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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0434900 |
| Transcript ID | LotjaGi4g1v0434900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat (LRR) family protein; TAIR: AT4G23840.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein; TrEMBL-Plants: tr|K7KRX4|K7KRX4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0434900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80836367..80841766) extracted from Lotus japonicus Gifu genome v1.2.
CGAAAATCATTTAGTGTGGTGAAGAATTTTCAATTTTCCTTATATTTATAGCTAAATAAAATTAGTTGGTTCTATTGCCA AAGGGCTGAAGCAGAAAATGTTTTAGGAAATTTCCCTGGTTTATTTTTCTCCCTCAGAAGCTCTTTCCTTGGGTCCGAAG ATTCGTTAGAAGCATTTATTTATGTGGATAGGTTATTCGCACTGAAGAAAGAAGCTCCCTCCTTCCGAAACTGAAGCGGT GAATTCAGACGCGATTCGAACCAAATCAAAGTCAAAGTCAAAGTCAAACTCAAACAGTAGCATATCATCTTCATCTTAAT TTGACAGAGATCAGAACAAGAGAGAGATTAGGGTTTGAAGGTGGAAGATGATGAACAGCGAAAGCGGATTGATTAAGCTC TGCATCGATGCGGCGTGTGACAGCAAAGAAAGCATCGACAGATGGCGCCTACAGAAACGCTCTCTCGATCGCTTGCCTTC TCCTCTCGCCGACGCTCTCATCCGCCGCCTCCTCAGTCGCACTCTCCTCCGCCCCTCCCTCCTCCAGTAACTAACTAACT AACTAACTTCTCACTCTTCCTCTGTTCCCCTCTGCCTTTTCCCTGTTTCTGAATGTGTATTCCTCTCCTTCAATTCTATG TTAGGGTTTTCAAACGCAGTGCCGAAGAGGTTGATCTGAGAGGCGAAAACCATGTCGATGCACAGTGGATGGCATATTTA GGAGCATTTCGCTACCTGCGCTACTTGAACGTTGCCGATTGCCATCGAATCACCAATTCAGCTCTTTGGCCTCTCACAGG TGAAAACACTGCACTCATTCTATACAACAATTGTTAATTTCTTCCTGCTATTGCTTTCAATTTTACCAGATTAGTGTGAA ATTCTGATGCTTATTATTGAATTGGTTATTGTAGGAATGACTAGCTTGAAGGAGTTGGATCTCTCTAGATGCTCCAAGGT TGATGATGGTGCAATTGACCATATTCTTTCAATTCCTAATTTGGAGAAGTTGCACATTTCAGAAACAAGTGTGACTGCCA AAGGGGTCAAGCTTCTCGCCTCTCTTGGGAACTTGTCTCATCTTGATTTGGGAGGCTTGCCTGTGGATGACATCACATTA ACTTCGTTACAGGTGTTTACCTTTTCCTTTGATTTGACACTAGGGTTAGCAAGTAAGTGATAATCAATCTTGCGCCAACC AATGACTTAATCGATTTAGTTAAAAATTATCACATAAAGTACTATTTTCCATATAGTTGTATAATTTCTTAGAAACTTGT AATGCAAGTTGAACATTATAATTAGGCGCAGTTCAACAGTCCTGGAGAGTATTTGAGTGAAGATGATCCATCTCTTGACC TAGGTTCCACTTTATCATCTATGTGGCTGACTGCTAGCATAGGAAAGCAATGTCTCCTTAAATGAGTAGATAGAATCTTA GGTGGAGAATCACCCATCATCCTTGTTTGTAACCCCATTAATTTAGCCGCATGTTATGCTGTTTGATACCTAATGTGGAC TTTTGCGCACAGACCGGCTAAAATGACCTTGACTTGTGTACCTAGTTATTAACCACAATAAGCTGTAACTCAGGTCATGT CACCTGAACAGGACATATCCTTACAACGTTGTTCGCTACACCACTGACTTTTATTTCTAAGTAGGACTTATGTGAAGATC ACTGGCCATGTTCTGCATCTAAACTTAAAATAACATCTTGTCAAATTCAGTATTTGTTGCTTTCTTTCATTGCTAGTTAG TTATGGTTTCATATTTAACTGGGTTGGGTTTAGCACTGTTTTCCAAGTTGTCGGACTCTAACATAGTTTTGAGCAATCTA