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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0437900 |
| Transcript ID | LotjaGi4g1v0437900.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT5G42020.2 Heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q03684|BIP4_TOBAC Luminal-binding protein 4; TrEMBL-Plants: tr|F4K007|F4K007_ARATH Luminal-binding protein 2; Found in the gene: LotjaGi4g1v0437900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81105471..81108254) extracted from Lotus japonicus Gifu genome v1.2.
GCTGGAGATTCATTAATAGTGATTAGTTATCTTGTTGGTGATATCATTGCTTTCCTGGTTTGCTAATCACTGTAGAAATT TGAATAAATTACATCATTAAGTCCGTAGAAAATTGAATAATTAAGATTAGCATAAAGTAAATCAACATTATGCTAATTAT ATTGATGGATTTCATATCATTATCGCAGGGCTAATTTAATGTCCTTATTGTGATGATGTGACTAACGTTTAGAAATTTCG GCACAGGATGTTTATTTGCGATCTCCATTGCGAAAGAGGAACCGAGCAAGTTGGGGACAGTTATTGGAATAGATTTGGGA ACAACGTACTCTTGTGTTGGTGTTTACAGGAATGGCCATGTTGAGATCATAGCCAACGATCAAGGTAACCGTATCACCCC ATCATGGGTTGCTTTCAACGACGGTGAGAGACTCATTGGGGAGGCGGCGAAGAATCAGTTTGCTGTGAACCCTGAGAGGA CCATCTTCGATGTCAAGAGACTTATCGGAAGAAAGTGAGGCATCTTCCAAGTTATTGATTTATGTCAAATTGACTTCATG TGTATGATAAATGTGACTAACTGGTGTCATTTTTGCAGGTTTGAAGATAAGGAGGTACAGAGGGACATGAAGCTTGTTCC ATATAAGATTGTCAACAAGGATGGAAAACCTTACATCCAGGTGAAAATCAAGGATGGTGAGACAAAGGTGTTCAGTCCTG AGGAAGTTAGCGCCATGATTTTGACCAAGATGAAGGAAACTGCTGAGGCATTCCTCGGGAAGAAAATTAATGATGCTGTG GTCACTGTCCCTGGTAAGTGTAGCTAATTTGCAACTAGTTTTCTTTATGATTTTGTTATTATTCTAGGTTCTCACTATTT CTATTGAAATGTGCAGCATACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGTCTTAATGT TGCTAGAATTATCAATGAACCCACTGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGCGAGAAGAACATCCTTG TTTTTGATCTTGGAGGTGGTACTTTTGATGTCAGTATCTTGACCATTGATAATGGTGTTTTTGAGGTTCTTGCTACAAAT GGAGATACTCATCTTGGAGGTGAATACTTGTTTTTCCCATTCTTGATTACAACAGGATACCATGATTAAATTATATAATG GGAAAATAATGTTTGTTATTTCTCTTTCTCTTGACCAGGTGAGGACTTTGATCAGAGAATTATGGAGTACTTCATTAAAT TGATCAAGAAGAAGCATGGAAAGGACATTAGCAAGGACAACAGAGCACTTGGCAAGCTGAGGAGAGAGGCTGAACGTGCC AAGAGAGCTCTCAGTAGCCAGCACCAGATCCGTGTGGAAATTGAATCACTTTTTGATGGTGTTGATTTGTCTGAGCCACT TACCCGTGCTCGTTTTGAGGAGTTGAACAATGACTTGTTCAGGAAGACCATGGGGCCAGTGAAGAAGGCAATGGACGATG CTGGATTACAGAAGAACCAAATTGATGAGATTGTTCTTGTTGGTGGAAGTACAAGAATTCCAAAGGTACAACAGCTCTTG AAGGACTACTTCGAAGGAAAGGAGCCAAACAAGGGTGTCAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGG AAGCATTCTGAGCGGAGAGGGCGGTGAAGAAACCAAAGGTATAATAGTCTACACTCTAGCTTTTTTTACTATGGCCAGAT GTTATATGTTATTGATGCAAATAGGTTTCCAAATTTCACACCTTCTCATTATTATGTTAAACCTTTGAATTCCAGATATC CTTCTCTTGGATGTGGCTCCCCTTACCCTTGGAATTGAAACTGTTGGTGGGGTGATGACAAAGTTGATTCCTAGAAACAC TGTTATCCCAACCAAGAAGTCTCAGGTTTTCACTACCTACCAGGATCAACAGACCACAGTCTCCATTCAGGTACTGTACC ATTGTTCGATTGCACTATGGTGCATGAATGATGCTCACACTTTTTTCCCATCTAAATTCAATATGTAATGGACTTTAATT GTGATGCTTCTTTTAATACATAGGTGTTCGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTGCTTGGGAAATTTGAT CTTTCTGGCATTCCACCAGCTCCAAGGTTTGTTTCCTACTTTCATAGTCTGCACTCTAAATTATACTCTATAATTGTTTG TACTCATTGGCATTTTGTTTGGCAATTGAACAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTGGATGCCAATGGTA TCCTAAATGTCAAGGCAGAGGACAAGGGCACTGGTAAATCAGAAAAGATCACCATTACTAATGAGAAGGGACGCTTGAGC CAGGAGGAAATTGACCGGATGGTTCGTGAAGCAGAGGAGTTTGCAGAGGAAGACAAGAAGGTCAAGGAGAGAATTGATGC TCGCAATGGTTTGGAAACCTACATCTACAACATGAAGAACCAGGTCAGCGAGAAGGACAAGCTTGCCGACAAGTTGGAGT CAGATGAAAAGGAGAAAATTGAGACCGCCGTGAAGGAAGCATTGGAATGGCTGGATGACAACCAGTCCGCAGAGAAGGAA GAATATGAAGAGAAGCTTAAAGAAGTGGAGGCTGTTTGCAACCCAATTATCACCGCTGTGTATCAGAGATCCGGTGGCGC CCCAGGCGGCGAAGGTGCATCAGGGGAAGGAGAGGATGAGGATGACTCTCACGATGAGCTCTAG
