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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0436500 |
| Transcript ID | LotjaGi4g1v0436500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B, putative; TAIR: AT1G64480.1 calcineurin B-like protein 8; Swiss-Prot: sp|Q3HRP0|CNBL7_ORYSJ Calcineurin B-like protein 7; TrEMBL-Plants: tr|I3RZB4|I3RZB4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0436500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80952046..80956141) extracted from Lotus japonicus Gifu genome v1.2.
ATTGTATTGAAAATTTTGTTTCCTTAGAGCAGCTATCTAGGAACATAAAATATTGTCACAAATAAAAGGACATAAAATAC ATGAATCCAAGACTGTCTGAATCCAATGTACATTCAATGAATAATGATGACACATTGAAGCTGAACAATTCTCTGTGAAT AGATCTGCACCTTTGAAGGAAACACTACCATCTTCTTCTGGTTTCTGTAAGTAGCTTTTAGTTTTACACCCATGTTTTAT TAACTAACAATAACATGTTTACCCAATTTATTCTTCAAATCTGAAAACAGTTATAACTAATACCGGTTTCATCTTATAAT CTTAATCTTCCCTTATCATATCAAAGTTTCAATTTTATGAGACTATGAGTTGACTTTTCCCCCTGCTATTTTACCATTCA ATCTTCAATCCTCTGCATTCATATATAGCATTCTTCTACGGGATTCTAGTTACTCATTGCTTTTTGTATCATTACTTTGT GACAAATAGTCAAAAACTGCCAAATTTTCCTTTTCTTTTTCTTTTCACTTTCTGAATTTGGTATAAAAAAATTACCTAAC CACTGTTTCATAGTATTGTTTATTTTAGGTTGTAGTCTTTACCACGTCCATTTCAATGAATTGGTTTTGCTTCAGACCAA AGACTAAACCAGAAAAATCCGCTCTTCTTGCTCTGGAGACAACTTGTAAGTGTAGATAAGTCAACATCTATGATCTACCT TATTGGTTATTTTGAACTGGTTTTAAATCTGACTTCGTAGTGTTTGATGATATGCACCATTGACTTTCTTGTCATCATTA ATCATGCTATTGCCTGAATGTTTTGTAGTTTTTGGCACACCACATGTGATTTGTAGGAACTGGAAATTTCATAATCAGCC CGGGCCAAATGTTAGAAGCTATAAGACTTGTCACTTATAACCAAAAGTGACTCCAGAGGATTTTATGGTGAAACCAAACA TGTTGTACATTTATTTCCCTGGGGGCTCGCCGGCTCGGGCTAGATCGGGCTTCCAGTTCTATCTTCCACCAGCTTCTATG CTGTGTTCCTCAATATTATCCTGATCTCTTTGGGATATTAGCCCATCATGTCAATCAAAGTGGCTCAACTATCCAAGATT TATCCTGCCTAACTAGCCACTCTATGCTAAAGTGGTCTTTGTTGTTAGTTACAGTGCTGTTAGCATCGCAGCCACCTTGT TACCTCATGCTTTAAGCATAGGATTTCATATTAGTGCATGTTTGGTTTCATGATTTGCAAAGAATCCATGACATGTTTAT TCAAAAGCTAAGATTTGTAGTTTCTTAGAGCAATCCACTGTGGAACCAAACATGCTATTAGATGTTAGTCTTTAGTTTTC TTGTCTTTTCAAATTGCCACTCGTTCAATCTCAACCATAGAACTCCACTCAGATGTGTTCTGCACTCAGCACTCCCTAGT CATGCTTGAAATTTTCTGATTAGAACACTATGGATACATGTGAGATTTCGTGTGGTTTTAATTTAACTCTGAAATGTCCT TTACCATTTTACAGTTACTGTGAATGAGGTTGAAGCTCTATTTCGCTTGTTTAAGAAGCTAAGCAGTTCAATTGTCGATG