TTTCACAGCATGCGCATTGAGAGACACATTTCTCAAGTGACTGGCTTGAATTCACTATTAGACATTCTTGTATTTTTTCA GTTACGGTCCAATGCATTGCAATTTCTCAAGTTATAGGAATGTTGATATCTTTTTAATGTTCTTTATTCTCTCCTTTTAA ACACCTCTTCTTAGGTGCTGAAGAAGCTACAATATATTGATCTCTGGGGTAGTGAAATATCAAATGAAGGTGCTGTTGTT CTTAATCTATTTCCGAGGTTAACCCATCTAAATCTTGCTTGGACGAATGTGACAAAATTGCCTAATTTATCATCTCTTGA GTTCCTGAACATGAGTAATTGTACTATCGACTCTATACTTCAAGATGGCAAATCTCCGTTGGCAAAGCTTATTCTCTCTG GGACTACATTCCTGAATGAAGCTGAAGCCTTATTACATATAAATACAAATTTTCTGTCCTATCTGGATGTAGCCCACTCT GGCCTTCACAGATTCTTCTTCTTAAGTAAAATGAAAGTAATAGAACATCTTAATCTCAGCTCGTGTATGAGCGATGATTC AGTTGAGATGGTCGCATGCATTGGTGGAAACTTGAAAAGTCTGAATCTGAGTTGTACTGCAGTCAGCTCTGCTGGACTAG GGGTTTTAGCTGGACATGTGCCCAATCTTGAAATTCTGTCTCTCTCTCAGACACCAGTGGATGATACTGCCATCCCATTT ATAGGCATGATGCCTTCATTGAAGGTGGTTGACCTGAGCAAGACAAACATTACAGGTATTTCATTACTTACATAGTTATT ACTATTCTGATGCATAAATTCATGAGGAGTACCTGCAGTTGCTGATATAGGTACTCATCTACTCAAAGTTCACTGTTTCT GCATCCATTAGTTGGGCCTTTCTTATGCTAGATCACTTGAAAACCTGTCTGTATGTGACAATTTTTCCTTTTGCATTTCT TTCCTTTTATTCAGGAAGAACAAGACATCTGTGCTTATGAACATTCTCATAAGATGCTTAAGATTCCTCCTCCTTCTGTT TCTAATTTTTTAAAATTTAACATTGATTTGTATGCAGATCTAGTTGATTTTGAAACCCTACTTAATTTTCCCGATTAAGA AATCTTATCTGTAATTAAACCAACTATTCAAATTTTCCTGTATGTCTTGCATGTATATGTATAGGGATAACAGCTCATTT GTGATTTGCCTGTTGTGTCTTGGTCTTTAGTTACCTTGTGGAATCAAGTGATTTTGTTGGATGTTTGCACAATAAATTTA AATACCTGTTTTCAGTCCTAAAAATCATGAAATATAGATTAATAAGAGGGTGTCTCACTGGTGAATGACAATCATTCATT CCATATCAAATTTTAGTTCTTTGACTTATTTGGTTCATAGTCTATATTCTAAGTGAGCTCTTGTGTGAAGGTGCGTGTTA GAAATATATCATAAATATGTCCTTCACCCAACAGCTTAAGCTTTTGGGATAATTGGTTCAGGACAGTTTCTAATTTCTCA TCTTAGTCAATGACTTAAATAGCTGGTCACTTTATTTCTAACATTCGATTACAGATTTATTGACTAAGCATTTAATTGAA GTGCATTATTTCAATTTAACTAGTAAGTCATATTCTTATGCATTTGGGGTTCAAAACGTCTAAATGCTAATTTCATCAAC TATCTCTTGTTTTGTTTGTACCTCTCCCTTTGTTGCTTGTAGTTTTAGTACTTCTTTAACCTTCCTATCTGTACTTTGGC CTCAGGTTTTTTGCCCCAGGGGGACAGGGACATCTCATTCTCTCTGACGGCTCTACAGGACCTTAAACAATTAGAAAGCT TGAATATGGAAGGCACACCAGTTGGGGGCTCAGCTTTGTACCCTTTATCAAGTTTCCAAGAGCTGAGATGCTTATCTCTT GAAAGTGCTTCACTCGCAGACATCACACTTTTCTATATATCATCAATTCCTAAGTTGACAAATCTTAGTATCTTGGATGC ACTATTGACAAATTATGGGCTTGATATGTTTGAGGCTCCTGAAACTCTGAAATTGCTGGATATCAGAGGTTGTTGGCTCT TAACTAAAGACACTATATTGTCATTCTGCAGAAATTATCCACAAATTGAAGTAAGGCATGAACTTCTTACTCTGCCTCCT TTCGAGGAAAATGCACTTCATTATTCCTCTCCATCTCAATCAACTTCAAGGACTCAGCAATCTGCCAAGAAGAAAGAGCA TTCCTCTCCGTCTCAATTAACTTCAAGGACTATGCAAGCATCTAAGACGAAAGAGGGAATATCCATATCTCCGTGTTTTA