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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0442200 |
| Transcript ID | LotjaGi4g1v0442200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | histone-lysine N-methyltransferase; TAIR: AT4G26240.1 histone-lysine N-methyltransferase; Swiss-Prot: sp|A4FNF1|HUTU_SACEN Urocanate hydratase; TrEMBL-Plants: tr|I3SC33|I3SC33_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0442200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81581011..81584376) extracted from Lotus japonicus Gifu genome v1.2.
AATTAACTTGTACTCTTGTAGTAACACTTAGCACAATTAATTTGTATCGAGCTTTATTTTGGACCCTTATAAATTTGTTT TCCTCTCTTTCACTAATAATGTGTCTTCAATTTTAGAGTGTTTCCTATGAAGACTAGTTTAAAAACAATTTATCAATTTG GGGTGTTTTTGGAAAAGAGAAGCTGATTGTTTGCGACGGAAAACAAATCCGTCCCAAAATTCTTGTATATCCGTCACGAT AAAAAGAGAACAGTTCAACAAGATTTTCCCAGAAACGTTTTGAAATTGGCGAAGTGAAGAAAAATGAAGAAGCTGGCTAG AAAGTTTCGGAATTCAAAAGATGACCACTACTCTCTTCCTGTTCACGACGAAGACTCTCGTCCCTTGGATCCTCAAGGTC CGAACCCCATTTTCACAATTCCTTGTTCTTCTCTTTATGATCCAAAATTTTCCCACTTTGATCTTAACCAATGATATGAT ACCCCAACTGTTTTTTGTTGTAGAAAATTTAGAAATGTTTCATTTTTTTCTTAAATTTTGATTTGGGTCATGTTATAATC TAGTTAATGATGATTTTGTATTTTGATGTACAGAGCAAGAAGAGTTCGTTCGTTCTTTAGAAAGGAGTCAAATTCAGCAG AGTCGCGTATGGAGGGTACGTATACAATGGCATGCTTCCTTTTTAACTAGATTGAAATTCATGATATGTTGGACTCAGGC TCAACTGATTTTTTTTTTACTGTTATATAGAGGGTGTTTGCTGCTCTATTCTTCTGTTACATCCTGTTTCATTTGTACTC CATGTTCAACCAGGCTTCATCACCTTGGGAACTGGTATGTTTCTATGGCTTTAGCTATATATTATGCAGTATGCACACAA GTATGCCAAGTAGTGTTTCAGTGTCAGCTAGAATTACAAATGTTCTGTTTATATTAAAGGGGTTTTTTTCTTATGACACA TGGTCTTTCAAGGTTGCATGTGATTTGAAAACAGTAGCTTTTTCATTTTTTTAATGAGATGTTTGCTTCAGGAATCAGGA TGTTGTTGAATATCTGATGTCTTTGTGCAATTATTCTATTTTATTACTATTAGAAAGTGGGTCTTATGAGATAAGATAAG TAGTCTTGTTCCTGTTGTAACAAGAAAACCTCTTATCACAATAGAGTAATATTAGTTTTCTGTGTATGGTTGAGAAGAAA ATAATGTTTTAGGCAGTGCATCTGCTACCTGTTCTGCTTGAAGTCGATTATGTATAAATGTGACTTATATGGAAACAATG TACTCTTTCTCTTTTTTCCCCAAATTTATAACATTTAAAATAGTATTTTTAGCATTTTCTGAGTTTCATTACTGTTCCTC TAACTGAATATGTTGTTGCCTTTCTTTGTTCTTTTGATAAATAGCGGTACCATGCTTACTTTATGGAGGAGACCTACTCT TGGATGATTATATCTGCAGGTTCACTTCTCTTTTTAGTCAGGAATCATATCATATTCATATACATCCACTTCAGCTTCCT ATTTTATACCACGACCTTTTTCCATTGTATTTAGTTTAGACCATTTGCCTGCCTTCCTTGTATTCTTGTACCAATTTACA TGAGGTTGAAATATGATATGCTGTTGTTATCCACTTATTGAATTATGAGGACTAGCACTGTAAATTTTGTTAATTGAATA ACTTCTACAGATATGGTGGCTGTTTTGGCATGCTCATTTGCCATCATAGGACTGCTTGATGAGTCAATGCATCACAGAAG ATGGATCCATTACTCATTTTTCACTGGCGTTGTTCTTGCAGTTTTCTGGTTATATTACATGTTGAGGTAAAGTTCTTAAA TAAGCACCAACTGATGCATTTTATATGATCCATATCAGATTTAATAAATAGGTAAACTAGTTATCATATATAAATGTGAA ATCAAATATATAACAAAACTCTAGGCAGCCATATTTGGTATATGCTTGGATTTCGTAGCTACATGAATCATGAGGCTCTC CAGTTGGCTCCAAACAAATCAAGAAAAGGATAGAAGGAGAATGTACATATTCTACTTCAGGAATATTGGGATGGTGCAGA AAGTTTATTTGATTCCCTTCTCGGTCTTCTGAATTTTAAAACTATTTTTTAGAAATAACTTTTGAAATATGTTTTCCAAA AGAAGAAAATAAATAAATTGTTTGAACGAGATGTTTTACAAAGTTGAAAAATCTGTGACTTTAAAACTGATAATGCAAAC