ATGGCTTAATTCACAAGGTATTTCCATATAAGTTAGTCGTAGTACTACAGGTCCCATATTTTTTTTCCTTATTAAATGAA TTGATCTTACCTTTTTTCACATTTCCATGAGTTTTTATATAACTGAATGTCATCACAGTTTAGTAGCCTTTTGATAAAAC ATAAATTGTAAGTGCTGAATTCTTCAATATTTTTGTATGCAGGAGGAGTTCCAACTTGCTCTTTTCAGAAATGGTTGCAA GCATAATCTATTTGCAAGCAGGGTGCGTAATCAAGTACTAAAGTTTATTTATTTTTCTCTGGTAATCAGCTGATGAACAC TTATCTAATGATGGATAAAATGATCAACAAGTTTCTGTAATGATCAATAAAACTCTGAAAAGTTAATTTATTCATCAAAG TTGCATAGTATATGATAAAACATGTTATGATATTTATTGTGGACTTCTAATAAATTTTGTGTTAATATCTTCTTTCACTA TGCATGATGATATTGCAGGTATTTGATATGTTTGATATTAAGTGTAATGGAGTAATTGACTTTGGAGAATTTGTTCGCTC ACTGAGCGTCTTTCATCCAAACACACCTGAAGAGAAGAAAATTGAATGTATGAAATTATTTGTGTGTACGAGAAAAATTA AATGTTCTTAATTTTATTTCTGTGATTTTTTGGCTGCTCTGCCCCCTATATTCTACCTATCACTTGATGAGGACTTGCCA ATTTTTTCTTACAGTTGCATTTAAATTGTTTGACCTTCGGCAGACTGGATACATAGAGTATAGTGAAGTGAGTACCCTCT TCCACTATCCTTCATTTTCTTAATATATAATTCGTGGACAAATGCACAGCGTAAACACTCGACAAACATTCAGAGTGAAA AAGGAAGAGAAGATAGAAAAGTAGTGGTTGTGATGTGATAATAAGAGATATGTAGAGAGAAAAACAAGGTGTCTTTGAGG TGTGTATATTGTTAGAGTGACTAAGTATACATTTCTCTTTAGGATTGTTGGAAATGTAGCTTTCACTTAGAGTCACTCAC AATCATTTTCATGTGAATGCTTCCTAGTATGCATCTTAGTAGTTATAACTTCTAGCTAGAGTTACCTTATGCATTTTGAG AAAATTGAATCTGGATTTTATTACTAGATCTCGAGATTTCTTAATGGTGGCGAGCTACAACAACCGCACCAATTAATATC ATGTTTGTTTCATGGTGACATGCTCTAGAATCAATTCTGGTTAGCTACAGGTCTTTACTTCTGAGTTAACTGGTATTGGC TTATGTACAAATCATGAAACCAAATGCTATAAACAAGCTTTAGAATTACTGAAATGGGTTCATATGGAAGAAAAACATCT TTTGATAAATGAATTCCAATTCATTAACCCGCACTTTTCAATCCTTTTTATGTATCTTATGATCCTTTTGGTGTGTAATG GTACACTTGAAGTTAAAGGAGATGGTCTTGGCTATTTTGACTGAGTCAGATGTTACAGTTCCAGATGATGATGTTGAATC CATTGTGGAGAAGGTACTTCACCATGCCACCATACACATGTCCTCCTTCAATTTCTCTATTGTCTCAATCTAATTCATAT TTCTTACTTTCTTGGCTGAATGTTTACCAGTCAATGAAGGAGGTCGACACAAAAGGAGATGGGAAGATTGATGAGGAAGA GTGGAAATTGTATGCAACAAAAAATCCTTCTCTTTTGAAGATCATGACCCTACCATATCTAAAGTAGGTCTCGACTCTAG TCAATGAAACTTTCACTTGCCTATACTAGATCATCTCACAAAGAGACTTTACTTTCCATTATTTTGTCCCAGTCTACTTA CAAAATCAAACTCCAATGATTCTATTTGACAGGGATATAACCATGGCCTTTCCCAGCTTTGTTTTGCACACCGAGGTGGA AGACTAGCGACAAGTACTTGGAGATCGAGGCACCTCAAAGATTGCAGCTATAGATCTGATAGAGTTACTACCTTAATACC TTGTACAATGTGTTGAAAGAACCATTAACCACTGTAGTGCTCCCTGCGGCAATTATAAATATAGGTTGCCTGCCTAACTT CAATGAATAAACTTACTGTGTGCCATGTACTGAACTTAGTTTAGCTTCAGTAATTGTTTATCTAATGTCATCTTAAAGGA TATAGATACACCGATGGATGATTTTGTGCATGTTTGGAAATCTTTCGACAATTGATTCAATAGGCTAGAATCAATTCTAA GGAGAAGCTTATGTGAGTAGTTTTTTGGTGTCAGAACTGATTCTGATAAAAGAGAAACTAATCCAAACATGCTAAAAAAA CTGCATAAATAATGGAAAAATATGTTTGGAAGTTGGTGCTGAAATGGAAAGATACGTAACAAGAATTCTCTGAGTATCAA TTTCTTCACTAAAAGTTAAGCTTCATGTGCAACGTTTGAAAGTGTATTCCTATATTTCACAAGAGTAGTCAAATCTGAAA TCCTGCTTAAAGAACT
