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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0422500 |
| Transcript ID | LotjaGi4g1v0422500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|Q55CU8|RSC5_DICDI Random slug protein 5; TrEMBL-Plants: tr|A0A072TVS7|A0A072TVS7_MEDTR Polyphosphoinositide-binding protein; Found in the gene: LotjaGi4g1v0422500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79746568..79752223) extracted from Lotus japonicus Gifu genome v1.2.
GTGCATGCATAATGACCCAAAACCCCTTAATTATTGAATGTTGGTTAGCCCAATTAGTTGTCGTTAATAAACTCCGAAAC TAGTGGCGAAAATGAAAGTCCATAATCAAATTTAGAACTGATCAACATCCATCTCAGAATTAGAACAAGCATTAATTGCT ATGAGAACTCTACTTTTCCTACATATACGTAACATACCAGCTGGAACTTCATTCAAAGCTCAAACCTTGCTTTCGGTGCT TCTTCTTCTTTTTCACTGTACGAGAGGACAAAGAAGAAGAAGAAGAAAATGGATGTTGGAGTGAAAGTCGACAATACTGA ACTCACCAAAATTCGCCTTGTGAGACGCTTCGTTGAGTCTCAGGATCCCTCTTCTAAGGTACTACTACGTTAACCATTCT CTTAAGCACTGTTTGTTTGTGTGAAAATTCTTTTAATTACACAAAAAAAATGAATAAAAGAAGTACTTTTAAGAAGGAAA GGGTCTTTTGGCTTTTCTGTTTTGGAATGCTCATCAGGTAGAAGATTGTTAATTAGTCTAGTCTTCATCCAAACACGTAT TTAGTTAGTTACAACGCAGTACAATTACATGTGTTTTAGGATGCTCCAGATTCAAGAAATAGAGACAATTTTTTTAACAA ATTAAATAATACTCCCTACGGATTCTCAAGGATTAGTTTATTTTGTACTTTTTCCCTCTACGGATTCTCAAGGATTTTTT TCTGATTTTTTTTTTATGAAACTAACCCTTCTTTTCCTTTTCTATCTCCAACATCTTGTATCCATCCAAATGCATGATTA ATAGCTAAATAGTACTTCATGTGTTTGTGTGGAGTTTGCTTTTTGTTGAAAGCAAAAACAACTCTTTTTTTTTTCTTTTC AGATATCTCTCTTTCATAAAACTGTATCTGTCTGTCATGACCTCTTAATAAATGATTTTATTAGGATTCGAATTGTGGTC TCATTCTAACATATATCTAGTTTATATATTGCTAGACAAACACATCTTGATATATAACTCACTTTTTCCTTTTTTTCCAA ACAGAAAAATAATTTTATTTAGATGATAAATTTTCTTGAACAAATCTCTCAAGCGAGTATTCTATAAAGGCCAAACCACC CACCACATTAATTAATGTCCCGAAAACTTAATATATTTAAACAAATGAAAGTCAAAACCCTTCCACTAATTAATAATCCA AATTCCAAGGAATCATAAACCACACAAAATTTCTTTAGCAAAGCTTCATCCATTTTTCAAAATAAATAGAAGTCCTCTTC TAAGATTTTATTACATATTCAAAACACACAATATACTTGCCAAAGCTTGGATTAGGATAAAAACAAAAAAAAAGTATAAT TTGTAAATTCAATAAGTACTAAGTTATAAATTTAAATTTATTAAGATACTTAAAGTTCGATTGTTGGAAGCTCCAGCACT GCCTTCACCCTTGATTATCATGTTGAATAAGATTTTTTCCATTATTTTGCACCTTTGGAGCATCTCCTTTAAACACATTC