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LotjaGi4g1v0443500.2

Overview

Field Value
Gene ID LotjaGi4g1v0443500
Transcript ID LotjaGi4g1v0443500.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description NAC domain protein; TAIR: AT4G29230.2 NAC domain containing protein 75; Swiss-Prot: sp|O49459|NAC73_ARATH NAC domain-containing protein 73; TrEMBL-Plants: tr|A0A151TKC8|A0A151TKC8_CAJCA NAC domain-containing protein 8; Found in the gene: LotjaGi4g1v0443500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81690708..81695947) extracted from Lotus japonicus Gifu genome v1.2.

CAAAAGTTTAAAGGTGCTATGAGAGTTTGAACCAGAAAACTTTTCCTTTATCATTTTTCTCACTTGCTTCAGATAAAGCA GAGTGAATTCTGGTGTTTTTTCCATCTTTCTGTTACACTTCCCTCTTTTCTTCATCCTCCTTCACCTGCTTCTTGCTCCT CTCTTCTTATCCTTCTACAACACTTTATTTTTCTGCATATTCTCATCCTTATTCTGCAGAATTTTCATTACCATAGATTT GATTCATTCTCTAAAACAGCCACATGTATGGTAGAGAATTATTCTCTATTTTCCCCCCTTTTTTATATTTCAAGGGTTTT TTTTTACTCTTTATTTATCATTTATGTTGGTGTCTGTATAGCTAGTTTCTGAATATGATCAGCAACTTGTGAAAGCCAAA ACAAACTTCTTATTATTCTTTTATTTTCTCTTTCAGGTCACTGGCATCACTTTTGTTGTTGGTGTTATAATTCAGGTCAC TGACAATGATTGAAACATATCATCCCATTTTTCCTATTGATCTTTTAGAAAAAAATTAGCTATGATCTCAACAAGCTCTT GGATTCTCCTGTGATATATATATAGAAGAGATATGCACTATTCATTCTTCCAATTCAAAACCTTATCATAAAGTTTGATC AAGAGAGGTAGCATATCCATCACAATCAAGCACTTTCAGAAGCAGAACATGAATAACATGAGCAACTTGAGTTCTTTCAG CAGCTCTGGTCTCATAGATTCCAGGCTTGAAGAGCATCAATTGTGTAGATCTAAACAGTGCCCTAGTTGTGGACACAAGT TTGAAGGGAAGCCGGTACGGAAAAATCTCAGTAATATTCTTTTCTTCAAGAAAAAGCCTTTGACAAAATGAAGAATCATA CCAGTAAACTTTACCATATTCATATTCTCAATGCCGTTTCATAATTGTAATTAATTAAATGGAGCATTTATATGGTATCC CTTTTCTCCTTTAGGCTTTGTCTACCTAGCAATTACTAAAGTTTTAGAATTTGTTGAAGTTTTGATAATCCTCTTTATTT TATATTCCCTCTCTCTTTTCTCTTTCTTATATTCTTCTTATCTTTCTCCCTTTAACTTTTTTTTTTTTCATTTGAATTGC AAATAGGATTGGCTTGGTCTACCAGCAGGAGTTAAGTTTGATCCAACAGACCAAGAACTCATGGAACATCTTGAAGCCAA GGGAAAGGATATGAAATCACACCCTTTGATTGATGAGTTCATTCTCACTATTGAAGGAGAAGATGGGATTTGTTACACCC ATCCTGAAAAAATTCCAGGTTGATCAATATTAAGATATATAGAAAAATTGAAACACCCTCTATAGCTCTAACTTCTTCAA GCTGATCAAGTGTTTGTGGTTTCCTTATTATTATTAAGAACTATACTAAGAGTTAAGAAAACACAAGAATTTGTAGTTAT CACTCACTATGCCATGATTTCTGTTAAGAACAATGTTATATGTTACGAAGGAAAATTGCAGGAAATGTTGGTGTGGCCAA