CDS sequence (LotjaGi4g1v0436500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTGGTTTTGCTTCAGACCAAAGACTAAACCAGAAAAATCCGCTCTTCTTGCTCTGGAGACAACTTTTACTGTGAA TGAGGTTGAAGCTCTATTTCGCTTGTTTAAGAAGCTAAGCAGTTCAATTGTCGATGATGGCTTAATTCACAAGGAGGAGT TCCAACTTGCTCTTTTCAGAAATGGTTGCAAGCATAATCTATTTGCAAGCAGGGTATTTGATATGTTTGATATTAAGTGT AATGGAGTAATTGACTTTGGAGAATTTGTTCGCTCACTGAGCGTCTTTCATCCAAACACACCTGAAGAGAAGAAAATTGA ATTTGCATTTAAATTGTTTGACCTTCGGCAGACTGGATACATAGAGTATAGTGAATTAAAGGAGATGGTCTTGGCTATTT TGACTGAGTCAGATGTTACAGTTCCAGATGATGATGTTGAATCCATTGTGGAGAAGTCAATGAAGGAGGTCGACACAAAA GGAGATGGGAAGATTGATGAGGAAGAGTGGAAATTGTATGCAACAAAAAATCCTTCTCTTTTGAAGATCATGACCCTACC ATATCTAAAGGATATAACCATGGCCTTTCCCAGCTTTGTTTTGCACACCGAGGTGGAAGACTAG
Protein sequence (LotjaGi4g1v0436500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNWFCFRPKTKPEKSALLALETTFTVNEVEALFRLFKKLSSSIVDDGLIHKEEFQLALFRNGCKHNLFASRVFDMFDIKC NGVIDFGEFVRSLSVFHPNTPEEKKIEFAFKLFDLRQTGYIEYSELKEMVLAILTESDVTVPDDDVESIVEKSMKEVDTK GDGKIDEEEWKLYATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PRINTS | 10 | 24 | 15 | 5.5E-10 | – | |
| PANTHER | 11 | 207 | 197 | 6.7E-98 | – | |
| PANTHER | 11 | 207 | 197 | 6.7E-98 | – | |
| Gene3D | 15 | 207 | 193 | 1.1E-61 | – | |
| SUPERFAMILY | 18 | 200 | 183 | 2.56E-43 | ||
| Pfam | 46 | 91 | 46 | 0.026 | – | |
| ProSiteProfiles | 64 | 99 | 36 | 10.357 | ||
| SMART | 68 | 96 | 29 | 13.0 | ||
| PRINTS | 72 | 93 | 22 | 5.5E-10 | – | |
| ProSiteProfiles | 101 | 136 | 36 | 12.477 | ||
| Pfam | 103 | 169 | 67 | 7.6E-11 | ||
| SMART | 105 | 133 | 29 | 1.3 | ||
| CDD | 105 | 170 | 66 | 2.95109E-9 | ||
| PRINTS | 119 | 137 | 19 | 5.5E-10 | – | |
| ProSiteProfiles | 145 | 180 | 36 | 11.333 | ||
| SMART | 149 | 177 | 29 | 2.4 | ||
| PRINTS | 165 | 185 | 21 | 5.5E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi4g1v0436500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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