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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0444600 |
| Transcript ID | LotjaGi4g1v0444600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT3G16490.1 IQ-domain 26; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|V7CQ97|V7CQ97_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0444600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81750907..81754396) extracted from Lotus japonicus Gifu genome v1.2.
AGGAAAAGAACAAAATTTATTCATCTAAAAGCTATCTTTTATTGGCTCTGCTTTGATTTTGAAAACACAGCAGAAGAAGA AGGACGCATTATTCGTTTTCTGTTTACTAGTTAAGAACCTGTTTGTTTGGTTTCTGGACTTGGAAGCTGAAGAGAGACTG AGAAAAATAGAATGATACATTACTGGTTCATTCATTCGCTAGAAGCTAAAGAGTAAAATATGGGGGTGGAGTGTGAACCA GTTGCAGAGAAAACAGAGGAAACAGAGGAAAACAGAGGAAGTTGATATGTGATACAGTGAACTGTATAAATTAGGAAACT CTTCACGAGTGTGTCAGACATTTTAGGACACTGAGGTATCTTACTTTTTAAGGACACGTCGCTCAGGGGTACAGATGAAA AAAGAGATTTCACTTTCTTCTCTTCTTTTCATTCTCAGTTCAGTGGAAAATTTTGATGCTTTCACATTCAACTTTTGAAC TGCTTTTTTCCTTTGGAGAATTTGATTCTACCAAGGTGGGTTACCACTTCTCTCTCGTGCTGTGATTATTTTACTACAAA CAAACAAGCCACACTTATCTCTCTCTCGATCTATTATATTTTATATTCATTATTTTAGTGATGTTTGATTTTTCTTACCA TGCTTTCTTCCCTCCCTGCATGTTCCAGAGGCATGTTTTTGTCATGTAATGCAGATTTTCACGAGGCATTTTGATTTTTT GTCTTAAAAACTGTGACTTGGTTTTTGTATGTAGGTTCCACTTCTTCAAACTTGCAGAATTCCAAAGCCTCAATTCACAC AACCAATGGGGAGAGCCACTAGGTGGTTGAAGGGCTTGTTTGGGATAAAGAGAGACAAAGAGAACAAAGAAAATTCAAAT TCAGCCACCAAAGGGTCTCCTCATGTTCACTCAGAGAGAGATTCCAAAGGTTTATGTCATAATCCTACCACCATACCACC CAACATTTCACCAGCAGAGGCTGCTTGGCTGCAATCCTTCTACTCCGAATCTGAGACGGAGCAAAGCAAGCATGCTATTG CGGTCGCTGCAGCCACAGCAGCAGCCGCGGATGCTGCTGTGGCTGCAGCTCAGGCTGCCGCGGCGGTAGTTCGGCTAACC AGCCACGGTAGAGACACCATGTTCGGTGGTGGACATCAAAGGTTGGCTGCTGTCAAGATTCAAACAGTTTTTAGAGGATA CTTAGTAAGTTTAGCTTGCACTTCTCTTAATCATGTCCAACTATAGACACAAATTCTTGGCTTTCAATTTTTATTAGCTT CACTTTATGTCTGGTCTCATGATTTGCAAACAATTCTTACTCACAAGCTAAGATTTATAGCTTCTAACTAAAACTGATTT TAAGCATTTCACTGTGGAACCAAGTTATCAGTTAGATTAGATGTAACATAACTTATTTAGAACTTCATATCAGAAATCTT GATAATACATGCTGCTTCTTTACTGTTTTCTTGAGGAATTGTGGAACATTGAAATTGATTATGGGTTTCTAAACAGGCAA GGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTGCAGGCACTTGTGAGAGGGTACTTGGTGAGGAAGGAAGCAACA GCAACTCTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCCATGGTAAGGTCTCAGAAGTCTCGTGGACTCATGAGCTC AAAGAATGAAGCATACAGGACTCAAACACTAGCAAGAAGATCCATGGTACAATATCTCAGATTCTACACTATCTTGTAGC TTGAATAGTGTTTGCTTTAGTGTCTTTTGGATCGGCGTTGTCACATATTTGATTGTGTTGTCACATATTTGATTGGGGTA