GTTAACTGGTGTAGTTTTACAAAAATCATGGGGGTAGTGAGTAATAACTAACTCTTCCTGTATTTCTTATCGTGACAATT AGTATTTTCCTTTCTGTCAAATACCATAGTTAGCAATGCCCCATCATCAACATATTGCTTGTAGTTTTCTTTCGTAACAT ATAACATTGTTGTATTATTTAACATTTTATATAAAGAACTCCCTTGATATTTATAAGAAACTTAATGAAGAGGGTTCGCC TAATGGTTGATCTAACTTTGATTTTGGTTTTGTGGTTAATTTTCAGGAGTATCAAGAGATGGGTTGAGTAGACACTTCTT CCACAGACCATCAAAGGCATACACAACAGGTACAAGAAAAAGGAGAAAGATTCAAACTGAATGTGATCACTTGCAACAAG GAGGAGAAACCCGTTGGCACAAAACTGGGAAAACAAGACCAGTGATTGTGAATGGAAAACAAAAAGGGTGCAAGAAAATT CTAGTCCTGTATACCAATTTTGGGAAGAACAGAAAACCAGAAAAGACAAACTGGGTGATGCACCAGTACCATCTGGGACA GAATGAAGAAGAGAAAGAAGGGGAACTTGTGGTGTCAAAGATATTTTATCAGACACAGCCAAGGCAGTGTAATTGGTCTG AGAAAAGTGCAGCAACAACAACAACAACAACAAATGGTGAAGGAAGTGGAGACCCTAACTACAGTGGAAGTGGTAGTTGC TCTTCTAAGGAAGTGGTTACTCAAAGAGATGAGATGTCTGCTGCTGTTGTTGGGGTTACTCCAATGACAAGCTTCACCAC TGCTTTGGATATTCAGCACCTAAAATCTGACCATTTAAGCTTCTTCCCATTCAGAAAAAGCTTGCATGAGGTACATAAAT ATAAACCATAAAGTAATGAAACTTGAATATACAAACCCCCAATAAACACCTCATTTTGCTATCTAGTTCTCTTCTTATAT ATATATCATATCAATTACTTCTTTCTTTTTAATAATGATATTTAGACATCCAAACAATATATACACATTTTTTTATTAAA TGCATTACTTCTCTCTTCTATTTTTTCCCCACTGGGGGTTGTTCTCAAGTATGATCTAGCTTCTAGAAAAATTCTTTTGC TTTGGGAAAAAAAACTCTATGCTCAAAATGGTGAAAAAAAACTGAAAGGGGTTAAGGAAGCTGTTGACATAACACCATTG CTTGCATATACCGCATGAAATTTGTGGACCTGGCCTGATATTAAATCAATGTCAGCTAACAATCACTTCTTTATTTCTCT TTGATCTCATTGATCTCATTCCTACATATATTTTCTTCATATCTCATTTTTTAATCAAATTTTATATTATATTATTTATT TCTCTTCATGTATTTTAATTTTATCTCTCCCTTATGGTGTATTTGGAGGTTTCAGCCAAACTTTTTTTCATACCTAAATA AACACAAAATGTTGAAAAAGATTAAGGAGAGGTGAGGTGATAATAATGGACTAGCTAGCTATACCTAGGTAGATATTTAG GTGATATTATATTTGTAGTTTACACTTAATTTTCAGATGATGATCGATGGGTGTTGCAGGTTGGAATAGGAGAAGCTTCG AGGACATCAAGAGAAGTTCAAGCATCAGGCTCATGCGAGGAAGAAGTACATGAACAACGGCATGTAGCACATCATGATCA TCATCAACAACAACAACAACAACAGATTGCAACGACATCGTTCCACATGATCAGTAGGCCTTCGCATCCCATCTCCACAA TCATCTCTCCACCACCTCTCAACCACACATCCATCAATATCCTAGACGACAATTCTTACCAAGTCTCCACAACAACAATG ATGCTCCAAAATGATAATTTTCAGGTAATCATCACCCAAATTAAATCCCACTTCCCAAAGATGCTTATATAGTTTTTACA CATTTTCCCCATGATAAAAACTACTTCACTCATTAATCATGTTTTTATTTGTCATAAAAATAATTTTCAGTTAATTTCTT ACTAACGCAAACAAACACCATTTTTTTTCCTCTAAATTTATTTCAATCACATCACACCATATATAACATTTATATATCAC