TAGGTAATTGCCAATCACCTTTCTATCTTTAAATTGCTAGTTTTTTTTGTTTCATCTAATTTTATTTTTTCATTTATTTT GACATAGATCAAAGGTTGAAGTATAGCAGAGATGAGTTACTCGCATTGCAATTTTCATCTTTACCTTTTGCATCCAGTAG TGAGAGTGACAATTCAATTTTTGAGAAGCAATTGGATTGAATGGAGCAATCTCTTTCCATATTCTCATTGTTTCTTTTCT TGTTTATTTCCTGATTATCATTGGTTATGCAATATTCTGTCGAGTAACCATGTAAGTGTCTCAATTGGTGAGGTTGGCTA CATGGATCACTTAATATCATAATTTCCTGTCATGCTTTAAGTTCAGAGTTGGACCAATTACCTCTGGTGTGTGTTTGGTT TCCAGTTTCGTTAATGTACAAGGGCGGCTTTTATCCAATCCTTCCCTTTACGTCCTTGAACTTTTTTGCATTAGAATGTT GCAGAACGCAGTTAGCCTCCTCTCCAACGTGTATCTAAACACGCCCTTATTCCTCTCTTAATTGTTTGATTTATGATTTT TCTTGTTTTCTATCTAATTCTAACTATTGAAGTGATCTGGTTCTTGTAAAATAAGAACATATTACTTTAATTTGATTTTA TTTGAATTCAGATAATATTTACTCATACGGTAGAATGATATTATTTCTACTTATCCTGGATATATGTGCATTCGGTTTCT TTGCAGTAAGGGGAACATGTATTTATTCATTATTATGAGAAAACAGCCTCAAAGATTAAGCCATCGTTTGGAACTAATGT ATTTATAGTTTTCTAGGTTTAGACATGACGAGAAAGATAAAATGTTTGAATATTTCCCAGGTAAATTTAACAATGTATCT TCTATTTATTCTCTCTTGTATCAGAAGATGAATATAACTTTCCATTGGATAACACTCTACTTCTATGGAGTTGGATCGCA GAGTGAAATTCGAGCGGCTTAGAATTCTATAAAGCTCTAGAGGTATTGGCACTCAAAAAAAATGTTAAGCTAAGAGGGCA AATAGCCCAGTTTTTTTAAAAAAATATAAAAAGTTAAGCTATTTATAAAAATACTAGTTAAAAATTTGACACTGTCAGTG GATCATTCTTTTTCTCAAAATAAATTTATGAGTTAATTTGTTATACTTGTGTGCAAGAGGGATATTGATCGTTTGCGACG GAAACAGAATCCGTCACCAAATCCATGTCAACATTTTGCG
CDS sequence (LotjaGi4g1v0434900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAACAGCGAAAGCGGATTGATTAAGCTCTGCATCGATGCGGCGTGTGACAGCAAAGAAAGCATCGACAGATGGCG CCTACAGAAACGCTCTCTCGATCGCTTGCCTTCTCCTCTCGCCGACGCTCTCATCCGCCGCCTCCTCAGTCGCACTCTCC TCCGCCCCTCCCTCCTCCAGGTTTTCAAACGCAGTGCCGAAGAGGTTGATCTGAGAGGCGAAAACCATGTCGATGCACAG TGGATGGCATATTTAGGAGCATTTCGCTACCTGCGCTACTTGAACGTTGCCGATTGCCATCGAATCACCAATTCAGCTCT TTGGCCTCTCACAGGAATGACTAGCTTGAAGGAGTTGGATCTCTCTAGATGCTCCAAGGTTGATGATGGTGCAATTGACC ATATTCTTTCAATTCCTAATTTGGAGAAGTTGCACATTTCAGAAACAAGTGTGACTGCCAAAGGGGTCAAGCTTCTCGCC TCTCTTGGGAACTTGTCTCATCTTGATTTGGGAGGCTTGCCTGTGGATGACATCACATTAACTTCGTTACAGGTGCTGAA GAAGCTACAATATATTGATCTCTGGGGTAGTGAAATATCAAATGAAGGTGCTGTTGTTCTTAATCTATTTCCGAGGTTAA CCCATCTAAATCTTGCTTGGACGAATGTGACAAAATTGCCTAATTTATCATCTCTTGAGTTCCTGAACATGAGTAATTGT ACTATCGACTCTATACTTCAAGATGGCAAATCTCCGTTGGCAAAGCTTATTCTCTCTGGGACTACATTCCTGAATGAAGC TGAAGCCTTATTACATATAAATACAAATTTTCTGTCCTATCTGGATGTAGCCCACTCTGGCCTTCACAGATTCTTCTTCT TAAGTAAAATGAAAGTAATAGAACATCTTAATCTCAGCTCGTGTATGAGCGATGATTCAGTTGAGATGGTCGCATGCATT GGTGGAAACTTGAAAAGTCTGAATCTGAGTTGTACTGCAGTCAGCTCTGCTGGACTAGGGGTTTTAGCTGGACATGTGCC