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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0444600 |
| Transcript ID | LotjaGi4g1v0444600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT3G16490.1 IQ-domain 26; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|V7CQ97|V7CQ97_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0444600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81751116..81754517) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAATTCTTGTAGAGCTAGAATTAGTACACAAATAATTGAGAGAACAGTGAAACAGAACATTGAAAGAGAAAGTTACA AAATAAAAAAGCAGAGTGCAGTATATACAGCTGTTGGGGTGAGGAAAAGAACAAAATTTATTCATCTAAAAGCTATCTTT TATTGGCTCTGCTTTGATTTTGAAAACACAGCAGAAGAAGAAGGACGCATTATTCGTTTTCTGTTTACTAGTTAAGAACC TGTTTGTTTGGTTTCTGGACTTGGAAGCTGAAGAGAGACTGAGAAAAATAGAATGATACATTACTGGTTCATTCATTCGC TAGAAGCTAAAGAGTAAAATATGGGGGTGGAGTGTGAACCAGTTGCAGAGAAAACAGAGGAAACAGAGGAAAACAGAGGA AGTTGATATGTGATACAGTGAACTGTATAAATTAGGAAACTCTTCACGAGTGTGTCAGACATTTTAGGACACTGAGGTAT CTTACTTTTTAAGGACACGTCGCTCAGGGGTACAGATGAAAAAAGAGATTTCACTTTCTTCTCTTCTTTTCATTCTCAGT TCAGTGGAAAATTTTGATGCTTTCACATTCAACTTTTGAACTGCTTTTTTCCTTTGGAGAATTTGATTCTACCAAGGTGG GTTACCACTTCTCTCTCGTGCTGTGATTATTTTACTACAAACAAACAAGCCACACTTATCTCTCTCTCGATCTATTATAT TTTATATTCATTATTTTAGTGATGTTTGATTTTTCTTACCATGCTTTCTTCCCTCCCTGCATGTTCCAGAGGCATGTTTT TGTCATGTAATGCAGATTTTCACGAGGCATTTTGATTTTTTGTCTTAAAAACTGTGACTTGGTTTTTGTATGTAGGTTCC ACTTCTTCAAACTTGCAGAATTCCAAAGCCTCAATTCACACAACCAATGGGGAGAGCCACTAGGTGGTTGAAGGGCTTGT TTGGGATAAAGAGAGACAAAGAGAACAAAGAAAATTCAAATTCAGCCACCAAAGGGTCTCCTCATGTTCACTCAGAGAGA GATTCCAAAGGTTTATGTCATAATCCTACCACCATACCACCCAACATTTCACCAGCAGAGGCTGCTTGGCTGCAATCCTT CTACTCCGAATCTGAGACGGAGCAAAGCAAGCATGCTATTGCGGTCGCTGCAGCCACAGCAGCAGCCGCGGATGCTGCTG TGGCTGCAGCTCAGGCTGCCGCGGCGGTAGTTCGGCTAACCAGCCACGGTAGAGACACCATGTTCGGTGGTGGACATCAA AGGTTGGCTGCTGTCAAGATTCAAACAGTTTTTAGAGGATACTTAGTAAGTTTAGCTTGCACTTCTCTTAATCATGTCCA ACTATAGACACAAATTCTTGGCTTTCAATTTTTATTAGCTTCACTTTATGTCTGGTCTCATGATTTGCAAACAATTCTTA CTCACAAGCTAAGATTTATAGCTTCTAACTAAAACTGATTTTAAGCATTTCACTGTGGAACCAAGTTATCAGTTAGATTA GATGTAACATAACTTATTTAGAACTTCATATCAGAAATCTTGATAATACATGCTGCTTCTTTACTGTTTTCTTGAGGAAT TGTGGAACATTGAAATTGATTATGGGTTTCTAAACAGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTGC AGGCACTTGTGAGAGGGTACTTGGTGAGGAAGGAAGCAACAGCAACTCTGCATAGTATGCAGGCTCTTATTAGAGCTCAA