GGGGAAAAGCAAATTTATATGCTGATTGAGTAGCCTCTTTGGAGTTACGTTTGCATAGTACTCTTAGGATTTGATCTGTT CGATCCCCCAATGAGTTTGGTCCCCGCTTCTTGCCTAGGAGCTAATGCCTATAGCGGTGTTGTGCTATCTCAGAGTAGCA TTTTGTTTTAATATCGAATTCAAAAAAAAAAAAAAAATATCAAGATACTCGCGGTAGGTTAGTATAAAACATAAAGGAGA ACAAGAGATAACAACCCAATATATAGTACTAGAGGACAATAATAAGAACTTTTTTTTTACTCTCATTTAGTATATTGTTG TTGATTAAAGTGGGAAAGTAATAAATGAAATTAAGAAATACATATTTTAGTTCAGATATTATATTATTATATGTCAATAA AATATGATATGGCTACATAGTGTGGGTGGTCTAAGGGGATTACTTATTTTCTGTTTTTTTGTCCCTACTTGGGAGGGTTA ATGCTTATTATTCAATCAAATTCTCCTGTTCATTTTTTTATTATATGTCAATTATTTTTTATAATCATGTGCAGAATATT AAAAAAAAACAATAAAACTTATGAATCAAACTCTATTTTTGTTGAAAAATAACCGAAAAATAACCTGGGAAATGTTGTTA CTTTCTCTCTATTTTTGTTGTGCTTCTTAAATGCTGTAGTGTCAGTGAGTACAAAGACTTGAGTTTAAGTGGGGAATATC ATTTAATGCATGCAATATTATGCACCTACCGACTGACACAATGGGACCTGACGCCACATGCAGGAATAAAAATTTAAGAC ACTGTTTCAAAAAAAATTAAGACACGGCAAGGTAAAATTCAAGACATGCAGCTTGAATAATATTTTTTGTCTTATATTCA TTTTTATTATAAGATGATCAAATCACAAAATTTAATTAGATTTTTGTGGAAAATTTATTTAAAACCTCGAATTTATTTAC ACACTATTAATATATATTGTTATTAATTTTTTTAAATGTTATTAATACTTACTTTGGCATTTTTTGTCCAATATTATATT TTCTATAGAGTAGTTGAAATTCACATGAGATTCACTGAATTATATAAGTCACATCCTTAATTTGGTGGACTCTAATAAAT TTTAGTAACAAAAAGGTTAATGTTTTTTTTTTGAACTCAACAAAAGGTTAATGTATTAAAACAAAATGCTAACGTGAATG TTGATGAGGGTACTAATAATCTAATATTGAATCAATGGAGGACTGAATTAAAAACTAAAAAGTTGAATTAGCACACAACT GCATAACCCATTACAATTGACCAAAAAATGATAAACCCATTACAATATTCCAATGGTTTTTGACCGAAAAAAAAATTACA ATGCTTTAGTCTTTTCTATTTTGGGTATTTTTCTATTTTCTTTAGTGAAGACCGGCATCGATGACAACGACAATTATATC TTTCTGTACTTGTTTTCTCTAGATGATTAATTTGGCAGATTGATAGGTTAAATACTACTTTATAATAAACAAAACCAACA CACTAAAAAAATGGGGTGCAACATGTCATATTCTGGATATTTACTCATAACATAAATTAAAAATAATATATGGTTCACGC TAGCTCCATGATAAATGAACAGCCTTATAAATGTCAACATCTAAGACAAGGGAATATTCTAGCATTATAGAAAATTGCTA ATTAATTACTCCTATATGATTTCTAAAATCAAACAAAAAAACTCATCCAGTTCGGTTTCTTAGTGGATCACTTTGGTCTC TCAGCTAATGGGCTAGCCGGCCCAAATGACTATGAGTCTTGCAACAAAAACATAATGATGCTAGCTGTTCACAAAGAGTT CTAAAGGACAAGGTCAACAAAAAGAAGTGCAATGCTTCTCAAGAATCAAAACCTTAAGCACGTTCAAAAAAAAAAAAACT