AAAGTGAGCTGAAAATGAATTAATTATGTCTAGACTCTAGATACATTTCTGAAAAAAGGGATTTCTGGATGAAGTCCAGT AATACAATCTCATAATTGATTATGTTAACGCAAAAATTACTTTCTCTCTAGCTTCTACCTTCTATCATAATTGACTCTTG GACTGGAGTCAATTCTTCAAGATGACTCACAAGCATTTATATTGTCATCTAAAAGTGATTTTCCCTACTGAGAATTGTTC CTGAGGTCCCTGATGGAACCAAACATACACTTAGTGATGATTTGATGTTGAATATAATCTTTCGCAGGAGAAATTTGATG ACTATAGGAGTGAGCACACAGCTCCAATCCACAGCAGAAGGCTATCATCTTCTTTTGATAACACCAACAACAGTGTTGAT GGGAGCCCCAAAATAGTGGAAGTGGACAATGGTAGTAGGCCAAAATCAAGATCTCGCAGGAGCAACACATCAATTTCAGA TTTTGGCGAAGACCCTTCATTTCACTCTCCTCTCCCATTCACAATTCGCACCCCTGCACCTTCAGATAACAGGAATTTCC ATGACTCATCAGAATGGGGCCTAACAAGGGAAGAGTGCAGGTTTTCCACAGCACAAAGCACTCCACGCTTCACAAGTTCT TGTAGTTGTGGTGGTTCTGTAGCTGCACCTTTGACACCTAAAACTGTTTGCACTGAAAACCTCTTCATTGGGCAATATGG CAACAATTTTCCAAATTACATGGCAAGCACTAAGTCTTTCAAGGCCAAATTGAGATCTCATAGTGCTCCAAAGCAACGCC CGGAACCCGGTCCGAAGAAGAGGCTTTCCCTCACTGATTTGATGGAATCTAGGAGTAGTTTCAGCGGGGTTCGGATGCAG AGGTCTTGCTCACAGATTCAGGAAGCTATTAGTTTTAAGAATGCTGTGATGAGTAAGCTTGAGAAATCCACTGAATTTGG TAGGGAGACAGACAAAACTAGATGGTGATTGGTGAACTTATCGGAAATTCTTCCACAGTTGATTCTGTAAGTAGCTTTTG GGTAACAGAATTTATTTCTGAGAAAAACTAAGCTGATCCAAACATGATATTAGAGGCATTTATGGGAAAGCTAGCATTCT TTTGGTTTTTCAGTTTTCACATTGTTAGTATTAATGGGAATAGCTTTGTCTTTCTGCACCACATGATTGGCAATTTGAAG ACATATGGTGGGTAGGAAACAGGTGAATCAAGACAAAATAGAAGGATAACAATGAGAACTAAGAGGTCCCCATTGTAACT TGCAAAAAGTTTGGTCATGGAATTATCTTCATGTATTGTCATTATAATCAAGTGTAAGAGTAATTCATTTGATTTCTTTT TTATTTTAGGCAACTCTTTCATCTTTTCTCAATTTATTTTAGTTTAGCTTGCATAAAGTAAAAAGCTCCATTCAATTCTA GACTTGCAGTTGCAAGTGATAAAAACAAACACCAAACAAGACCTGTGAAGAGAAAATAAGGAACCAATGGAAACAACTTG TTTGCGGAAAAGAGGAGATAAGGGTCTGAAAATGATGTTAGAACATGTCTCAAACTATAATTCTATCTGTTTTAATATCT GGAAACAACATTCTTCTTTTTCCTTTTTCTTGTGAGGTGCAAATTAAGGC
CDS sequence (LotjaGi4g1v0444600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTCACATTCAACTTTTGAACTGCTTTTTTCCTTTGGAGAATTTGATTCTACCAAGGTTCCACTTCTTCAAACTTG CAGAATTCCAAAGCCTCAATTCACACAACCAATGGGGAGAGCCACTAGGTGGTTGAAGGGCTTGTTTGGGATAAAGAGAG ACAAAGAGAACAAAGAAAATTCAAATTCAGCCACCAAAGGGTCTCCTCATGTTCACTCAGAGAGAGATTCCAAAGGTTTA TGTCATAATCCTACCACCATACCACCCAACATTTCACCAGCAGAGGCTGCTTGGCTGCAATCCTTCTACTCCGAATCTGA GACGGAGCAAAGCAAGCATGCTATTGCGGTCGCTGCAGCCACAGCAGCAGCCGCGGATGCTGCTGTGGCTGCAGCTCAGG CTGCCGCGGCGGTAGTTCGGCTAACCAGCCACGGTAGAGACACCATGTTCGGTGGTGGACATCAAAGGTTGGCTGCTGTC AAGATTCAAACAGTTTTTAGAGGATACTTAGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTGCAGGCACT TGTGAGAGGGTACTTGGTGAGGAAGGAAGCAACAGCAACTCTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCCATGG TAAGGTCTCAGAAGTCTCGTGGACTCATGAGCTCAAAGAATGAAGCATACAGGACTCAAACACTAGCAAGAAGATCCATG GAGAAATTTGATGACTATAGGAGTGAGCACACAGCTCCAATCCACAGCAGAAGGCTATCATCTTCTTTTGATAACACCAA CAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACAATGGTAGTAGGCCAAAATCAAGATCTCGCAGGAGCAACA CATCAATTTCAGATTTTGGCGAAGACCCTTCATTTCACTCTCCTCTCCCATTCACAATTCGCACCCCTGCACCTTCAGAT AACAGGAATTTCCATGACTCATCAGAATGGGGCCTAACAAGGGAAGAGTGCAGGTTTTCCACAGCACAAAGCACTCCACG CTTCACAAGTTCTTGTAGTTGTGGTGGTTCTGTAGCTGCACCTTTGACACCTAAAACTGTTTGCACTGAAAACCTCTTCA TTGGGCAATATGGCAACAATTTTCCAAATTACATGGCAAGCACTAAGTCTTTCAAGGCCAAATTGAGATCTCATAGTGCT CCAAAGCAACGCCCGGAACCCGGTCCGAAGAAGAGGCTTTCCCTCACTGATTTGATGGAATCTAGGAGTAGTTTCAGCGG GGTTCGGATGCAGAGGTCTTGCTCACAGATTCAGGAAGCTATTAGTTTTAAGAATGCTGTGATGAGTAAGCTTGAGAAAT CCACTGAATTTGGTAGGGAGACAGACAAAACTAGATGGTGA
Protein sequence (LotjaGi4g1v0444600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSHSTFELLFSFGEFDSTKVPLLQTCRIPKPQFTQPMGRATRWLKGLFGIKRDKENKENSNSATKGSPHVHSERDSKGL CHNPTTIPPNISPAEAAWLQSFYSESETEQSKHAIAVAAATAAAADAAVAAAQAAAAVVRLTSHGRDTMFGGGHQRLAAV KIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKEATATLHSMQALIRAQAMVRSQKSRGLMSSKNEAYRTQTLARRSM EKFDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSPKIVEVDNGSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAPSD NRNFHDSSEWGLTREECRFSTAQSTPRFTSSCSCGGSVAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKAKLRSHSA PKQRPEPGPKKRLSLTDLMESRSSFSGVRMQRSCSQIQEAISFKNAVMSKLEKSTEFGRETDKTRW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 38 | 437 | 400 | 1.2E-133 | – | |
| PANTHER | 38 | 437 | 400 | 1.2E-133 | – | |
| MobiDBLite | 55 | 86 | 32 | - | – | |
| SMART | 154 | 176 | 23 | 0.0014 | ||
| ProSiteProfiles | 155 | 183 | 29 | 10.786 | ||
| Gene3D | 155 | 196 | 42 | 5.4E-10 | – | |
| Pfam | 158 | 176 | 19 | 1.2E-5 | ||
| SMART | 177 | 198 | 22 | 32.0 | ||
| ProSiteProfiles | 179 | 206 | 28 | 8.919 | ||
| Pfam | 182 | 196 | 15 | 0.0044 | ||
| MobiDBLite | 256 | 274 | 19 | - | – | |
| MobiDBLite | 256 | 327 | 72 | - | – | |
| Pfam | 345 | 427 | 83 | 4.3E-14 | ||
| MobiDBLite | 392 | 412 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0444600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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