CAATCTTGAAATTCTGTCTCTCTCTCAGACACCAGTGGATGATACTGCCATCCCATTTATAGGCATGATGCCTTCATTGA AGGTGGTTGACCTGAGCAAGACAAACATTACAGGTTTTTTGCCCCAGGGGGACAGGGACATCTCATTCTCTCTGACGGCT CTACAGGACCTTAAACAATTAGAAAGCTTGAATATGGAAGGCACACCAGTTGGGGGCTCAGCTTTGTACCCTTTATCAAG TTTCCAAGAGCTGAGATGCTTATCTCTTGAAAGTGCTTCACTCGCAGACATCACACTTTTCTATATATCATCAATTCCTA AGTTGACAAATCTTAGTATCTTGGATGCACTATTGACAAATTATGGGCTTGATATGTTTGAGGCTCCTGAAACTCTGAAA TTGCTGGATATCAGAGGTTGTTGGCTCTTAACTAAAGACACTATATTGTCATTCTGCAGAAATTATCCACAAATTGAAGT AAGGCATGAACTTCTTACTCTGCCTCCTTTCGAGGAAAATGCACTTCATTATTCCTCTCCATCTCAATCAACTTCAAGGA CTCAGCAATCTGCCAAGAAGAAAGAGCATTCCTCTCCGTCTCAATTAACTTCAAGGACTATGCAAGCATCTAAGACGAAA GAGGGAATATCCATATCTCCGTGTTTTATAGATCAAAGGTTGAAGTATAGCAGAGATGAGTTACTCGCATTGCAATTTTC ATCTTTACCTTTTGCATCCAGTAGTGAGAGTGACAATTCAATTTTTGAGAAGCAATTGGATTGA
Protein sequence (LotjaGi4g1v0434900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMNSESGLIKLCIDAACDSKESIDRWRLQKRSLDRLPSPLADALIRRLLSRTLLRPSLLQVFKRSAEEVDLRGENHVDAQ WMAYLGAFRYLRYLNVADCHRITNSALWPLTGMTSLKELDLSRCSKVDDGAIDHILSIPNLEKLHISETSVTAKGVKLLA SLGNLSHLDLGGLPVDDITLTSLQVLKKLQYIDLWGSEISNEGAVVLNLFPRLTHLNLAWTNVTKLPNLSSLEFLNMSNC TIDSILQDGKSPLAKLILSGTTFLNEAEALLHINTNFLSYLDVAHSGLHRFFFLSKMKVIEHLNLSSCMSDDSVEMVACI GGNLKSLNLSCTAVSSAGLGVLAGHVPNLEILSLSQTPVDDTAIPFIGMMPSLKVVDLSKTNITGFLPQGDRDISFSLTA LQDLKQLESLNMEGTPVGGSALYPLSSFQELRCLSLESASLADITLFYISSIPKLTNLSILDALLTNYGLDMFEAPETLK LLDIRGCWLLTKDTILSFCRNYPQIEVRHELLTLPPFEENALHYSSPSQSTSRTQQSAKKKEHSSPSQLTSRTMQASKTK EGISISPCFIDQRLKYSRDELLALQFSSLPFASSSESDNSIFEKQLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 554 | 550 | 9.9E-103 | – | |
| PANTHER | 5 | 554 | 550 | 9.9E-103 | – | |
| Gene3D | 54 | 150 | 97 | 6.7E-16 | ||
| SMART | 88 | 113 | 26 | 14.0 | ||
| SUPERFAMILY | 109 | 504 | 396 | 7.06E-38 | – | |
| SMART | 114 | 138 | 25 | 18.0 | ||
| Gene3D | 152 | 253 | 102 | 6.1E-13 | ||
| SMART | 162 | 186 | 25 | 85.0 | ||
| ProSiteProfiles | 164 | 184 | 21 | 4.801 | ||
| ProSiteProfiles | 212 | 233 | 22 | 7.242 | ||
| Gene3D | 254 | 388 | 135 | 5.5E-15 | ||
| SMART | 321 | 345 | 25 | 490.0 | ||
| ProSiteProfiles | 323 | 343 | 21 | 4.647 | ||
| Gene3D | 389 | 511 | 123 | 2.0E-11 | ||
| SMART | 476 | 501 | 26 | 300.0 | ||
| MobiDBLite | 523 | 560 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0434900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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