TTATCTTTTTTCTCTTTCACTCTACAATTTTGGTGCGCATTAAACATTATTAGTTTTCCCAAAGAGAGAATAGAATAATA TTTTATTCACGCTTTAATACACCAAACGAGATAGGAATAAAAAAATAGGAAAATAAGTGATATAATAGGTTATTGATGTG ATATAGTAAGAAAAAATAAGTAGAAATGAAATAAAGGAAAGTTGGTATAGATGAATCACTTCATAAGAAATGGTAGGTTG ACTGGCTGGCTGAGTACGCCACGTCGTGCAATCAATGGGTTATTCGATTGATTGTATTGTTAAGAATCACCCTTAGAATT CGATGGACTTATCACAATTCATGCGGTTCTAAGTACTACTATAAAGAAATAGGCTTGCACCTTTAGCAACCGCTATAGGT TTTGGTCAAGTGGTACTTGATCCAAGACATTAAGTTCAAAATGAAGTGGTTCTGCATGCACGCAGGCAGATACATTGACC GGGCAAGCTTTTGTAAGTGCTTGACATTACAATGTACAAGTTGACTGTCTTTTCGCTTTTTGAGTGACGTTCAAACATGA TCATGATTTAAATGTTGGCTTTGAATTTGATTGTTGTCTTTTTTAATTAAATGCATGTGCAATATCCATCCACATGCAGC AACATGATGATAAACTAGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATTATGGGGTGCACTTCAACTCTTACCAAA CAGGTAACTGACAACTTTTTTGACTCAGAAATATATGAACTTTGTTTCTCATATTGCCGACTAGAGAAAGAGAAAAGAGG GTCAGGAATTAATAATTAATCTAGTTAAAAAAATTCATTTGAATTACAGTAAAGACTAGCTAAAATCCAACTTCATCTAT CTTTTCCTCTTTATTTGTATTTTGGTTATGATATATATTCTATCAACTTTTCGACTCGTTATAAGGAAAAATACTAATTT TTTTTTTGAAGGGAAGGAAAAATACTAATTGAGAAAAGGATATATAGGAGCAATTCCTAAGTGTGCTTCATCTCACAAAG CTAACCCTAATATAATTATGTTTTCATTATATGCATGAATGAATGCCCTCACAGTCACAGGAGTCATCCATGGCAAACCC ACAAGAAGCTGAGTGGTTGAAGTACTCTTCTTACTGGCCACACCCTGACCATCATTGATGCTTGAAGCTTCAATTAAGTC TCTTTCCAACAAAAGGCCAAGTAAATCATCCACGTGCATGGTTTTGCTCTTTTTCTTTCTTTCTTTTCCAATGGCAATAT TGGGGACCTTAAGCTTTGCAACGAAACTAGTTGTTAGAAACAAAAAGATCAAAAGGAACGAAAAGAAACACATGCAACTC TCTCTAAAGACCTGAAGCACATTCATATCCTGGTGCTAGCTGCATGAAAATCATCACTAATGTGATTACATTATCATCCC ATCTTATTATTTTTTTATTTCGACATGTTTGTATAATTCTCACTTTTCCTCTTTTTTACACCACAAATATATTATATATA TGTATACCAATGAGTTTGTAATTGTATAGATGAAATTTTTACATCAAACCTACTAAGATCATGATTTGACAATATTGTAC CAAACGGTGATGTTTTGGTATTTTTATAAATGAAATTTAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0443500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATAACATGAGCAACTTGAGTTCTTTCAGCAGCTCTGGTCTCATAGATTCCAGGCTTGAAGAGCATCAATTGTGTAG ATCTAAACAGTGCCCTAGTTGTGGACACAAGTTTGAAGGGAAGCCGGATTGGCTTGGTCTACCAGCAGGAGTTAAGTTTG ATCCAACAGACCAAGAACTCATGGAACATCTTGAAGCCAAGGGAAAGGATATGAAATCACACCCTTTGATTGATGAGTTC ATTCTCACTATTGAAGGAGAAGATGGGATTTGTTACACCCATCCTGAAAAAATTCCAGGAGTATCAAGAGATGGGTTGAG