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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0455000 |
| Transcript ID | LotjaGi4g1v0455000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoglucanase; TAIR: AT1G70710.1 glycosyl hydrolase 9B1; Swiss-Prot: sp|Q9CAC1|GUN8_ARATH Endoglucanase 8; TrEMBL-Plants: tr|I1K5N5|I1K5N5_SOYBN Endoglucanase; Found in the gene: LotjaGi4g1v0455000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82660939..82665902) extracted from Lotus japonicus Gifu genome v1.2.
CCTCATTATTATTCCTCCTATCCCTATACACTTTGACCGGGTCAGAACCCGGACCCGACCCATGTAGCATTCTCTCTCTG CATCGGGCTCCGAAAAACGAACCATTCCTCTATCACCACGTGGCGTCAGCTAATTGGATAACTCACTGGAATCCAAGGGT GCTTTTTCGTTTATATAACTACCTCGTTGCTTTCCCCCTTCATTGCTCACACTCTCAGCACGCACAGCATAGGGGTAGAG TGGGAAAAAACCAAAAACATGGCGCCAAATGCTCTCTTCTCTCTTCCCACATTTCGCGTCCTCGCCATGCTCCTCCTCCT GCTCAGCCCCATCGCCGCCGCAGGTCACGACTACCACGACGCCCTCCGCAAGAGCATCCTCTTCTTCGAAGGACAACGCT CCGGCAGACTCCCACCCGATCAGCGCCTCCGCTGGCGCCGCGACTCCGCTTTGCACGACGGTGCCGCCGCCGGAGTAAGC ACGCACACACGCAACTCACTCTGTTACTGAAATTCATCCTCTAAATTGCAGGGATGAACTTACTATAACCTGCATTGCGT TTATTTTGTGTTTTTTCAGGTGGACTTGACCGGCGGATACTACGACGCCGGAGACAACATCAAGTTCGGGTTTCCGATGG CGTTCACGACGACGATGCTGTCATGGAGCGTGATCGACTTCGGGAAGACCATGGGACCAGAGCTTGGAAACGCGCTGAAG GCGGTGAGGTGGGGGACGGATTACCTTCTGAAAGCGACGGCGAAGGTAGGAACCTCCGGCGTGGTGTTCGTCCAGGTCGG AGACCCTTACTCTGACCACAACTGCTGGGAGAGGCCGGAGGACATGGATACGTCGCGCGCGGTTTACAAGGTGGACGGGT CCCACCCTGGTTCTGACGTGGCAGGAGAAACCGCCGCTGCACTTGCCGCTGCATCCATCGTGTTCAGATCACGTGATCCC TCTTACTCTGCCATGCTCCTCAAACGAGCCGTTACGGTGCGTCGCACTCAATCACTCTCTCTCTTTTTTCCTTTTTCACG AAAAACATTTTTCACTATGTATGGTTGAAAAGTGAAGAAAAACGAGACTCACTTGTGGTAAGTTTGAAAAGTTTGCTAGA GGCTTTTCCTTTACCGGGAATTGATGTGTCTCTTTTTTACCTTTTCTGGAGGGCTTGTTTTGGTCTTTTTAAGTGTGCAT TTAATTTAGTTTTCCGTTAAAATATCGCGAGAAAATGACCGTTGATGATGGACGTTGGTGCAGGTGTTCGACTTTGCTGA CAGGCATCGTGGTGCATACAGTAACAGCCTGCGCCGTGCAGTGTGCCCCTTTTACTGTGATGTCAATGGTTACCAGGTAC AGTGCATCAAGCATTCATGATTCAACACTTGCCGTTTGATGAGATTACTTTTTTTTTTTTGTAAGTTGACTTTAGTGATG TTGATAAATTTTAGGATGAGCTTCTATGGGCAGCAGCGTGGTTGCACAAAGCCTCCCGTAGGCGTCAGTACAGAGAATAC ATTATAAAAAATGAGGTCATTTTGAGAGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCTGGGATTAA TATCCTCATTTCCAAGGTAATCAATATTAACACTACCCAATATAGCTTTGTTATTCCAACTTTGGTTAATTAATTGATGT AGTAACCTTGTTTAGAATAATACAATGTTTTTTTTTAATTTGGTAAATGTTTTCATGTTATTAGGGGTATATTATTAGGA TTAAAAGTGTGGTTATCAAAGTGGATTTGTCTTTAGTGTGTTGTTTTTGTTCCTCTTGTTTTGCGTCCCTCGTTGGTCAT GTGAGGGTGCAGTGCGTGACACTGTTCAGCCATTCAATCTAGCTAGCTGCAGAATATAGAGATTGTAAAAAGTTTCCAAA TCACGTGGTCTGTGCAATGGGTTTTCTATTCGGAATCTCATTCTCATTGGCCCATTCTCAATCTGTACTTGTCATATTAT TAATCATTGATCATCACAACCACAACAGTGGATAATACTATACAAACACCACTAACATTACAATTAGACACACCCAAATT CATATGCATTACATTACACATGTGAGTTACATTGTACACGGACTTATTTTTGTTCTTTTTTAAAATGTGAAACTTACTGT TAAAAGTATAGAAATATGAATCCATCTCGAACTTGATGGAAGATAATTATAAAAATAGTTCATTTTACTTAAATATATAC ACTGTAGACTGTATTAGTTATTTGAGATCATGTTCTAAGAGAGTAAACTATTTCAAATTGGACTTTCTCTTATTGGTGGG TCATAGAAGGAATCTATGACAGTTTGAAAGGTTGTGTGGATATGTAATTATGTATGGTACAACATGCTAGAGAATGTATG TACAGATTGGATTTAAGAAAAGCTTTATCCGTTTATTCATGATATTGAAAAAAGTCAAGATAGCCATGACAAAAGAGAAT GCCAAATGCTGATATGATTGCACATGATGTGAATTGCATTTTTTGAGTTTTATCATGTGGGCTCCTGCTAGAGGGACATC TTCTAATAATTAGAACTTGGATCTAAATCAATAATCATGCCTCTTGATTCATTTATCAAGGGGGAAAATTTGTCTTTATA GTGTTTTAATTTGTAGAATGTTTCTGCCTCTTTAATCAGAACCAAATGGATAAACCAAATTGGCAAATTCTTTGCCCTCT ACATTGTAAACATTAGGAACAAAAAGTATTGCCCTTTAATTATTTCCATCCTTTTAGATCTGGCAAATGGGTGGGTCCCA GTACTGGTGAATCCATGTGCACCATACCACTATTTTCTGCTTGCTTCACTTTCCATCTGGGATCTAGTCTGTGGCTTCTT GTTTAAGCTCTTATCGCTATCACATTCACATTTCCTGTACTCTTTTATTGTGTTGTAGTAACTCAACATTCTGATGCATT TTTTTAATCCCGTGATTCATTGAACATTGAACATAAAAGGTCATCAAATATAATGCAGCAATGAACATAGTTTAATTTAT TTTCTGCAGGAGGTGTTGATGGGCAGAGCAAACTATTTTTCCTCATTCAAAGAAAACGCTGATGGATTTATTTGTTCAAC ATTGCCTGGAATTCCTCACCCTCAAGTTCAATTTTCCCCAGGTATTCCCTCACTGTTTTCAACTTTGTCCATTTTGTTGT TGAGAAAAGTGACTCCTGATAATGACAATTAAACAATGATTATGATTAACAAAGCCATTTATTATGTTTGCTTTTGAGAG GAAAAGCCTTTGATTGGGTATTTGTGTACACACACTCCTTCCATTGCATTGATATTCCTGCACAATTATTGCAATAACGG TATTTAGTCACTGTTTTTTCTAACTCTGTTGTTGGTTAATTGAAAAAGGTGGGCTTATCTTCAAGGCAGGTGGGAGTAAC ATGCAGCATGTAACATCCTTGTCCTTCCTCCTCCTAGCATACTCCAACTACCTAAGCCACGCCAATAAGGTTGTGTCTTG TGGTCAGACCACTGTCACCCCTGCATTTCTCAGGCACGTCGCCAAACGTCAGGTGAGACTACTATTACTTCAAGTGAATG CTTAATTTCATCCATCAACGTGTAATTATTGGGCGAATTAGTATTTAATTATGTCAAATGTCTATTCAGTTAATCTCCAT