TAAGCAAATGTCTTTTGAAAATTCAAAAATCATTTACTCCACCAACGTGAGCATCAATCTCCAAGGACTAGGGAATTGTG GAATTCCCATTAAATTTACACATGATGGACGAAATAGTGTTATCTAATAGTGTCTATTAAAAATTTAAAATTATGTTTGT TATGAGTGGAGCTAAACGTGTGGGATTGATTTTATATCTCTTGATTTCTACCACGGGCTATGTGAACTTCAAGATATTCA ACCATTGAGGAAAAATATTTTGTTGAGAGAAGTCTACTTACTTAATATGATTTCTGAGTGATGATTAGTCTCATAATAAC TGTCCGTACAAAAAAGAGCAGAACACAAGATATGCTTAAGTTAAACTTGTTGGCATTTGTACATATTGCAGGAAGAAGAT GACCTGACGATTAGAAGATTCCTGCGCGCTCGTGATTTAGATGTGGAGAAAGCTTCAGCAATGTTCCTCAAGTACTTGAA ATGGAGACGTTCCTTTGTTCCAAATGGTTCTATCTCTCTGTCTCAGATTCCTAATGAACTTGCACATGACAAGGCCTTCA CCCAAGGACGTGATAAGCAAGGTCGACCTATATTTGTTGTCTTCGGTCGAAATCATTTTCAAAACAAACATGGTCTAGAT GAATTCAAACGTATGAAATTTCCTATTCCTGAATGATCTTGTTGACATTATTACAATTTAATTTAGAGCCTAGTTATTTC AACTCTGTTTGTAACACAGGATACGTGGTCTATCTTCTTGATAAACTATGTGCAAGGTAATCCCTTTTCCAATATTAGAC CCTGCTTTTAAAACACTGAACCTTTTTTAGAAGCTTGAATGGATATTATTAGTAATGTTACATTAATTTTTGGTATCTGC AGCATGCCACCTGGGCAAGAAAAGTTTCTTGGCATAGCAGAACTTAAGGGATGGGGATACTCAAACAGTGATGTACGCGG GTACATCAGTGCTCTGTCCATTTTGCAGGTATGGTTTTCTATTATTCACCTTATTGCAAATGTGAGTAAGAAGTCGAATA TTATATAAAATAGATAATTTTGAACGATTTATAAATGAGCAGACCCAGTTCTAATAAATTAAGATTGAGTTAAGCATATG GGATGTTAATCAACTTGTATGGTTTGCTCTTAGCCCCTTGTTCACATGCCAAATAAAAGTAGTCATACATCAACTATGTT TCTTACTTGGTGCATCTTTTGCATAGATTAAGATCTTCTCCCCTCTAGTTTCACTAATAAGATTTTGTCACGTTAATTAA AAACTACTCTTGTAAGTTTTAACCAACCTATCCATATTTGTTTAAGTGACATGTCAGAATTTCACACATAAAATGTTGAA TCCAATTTCCCTATAGGTAAATTTTCTTAAATCATTGGTTAAGGGTTGAATAGCCAACTGATTGACTCAGATTTAAAATT ATTTTATTAAATATACAACTAGTTTAAATATGAGTGATCCAATCATATAATCAAACGACTGCGAATCTCTAATTGCAATG AATGTATGGAGATTTGCCTGCAGGGAATCCAAATCCTGAGTTGTGACAACAGTTTTTCTTCCCTTTTGCATATATTTGTG TGTGTTTACTTGGAAACTCTGTACACTCATAGCTTATGATCATTTTCTTGATGCAGGACTACTATCCTGAAAGGTTGGGG AAGTTTTTTATTGTCCATGCACCTTACATATTTATGAAAATTTGGCAGATCATTTACCCTTTCATTGACAATAAAACCAA GAAGAAGGTGAAGTTTCAAAATTAATTGTACCTCAATGCATGCTATGATTACACTATATGTTTGAGATGAAAATATTTAG AATTTGAGATTTCCTTTGCAGATAGTGTTTGTGGATAACAATAAGGTGAAATCAACACTGCTAGAAGATATAGATGAAAG TCAGCTCCCAGAGATTTACGGTGGCAAACTGCCATTAGTATCGGTCCAGGATAGCAATTAGCAACTAATTAAAATCACTG GCGAAATACAGAGTAACCATCATAAAAATAAATAAAATTTCTGTTTAGTTAATTACCGTTAGTGTTTGTTTTCCAGTTTC TTTGTACTCCAATAATTGACATTGTTGTTGTTGTTGTTGTATTAGCTAGGTATCATGAATAAAAATATTTCTAGTTTTAT GACGTGGTGATACTATCTAGCTCTTCAAGTTCTGTTTACTATTGCTTTGTCTTCAC