TAGACACTTCTTCCACAGACCATCAAAGGCATACACAACAGGTACAAGAAAAAGGAGAAAGATTCAAACTGAATGTGATC ACTTGCAACAAGGAGGAGAAACCCGTTGGCACAAAACTGGGAAAACAAGACCAGTGATTGTGAATGGAAAACAAAAAGGG TGCAAGAAAATTCTAGTCCTGTATACCAATTTTGGGAAGAACAGAAAACCAGAAAAGACAAACTGGGTGATGCACCAGTA CCATCTGGGACAGAATGAAGAAGAGAAAGAAGGGGAACTTGTGGTGTCAAAGATATTTTATCAGACACAGCCAAGGCAGT GTAATTGGTCTGAGAAAAGTGCAGCAACAACAACAACAACAACAAATGGTGAAGGAAGTGGAGACCCTAACTACAGTGGA AGTGGTAGTTGCTCTTCTAAGGAAGTGGTTACTCAAAGAGATGAGATGTCTGCTGCTGTTGTTGGGGTTACTCCAATGAC AAGCTTCACCACTGCTTTGGATATTCAGCACCTAAAATCTGACCATTTAAGCTTCTTCCCATTCAGAAAAAGCTTGCATG AGGTTGGAATAGGAGAAGCTTCGAGGACATCAAGAGAAGTTCAAGCATCAGGCTCATGCGAGGAAGAAGTACATGAACAA CGGCATGTAGCACATCATGATCATCATCAACAACAACAACAACAACAGATTGCAACGACATCGTTCCACATGATCAGTAG GCCTTCGCATCCCATCTCCACAATCATCTCTCCACCACCTCTCAACCACACATCCATCAATATCCTAGACGACAATTCTT ACCAAGTCTCCACAACAACAATGATGCTCCAAAATGATAATTTTCAGCAACATGATGATAAACTAGGAGGAAGGTCTGCG TCTGGTTTGGAGGAACTCATTATGGGGTGCACTTCAACTCTTACCAAACAGTCACAGGAGTCATCCATGGCAAACCCACA AGAAGCTGAGTGGTTGAAGTACTCTTCTTACTGGCCACACCCTGACCATCATTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0443500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNNMSNLSSFSSSGLIDSRLEEHQLCRSKQCPSCGHKFEGKPDWLGLPAGVKFDPTDQELMEHLEAKGKDMKSHPLIDEF ILTIEGEDGICYTHPEKIPGVSRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDHLQQGGETRWHKTGKTRPVIVNGKQKG CKKILVLYTNFGKNRKPEKTNWVMHQYHLGQNEEEKEGELVVSKIFYQTQPRQCNWSEKSAATTTTTTNGEGSGDPNYSG SGSCSSKEVVTQRDEMSAAVVGVTPMTSFTTALDIQHLKSDHLSFFPFRKSLHEVGIGEASRTSREVQASGSCEEEVHEQ RHVAHHDHHQQQQQQQIATTSFHMISRPSHPISTIISPPPLNHTSINILDDNSYQVSTTTMMLQNDNFQQHDDKLGGRSA SGLEELIMGCTSTLTKQSQESSMANPQEAEWLKYSSYWPHPDHH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31079
4 421 418 2.1E-173 –
PANTHER
PTHR31079:SF31
4 421 418 2.1E-173 –
SUPERFAMILY
SSF101941
43 208 166 5.49E-37
IPR036093
ProSiteProfiles
PS51005
47 208 162 31.822
IPR003441
Pfam
PF02365
48 189 142 4.5E-23
IPR003441
Gene3D
G3DSA:3.30.310.150
56 213 158 2.8E-24
IPR036093
MobiDBLite
mobidb-lite
216 250 35 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0443500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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