GATCAGATAAAACATAGGTAGTTAGTCCCCTACACGGACATTTGACAATATTAAAAACTTTAGAAATATTTCTTTCTTCT AGTAACTTGCTCAATGCTTATCATTTAAAAAATTGAGCATTCACTCTACTACTTCTTGGCTAAATTTCATTCCACTAGTG GGGTCCCAACACGAACTTCACATAACCTTTGATTAAATCAGGGACCAATTTCTAGTTTTCAACAACTGACAAAATTAACG GCTACAATTTTGTCCTTTCCTGAGAATCGTTGAAGTAATAAAAGAGATGAACAATCTCATCATGTGATAGGTACACAAAA TGGTAACGTTATGTTTTCATGTGTTAAATGATGCATGTGGGTGTCTTTTTTACTAGGTGGACTACATTCTTGGGGACAAC CCGTTGGGAATGTCCTACATGGTTGGATACGGTGCACGCTACCCGCAGAGGATACATCACCGTGGCAGCTCGCTTCCCTC AGTGGCAACCCACCCGGCCCACATAGGTTGCAAAGCTGGATCTCAATACTTCTTCAGCCCAAACCCCAACCCAAATGTCT TGGTTGGAGCTGTGGTGGGCGGGCCCACTAACAATACAGATTCATTCCCTGATTCAAGGCCTTTCTTTCAGGAGTCTGAG CCCACGACATATATCAATGCTCCTTTGGTGGGTCTGCTTGCTTTCTTCACAGCTCACCCTTGATTCTGCAATTTGACCCT AAAAAAATTCTGCAAATGTATAATCTATTATTATTGTTATGCCTATGTGGTGTGCAAAATGGTCACCCTTAGAAGAAAAA AAAAACGAAAAAGAAGAAAGTGGAGAAAGAATGTCAGTAATGTAATAGTATCATGATTTGTGGTTGTTTTCTCTATCCAT TAAGCTAAGTGAAGGGATAGGGCAATTTGTAAAGGGTTTTAGTAACGGGGCAAGTGTAGAAGGTTTATTCTCTACCGAGG TTGAAGTGGTTTAAGTTTAGTTTTTATCAAATGTGCATGCTGAAATTTACGTCCTAATTTTTTCAATCAGGAATTAAATT CGTTAAACTATTTCGTTACTACTCAGCTCAACAGGGCCGGCCCAACACCAAATGAGGCCTAAAGCGAATTTTAATTTTGA GAGCCTTGAAACATGTTTGATCTAATATAAAATTTTGTTAATTTTAATTTTGGAGGCCTTTTTTACTTAAGAAAAAAAAT CGGAGGCCTTTTTTACTTAAGAAAAAACAAAAAAAATTGGAGGCCTAAAGCCCTTGCTTGGGTGGCTTTACCCTTGGGCC GGCC
CDS sequence (LotjaGi4g1v0455000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCCAAATGCTCTCTTCTCTCTTCCCACATTTCGCGTCCTCGCCATGCTCCTCCTCCTGCTCAGCCCCATCGCCGC CGCAGGTCACGACTACCACGACGCCCTCCGCAAGAGCATCCTCTTCTTCGAAGGACAACGCTCCGGCAGACTCCCACCCG ATCAGCGCCTCCGCTGGCGCCGCGACTCCGCTTTGCACGACGGTGCCGCCGCCGGAGTGGACTTGACCGGCGGATACTAC GACGCCGGAGACAACATCAAGTTCGGGTTTCCGATGGCGTTCACGACGACGATGCTGTCATGGAGCGTGATCGACTTCGG GAAGACCATGGGACCAGAGCTTGGAAACGCGCTGAAGGCGGTGAGGTGGGGGACGGATTACCTTCTGAAAGCGACGGCGA AGGTAGGAACCTCCGGCGTGGTGTTCGTCCAGGTCGGAGACCCTTACTCTGACCACAACTGCTGGGAGAGGCCGGAGGAC ATGGATACGTCGCGCGCGGTTTACAAGGTGGACGGGTCCCACCCTGGTTCTGACGTGGCAGGAGAAACCGCCGCTGCACT TGCCGCTGCATCCATCGTGTTCAGATCACGTGATCCCTCTTACTCTGCCATGCTCCTCAAACGAGCCGTTACGGTGTTCG ACTTTGCTGACAGGCATCGTGGTGCATACAGTAACAGCCTGCGCCGTGCAGTGTGCCCCTTTTACTGTGATGTCAATGGT