CDS sequence (LotjaGi4g1v0422500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTTGGAGTGAAAGTCGACAATACTGAACTCACCAAAATTCGCCTTGTGAGACGCTTCGTTGAGTCTCAGGATCC CTCTTCTAAGGAAGAAGATGACCTGACGATTAGAAGATTCCTGCGCGCTCGTGATTTAGATGTGGAGAAAGCTTCAGCAA TGTTCCTCAAGTACTTGAAATGGAGACGTTCCTTTGTTCCAAATGGTTCTATCTCTCTGTCTCAGATTCCTAATGAACTT GCACATGACAAGGCCTTCACCCAAGGACGTGATAAGCAAGGTCGACCTATATTTGTTGTCTTCGGTCGAAATCATTTTCA AAACAAACATGGTCTAGATGAATTCAAACGATACGTGGTCTATCTTCTTGATAAACTATGTGCAAGCATGCCACCTGGGC AAGAAAAGTTTCTTGGCATAGCAGAACTTAAGGGATGGGGATACTCAAACAGTGATGTACGCGGGTACATCAGTGCTCTG TCCATTTTGCAGGACTACTATCCTGAAAGGTTGGGGAAGTTTTTTATTGTCCATGCACCTTACATATTTATGAAAATTTG GCAGATCATTTACCCTTTCATTGACAATAAAACCAAGAAGAAGATAGTGTTTGTGGATAACAATAAGGTGAAATCAACAC TGCTAGAAGATATAGATGAAAGTCAGCTCCCAGAGATTTACGGTGGCAAACTGCCATTAGTATCGGTCCAGGATAGCAAT TAG
Protein sequence (LotjaGi4g1v0422500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVGVKVDNTELTKIRLVRRFVESQDPSSKEEDDLTIRRFLRARDLDVEKASAMFLKYLKWRRSFVPNGSISLSQIPNEL AHDKAFTQGRDKQGRPIFVVFGRNHFQNKHGLDEFKRYVVYLLDKLCASMPPGQEKFLGIAELKGWGYSNSDVRGYISAL SILQDYYPERLGKFFIVHAPYIFMKIWQIIYPFIDNKTKKKIVFVDNNKVKSTLLEDIDESQLPEIYGGKLPLVSVQDSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 6 | 239 | 234 | 5.1E-62 | ||
| SUPERFAMILY | 8 | 69 | 62 | 5.1E-15 | ||
| PANTHER | 9 | 239 | 231 | 3.1E-129 | – | |
| PANTHER | 9 | 239 | 231 | 3.1E-129 | – | |
| SMART | 33 | 58 | 26 | 1.7E-6 | ||
| ProSiteProfiles | 73 | 235 | 163 | 22.907 | ||
| SUPERFAMILY | 78 | 233 | 156 | 1.22E-47 | ||
| SMART | 79 | 232 | 154 | 1.6E-57 | ||
| Pfam | 81 | 230 | 150 | 1.1E-37 | ||
| CDD | 86 | 230 | 145 | 2.4222E-46 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0422500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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