACA CATGACACATGAAATGCATGTTACATATGATAGGAGACACTTGTAGGTTAGAACTCACTGATATTATCAGATAACCTTCA GGAGGGATCTCAAATTGAGTTTTAACTCTTCCACCATTGGTGAAACTAAGTGCTAGAGGCTTGAAGTATTTCTTGATTTC ACTCATGCTTCTGAAAGGTCTTCTACCGTGCCAGCAGACAGGTAAAGTCTGATCATCAGGTGCTACTTTTATGGGTTTTC CAGTTAATTCCTTCTTCAACTGCATTTGAAAATTAAACAAAACACCAACTTAAGTTACCAGCCAATATTTTCTGGTATTA CTGAAGAAAGTACTTCATTTATTTTTAAGTTGAGTATGTTTTCAGTCTCTATAAAGGTCTGAAATTTTGATTTTGGTCTC TCATTTTCAAATATCTTGTTTTAGTCTCCTAGACATTAGATCAAAACTATTTTGCGCATGTTAGAAACTCCTTCTACAGT TGATTCTAAAGTCAAAATCAACTTTCTAGCATTTGAGTTTCAGGATTGAATCTGAAAAAAAGAAGATTTGATCTAACCAT GCTATTAATGATGGTGCATATAACAGAATATGGCTTAACATCAAGGACTAAACATATTTCACCCTTTAATTTTTTCATAC AATTTTGAATCTTGAATCATGATATTTACATGATCTTTAGCAGAAATGCCTCATACTTATAGAAATACTTCAAATAGGGA AATATGGTGAGATTTTAACTGACCCAAGAAAGTAATGCTTGGTAAGCCTGAGAGTTAAAGTAAGTGTAAGAACTCCCAGT GTCAAAAACAGCAGTAAGACTTCCCACCCCACTCTTCCTTCCTCCCAAAACAAGTTCAGCTGGCCCTGCTGAGTAATGTT TGCTGAAACAAACCACACATAGGATTTTACATCAGCAGATAGAATTACGAGTC
CDS sequence (LotjaGi4g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAGGTGCATTGGAATTACCACCTGGTTTCAGATTCCACCCCACTGACGATGAACTTGTCAAACACTACTTGTGTGC CAAGTGTGCTTCTCAACCCATCAATGTTCCCATTATCAAAGAACTCGACCTCTACAAGTTTGATCCATGGCAGCTTCCAG ATATGGCTCTTTACGGTGAGAAGGAATGGTACTTTTTCACTCCCAGGGACCGGAAGTACCCCAACGGTTCACGGCCGAAC CGGGCTGCTGGAACCGGGTACTGGAAGGCGACCGGAGCGGATAAGCCGATCGGAAAACCGAAGACTCTGGGGATCAAGAA GGCGCTGGTTTTCTATGCAGGGAAAGCACCTAAAGGTGTGAAGACTAATTGGATCATGCATGAGTATCGTCTTGCCAATG TTGATCGATCTGCCACCAAGAAAAACAACAACAATTTAAGGCTTGATGATTGGGTGTTGTGTCGAATTTACAACAAGAAA GGGAAGATTGAGAAATATGAGAGTGTGGTTGGGGTGATGGATCATTTTTCTGAGGAGAATCATGAGATGAAGCCTGAGAT TAAGATGTATGGCCATGATGATTTCAGGAATGAGCACCAGCTGTATACGGATACATCAGATTCGGTTCCAAGGTTGCACA CGGATTCCAGCTGCACGGAGGAGCACGTGCTGTCGCCGGAGGTCACGTGCAGCAAGGAGGTGCAGAGTGAGATCAAGTGG AATGAGCTTGACCCAGTTGCAGCCTCCTTTGATTTTGATATGAATTTAATAATGGATAACACCAACAATCACAACATGAA CATGAACATGAACATGTCAGCAGTGGTGGATGACCCTTTTGCCCCTCAGGTTCAGTACCAGATGAACCAGCTCTCTTCAC ATTTTGATTCATATTCTTTTTGGAACACTTAG
Protein sequence (LotjaGi4g1v0412400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQGALELPPGFRFHPTDDELVKHYLCAKCASQPINVPIIKELDLYKFDPWQLPDMALYGEKEWYFFTPRDRKYPNGSRPN RAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSATKKNNNNLRLDDWVLCRIYNKK GKIEKYESVVGVMDHFSEENHEMKPEIKMYGHDDFRNEHQLYTDTSDSVPRLHTDSSCTEEHVLSPEVTCSKEVQSEIKW NELDPVAASFDFDMNLIMDNTNNHNMNMNMNMSAVVDDPFAPQVQYQMNQLSSHFDSYSFWNT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 298 | 297 | 1.4E-130 | – | |
| PANTHER | 2 | 298 | 297 | 1.4E-130 | – | |
| SUPERFAMILY | 3 | 159 | 157 | 9.42E-61 | ||
| ProSiteProfiles | 7 | 159 | 153 | 59.207 | ||
| Pfam | 8 | 131 | 124 | 1.4E-38 | ||
| Gene3D | 16 | 165 | 150 | 1.5E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0412400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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