TACCAGGATGAGCTTCTATGGGCAGCAGCGTGGTTGCACAAAGCCTCCCGTAGGCGTCAGTACAGAGAATACATTATAAA AAATGAGGTCATTTTGAGAGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCTGGGATTAATATCCTCA TTTCCAAGGAGGTGTTGATGGGCAGAGCAAACTATTTTTCCTCATTCAAAGAAAACGCTGATGGATTTATTTGTTCAACA TTGCCTGGAATTCCTCACCCTCAAGTTCAATTTTCCCCAGGTGGGCTTATCTTCAAGGCAGGTGGGAGTAACATGCAGCA TGTAACATCCTTGTCCTTCCTCCTCCTAGCATACTCCAACTACCTAAGCCACGCCAATAAGGTTGTGTCTTGTGGTCAGA CCACTGTCACCCCTGCATTTCTCAGGCACGTCGCCAAACGTCAGGTGGACTACATTCTTGGGGACAACCCGTTGGGAATG TCCTACATGGTTGGATACGGTGCACGCTACCCGCAGAGGATACATCACCGTGGCAGCTCGCTTCCCTCAGTGGCAACCCA CCCGGCCCACATAGGTTGCAAAGCTGGATCTCAATACTTCTTCAGCCCAAACCCCAACCCAAATGTCTTGGTTGGAGCTG TGGTGGGCGGGCCCACTAACAATACAGATTCATTCCCTGATTCAAGGCCTTTCTTTCAGGAGTCTGAGCCCACGACATAT ATCAATGCTCCTTTGGTGGGTCTGCTTGCTTTCTTCACAGCTCACCCTTGA
Protein sequence (LotjaGi4g1v0455000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPNALFSLPTFRVLAMLLLLLSPIAAAGHDYHDALRKSILFFEGQRSGRLPPDQRLRWRRDSALHDGAAAGVDLTGGYY DAGDNIKFGFPMAFTTTMLSWSVIDFGKTMGPELGNALKAVRWGTDYLLKATAKVGTSGVVFVQVGDPYSDHNCWERPED MDTSRAVYKVDGSHPGSDVAGETAAALAAASIVFRSRDPSYSAMLLKRAVTVFDFADRHRGAYSNSLRRAVCPFYCDVNG YQDELLWAAAWLHKASRRRQYREYIIKNEVILRAGDTINEFGWDNKHAGINILISKEVLMGRANYFSSFKENADGFICST LPGIPHPQVQFSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVSCGQTTVTPAFLRHVAKRQVDYILGDNPLGM SYMVGYGARYPQRIHHRGSSLPSVATHPAHIGCKAGSQYFFSPNPNPNVLVGAVVGGPTNNTDSFPDSRPFFQESEPTTY INAPLVGLLAFFTAHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 13 | 13 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| PANTHER | 13 | 496 | 484 | 1.8E-289 | – | |
| PANTHER | 13 | 496 | 484 | 1.8E-289 | – | |
| Phobius | 14 | 22 | 9 | - | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Gene3D | 26 | 495 | 470 | 2.8E-158 | ||
| Phobius | 28 | 496 | 469 | - | – | |
| SUPERFAMILY | 30 | 494 | 465 | 1.46E-152 | ||
| Pfam | 32 | 489 | 458 | 4.8E-136 | ||
| ProSitePatterns | 391 | 417 | 27 | - | ||
| ProSitePatterns | 465 | 483 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0455000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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