CDS sequence (LotjaGi4g1v0437900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTTGTTCCATATAAGATTGTCAACAAGGATGGAAAACCTTACATCCAGGTGAAAATCAAGGATGGTGAGACAAA GGTGTTCAGTCCTGAGGAAGTTAGCGCCATGATTTTGACCAAGATGAAGGAAACTGCTGAGGCATTCCTCGGGAAGAAAA TTAATGATGCTGTGGTCACTGTCCCTGCATACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCT GGTCTTAATGTTGCTAGAATTATCAATGAACCCACTGCTGCTGCCATTGCTTATGGATTGGACAAGAAAGGTGGCGAGAA GAACATCCTTGTTTTTGATCTTGGAGGTGGTACTTTTGATGTCAGTATCTTGACCATTGATAATGGTGTTTTTGAGGTTC TTGCTACAAATGGAGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAATTATGGAGTACTTCATTAAATTGATCAAG AAGAAGCATGGAAAGGACATTAGCAAGGACAACAGAGCACTTGGCAAGCTGAGGAGAGAGGCTGAACGTGCCAAGAGAGC TCTCAGTAGCCAGCACCAGATCCGTGTGGAAATTGAATCACTTTTTGATGGTGTTGATTTGTCTGAGCCACTTACCCGTG CTCGTTTTGAGGAGTTGAACAATGACTTGTTCAGGAAGACCATGGGGCCAGTGAAGAAGGCAATGGACGATGCTGGATTA CAGAAGAACCAAATTGATGAGATTGTTCTTGTTGGTGGAAGTACAAGAATTCCAAAGGTACAACAGCTCTTGAAGGACTA CTTCGAAGGAAAGGAGCCAAACAAGGGTGTCAACCCTGATGAAGCAGTTGCCTATGGTGCTGCAGTGCAAGGAAGCATTC TGAGCGGAGAGGGCGGTGAAGAAACCAAAGATATCCTTCTCTTGGATGTGGCTCCCCTTACCCTTGGAATTGAAACTGTT GGTGGGGTGATGACAAAGTTGATTCCTAGAAACACTGTTATCCCAACCAAGAAGTCTCAGGTTTTCACTACCTACCAGGA TCAACAGACCACAGTCTCCATTCAGGTGTTCGAAGGTGAGAGGAGTCTCACAAAGGATTGCCGTCTGCTTGGGAAATTTG ATCTTTCTGGCATTCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAAGAATTGATGCTCGCAATGGT TTGGAAACCTACATCTACAACATGAAGAACCAGGTCAGCGAGAAGGACAAGCTTGCCGACAAGTTGGAGTCAGATGAAAA GGAGAAAATTGAGACCGCCGTGAAGGAAGCATTGGAATGGCTGGATGACAACCAGTCCGCAGAGAAGGAAGAATATGAAG AGAAGCTTAAAGAAGTGGAGGCTGTTTGCAACCCAATTATCACCGCTGTGTATCAGAGATCCGGTGGCGCCCCAGGCGGC GAAGGTGCATCAGGGGAAGGAGAGGATGAGGATGACTCTCACGATGAGCTCTAG
Protein sequence (LotjaGi4g1v0437900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIA GLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIK KKHGKDISKDNRALGKLRREAERAKRALSSQHQIRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGL QKNQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETV GGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFERIDARNG LETYIYNMKNQVSEKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEEYEEKLKEVEAVCNPIITAVYQRSGGAPGG EGASGEGEDEDDSHDEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 393 | 393 | 0.0 | ||
| Pfam | 1 | 393 | 393 | 9.8E-185 | ||
| PANTHER | 1 | 393 | 393 | 0.0 | – | |
| SUPERFAMILY | 2 | 102 | 101 | 1.1E-33 | ||
| Gene3D | 2 | 291 | 290 | 1.5E-135 | – | |
| PRINTS | 57 | 77 | 21 | 7.1E-55 | – | |
| Gene3D | 99 | 277 | 179 | 1.5E-135 | – | |
| SUPERFAMILY | 105 | 296 | 192 | 1.67E-67 | ||
| ProSitePatterns | 111 | 124 | 14 | - | ||
| PRINTS | 117 | 127 | 11 | 7.1E-55 | – | |
| Gene3D | 143 | 226 | 84 | 1.5E-135 | – | |
| Coils | 167 | 187 | 21 | - | – | |
| PRINTS | 245 | 261 | 17 | 7.1E-55 | – | |
| ProSitePatterns | 248 | 262 | 15 | - | ||
| PRINTS | 277 | 297 | 21 | 7.1E-55 | – | |
| Gene3D | 293 | 474 | 182 | 5.5E-51 | ||
| SUPERFAMILY | 300 | 443 | 144 | 6.54E-43 | ||
| PRINTS | 304 | 323 | 20 | 7.1E-55 | – | |
| PANTHER | 393 | 480 | 88 | 0.0 | – | |
| PANTHER | 393 | 480 | 88 | 0.0 | ||
| Coils | 408 | 428 | 21 | - | – | |
| Coils | 430 | 462 | 33 | - | – | |
| MobiDBLite | 471 | 497 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0437900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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