GCCATGGTAAGGTCTCAGAAGTCTCGTGGACTCATGAGCTCAAAGAATGAAGCATACAGGACTCAAACACTAGCAAGAAG ATCCATGGTACAATATCTCAGATTCTACACTATCTTGTAGCTTGAATAGTGTTTGCTTTAGTGTCTTTTGGATCGGCGTT GTCACATATTTGATTGTGTTGTCACATATTTGATTGGGGTAAAAGTGAGCTGAAAATGAATTAATTATGTCTAGACTCTA GATACATTTCTGAAAAAAGGGATTTCTGGATGAAGTCCAGTAATACAATCTCATAATTGATTATGTTAACGCAAAAATTA CTTTCTCTCTAGCTTCTACCTTCTATCATAATTGACTCTTGGACTGGAGTCAATTCTTCAAGATGACTCACAAGCATTTA TATTGTCATCTAAAAGTGATTTTCCCTACTGAGAATTGTTCCTGAGGTCCCTGATGGAACCAAACATACACTTAGTGATG ATTTGATGTTGAATATAATCTTTCGCAGGAGAAATTTGATGACTATAGGAGTGAGCACACAGCTCCAATCCACAGCAGAA GGCTATCATCTTCTTTTGATAACACCAACAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACAATGGTAGTAGG CCAAAATCAAGATCTCGCAGGAGCAACACATCAATTTCAGATTTTGGCGAAGACCCTTCATTTCACTCTCCTCTCCCATT CACAATTCGCACCCCTGCACCTTCAGATAACAGGAATTTCCATGACTCATCAGAATGGGGCCTAACAAGGGAAGAGTGCA GGTTTTCCACAGCACAAAGCACTCCACGCTTCACAAGTTCTTGTAGTTGTGGTGGTTCTGTAGCTGCACCTTTGACACCT AAAACTGTTTGCACTGAAAACCTCTTCATTGGGCAATATGGCAACAATTTTCCAAATTACATGGCAAGCACTAAGTCTTT CAAGGCCAAATTGAGATCTCATAGTGCTCCAAAGCAACGCCCGGAACCCGGTCCGAAGAAGAGGCTTTCCCTCACTGATT TGATGGAATCTAGGAGTAGTTTCAGCGGGGTTCGGATGCAGAGGTCTTGCTCACAGATTCAGGAAGCTATTAGTTTTAAG AATGCTGTGATGAGTAAGCTTGAGAAATCCACTGAATTTGGTAGGGAGACAGACAAAACTAGATGGTGATTGGTGAACTT ATCGGAAATTCTTCCACAGTTGATTCTGTAAGTAGCTTTTGGGTAACAGAATTTATTTCTGAGAAAAACTAAGCTGATCC AAACATGATATTAGAGGCATTTATGGGAAAGCTAGCATTCTTTTGGTTTTTCAGTTTTCACATTGTTAGTATTAATGGGA ATAGCTTTGTCTTTCTGCACCACATGATTGGCAATTTGAAGACATATGGTGGGTAGGAAACAGGTGAATCAAGACAAAAT AGAAGGATAACAATGAGAACTAAGAGGTCCCCATTGTAACTTGCAAAAAGTTTGGTCATGGAATTATCTTCATGTATTGT CATTATAATCAAGTGTAAGAGTAATTCATTTGATTTCTTTTTTATTTTAGGCAACTCTTTCATCTTTTCTCAATTTATTT TAGTTTAGCTTGCATAAAGTAAAAAGCTCCATTCAATTCTAG
CDS sequence (LotjaGi4g1v0444600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGCCACTAGGTGGTTGAAGGGCTTGTTTGGGATAAAGAGAGACAAAGAGAACAAAGAAAATTCAAATTCAGC CACCAAAGGGTCTCCTCATGTTCACTCAGAGAGAGATTCCAAAGGTTTATGTCATAATCCTACCACCATACCACCCAACA TTTCACCAGCAGAGGCTGCTTGGCTGCAATCCTTCTACTCCGAATCTGAGACGGAGCAAAGCAAGCATGCTATTGCGGTC GCTGCAGCCACAGCAGCAGCCGCGGATGCTGCTGTGGCTGCAGCTCAGGCTGCCGCGGCGGTAGTTCGGCTAACCAGCCA CGGTAGAGACACCATGTTCGGTGGTGGACATCAAAGGTTGGCTGCTGTCAAGATTCAAACAGTTTTTAGAGGATACTTAG CAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTCAAGTTGCAGGCACTTGTGAGAGGGTACTTGGTGAGGAAGGAAGCA ACAGCAACTCTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCCATGGTAAGGTCTCAGAAGTCTCGTGGACTCATGAG CTCAAAGAATGAAGCATACAGGACTCAAACACTAGCAAGAAGATCCATGGAGAAATTTGATGACTATAGGAGTGAGCACA CAGCTCCAATCCACAGCAGAAGGCTATCATCTTCTTTTGATAACACCAACAACAGTGTTGATGGGAGCCCCAAAATAGTG GAAGTGGACAATGGTAGTAGGCCAAAATCAAGATCTCGCAGGAGCAACACATCAATTTCAGATTTTGGCGAAGACCCTTC ATTTCACTCTCCTCTCCCATTCACAATTCGCACCCCTGCACCTTCAGATAACAGGAATTTCCATGACTCATCAGAATGGG GCCTAACAAGGGAAGAGTGCAGGTTTTCCACAGCACAAAGCACTCCACGCTTCACAAGTTCTTGTAGTTGTGGTGGTTCT GTAGCTGCACCTTTGACACCTAAAACTGTTTGCACTGAAAACCTCTTCATTGGGCAATATGGCAACAATTTTCCAAATTA CATGGCAAGCACTAAGTCTTTCAAGGCCAAATTGAGATCTCATAGTGCTCCAAAGCAACGCCCGGAACCCGGTCCGAAGA AGAGGCTTTCCCTCACTGATTTGATGGAATCTAGGAGTAGTTTCAGCGGGGTTCGGATGCAGAGGTCTTGCTCACAGATT CAGGAAGCTATTAGTTTTAAGAATGCTGTGATGAGTAAGCTTGAGAAATCCACTGAATTTGGTAGGGAGACAGACAAAAC TAGATGGTGA
Protein sequence (LotjaGi4g1v0444600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRATRWLKGLFGIKRDKENKENSNSATKGSPHVHSERDSKGLCHNPTTIPPNISPAEAAWLQSFYSESETEQSKHAIAV AAATAAAADAAVAAAQAAAAVVRLTSHGRDTMFGGGHQRLAAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKEA TATLHSMQALIRAQAMVRSQKSRGLMSSKNEAYRTQTLARRSMEKFDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSPKIV EVDNGSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAPSDNRNFHDSSEWGLTREECRFSTAQSTPRFTSSCSCGGS VAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKAKLRSHSAPKQRPEPGPKKRLSLTDLMESRSSFSGVRMQRSCSQI QEAISFKNAVMSKLEKSTEFGRETDKTRW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 402 | 402 | 8.1E-134 | – | |
| PANTHER | 1 | 402 | 402 | 8.1E-134 | – | |
| MobiDBLite | 14 | 49 | 36 | - | – | |
| SMART | 117 | 139 | 23 | 0.0014 | ||
| Gene3D | 118 | 159 | 42 | 4.8E-10 | – | |
| ProSiteProfiles | 118 | 146 | 29 | 10.786 | ||
| Pfam | 121 | 139 | 19 | 1.0E-5 | ||
| SMART | 140 | 161 | 22 | 32.0 | ||
| ProSiteProfiles | 142 | 169 | 28 | 8.919 | ||
| Pfam | 145 | 159 | 15 | 0.004 | ||
| MobiDBLite | 219 | 237 | 19 | - | – | |
| MobiDBLite | 219 | 290 | 72 | - | – | |
| Pfam | 308 | 390 | 83 | 3.9E-14 | ||
| MobiDBLite | 355 | 375 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0444600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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