ATTGATGTTTCAGGATTTAGTTTTTAAAACTGAACTAATAAACTATGTTTTCAATCACAGTTTTTTAAAACAGTCCATAT CAAACGATTTGTTCTCTTTTTCTGTGTTTACAAATTAAAAACAATTTTAAGAAAAATAATCAAACAGACCCTTAATGTTT GCTATACTGGAGTGCTTCTTGCAAACTCTTCAGTTGTGTTTTCTGCTATTTGTATCGCCTATTTCAAGGTGCTTCTTGTC TTTTAGTATGTGATGATAAAACGTGTTTTTGATAGGTTGCCAAAGCTCCGCTGGGATGTTATCTGGTTGCCATTTGGTCC TCTTTGGTAAGCCATGATTCCCATCTATTTGTGTTTGTTGTGTAAGCATTAACTAACAGTCTGTTTGGATTCTTGGGTAA ACCTCCTAAAATCATCCCTCATTTTTCAAAAGGCTACTTAGTACTTACTCCTTTAGCTTCTACCAAAATTACTTTTCCAA TGTGGAAACTTGTGGAGTTCAAAACACACTAAATAACTGCATTGCTTGATTATTATGCTGCAGCGCCTCTGCACTCTGCC TCTATGTGGATCATTTACTAGCGGAGTCATCAGAAGACGTAAGAAAGCTTCGCGGGTACATGTATACCTACAAAGCAAGC TAGAGCTGATGTTCTGACCCGGTGATTGAGCAAGGAGCATGAGAAGCATTTTGGAGCAACATGACTACAAAAACTGAAAA GTATTTTCTGGATAGAAGCAATTAAAGAAGATAGGAACTGTCACCAGATCAGAGATCAGGTGATATGGGTTAAGGTGGCA TGTGTAAGAAAGGGCATTGAGCGAGTAACAATCAAGGGTGTTTTTGGCAAAAAAACATTATTAATGCGATAGAATTCAAG TTGGTTCTTATAAAAATGATGTAGTCACACCTTGAATTCGGTTCTTGTAAAAAGGATAGAGGTAGTAATAATTTTTTATT TTTAAACACTTTAAGAGTACCTTCACCTTGTACAATTGGAAGTTTGATTTTCTCGATCTATGTCTACTACTTTAATATTT TCTTCATAAATTTTGCCCTAAAAAATATATTTGTCCTTTAATGCCAATTTGGTTAACGATTAGGAGCATACGATAGGATA ATTCAT
CDS sequence (LotjaGi4g1v0442200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGCTGGCTAGAAAGTTTCGGAATTCAAAAGATGACCACTACTCTCTTCCTGTTCACGACGAAGACTCTCGTCC CTTGGATCCTCAAGAGCAAGAAGAGTTCGTTCGTTCTTTAGAAAGGAGTCAAATTCAGCAGAGTCGCGTATGGAGGAGGG TGTTTGCTGCTCTATTCTTCTGTTACATCCTGTTTCATTTGTACTCCATGTTCAACCAGGCTTCATCACCTTGGGAACTG CGGTACCATGCTTACTTTATGGAGGAGACCTACTCTTGGATGATTATATCTGCAGATATGGTGGCTGTTTTGGCATGCTC ATTTGCCATCATAGGACTGCTTGATGAGTCAATGCATCACAGAAGATGGATCCATTACTCATTTTTCACTGGCGTTGTTC TTGCAGTTTTCTGGTTATATTACATGTTGAGGTTGCCAAAGCTCCGCTGGGATGTTATCTGGTTGCCATTTGGTCCTCTT TGCGCCTCTGCACTCTGCCTCTATGTGGATCATTTACTAGCGGAGTCATCAGAAGACGTAAGAAAGCTTCGCGGGTACAT GTATACCTACAAAGCAAGCTAG
Protein sequence (LotjaGi4g1v0442200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKLARKFRNSKDDHYSLPVHDEDSRPLDPQEQEEFVRSLERSQIQQSRVWRRVFAALFFCYILFHLYSMFNQASSPWEL RYHAYFMEETYSWMIISADMVAVLACSFAIIGLLDESMHHRRWIHYSFFTGVVLAVFWLYYMLRLPKLRWDVIWLPFGPL CASALCLYVDHLLAESSEDVRKLRGYMYTYKAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 49 | 49 | - | – | |
| PANTHER | 1 | 192 | 192 | 1.2E-87 | – | |
| MobiDBLite | 7 | 29 | 23 | - | – | |
| CDD | 18 | 158 | 141 | 0.00115776 | – | |
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 50 | 71 | 22 | - | – | |
| Phobius | 72 | 90 | 19 | - | – | |
| Phobius | 91 | 111 | 21 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 112 | 122 | 11 | - | – | |
| TMHMM | 123 | 142 | 20 | - | – | |
| Phobius | 123 | 141 | 19 | - | – | |
| Phobius | 142 | 152 | 11 | - | – | |
| TMHMM | 152 | 174 | 23 | - | – | |
| Phobius | 153 | 174 | 22 | - | – | |
| Phobius | 175 | 193 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0442200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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