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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0455000 |
| Transcript ID | LotjaGi4g1v0455000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoglucanase; TAIR: AT1G70710.1 glycosyl hydrolase 9B1; Swiss-Prot: sp|Q9CAC1|GUN8_ARATH Endoglucanase 8; TrEMBL-Plants: tr|A0A1J7I5L3|A0A1J7I5L3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0455000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82661197..82665321) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGCCAAATGCTCTCTTCTCTCTTCCCACATTTCGCGTCCTCGCCATGCTCCTCCTCCTGCTCAGCCCCATCGCCGC CGCAGGTCACGACTACCACGACGCCCTCCGCAAGAGCATCCTCTTCTTCGAAGGACAACGCTCCGGCAGACTCCCACCCG ATCAGCGCCTCCGCTGGCGCCGCGACTCCGCTTTGCACGACGGTGCCGCCGCCGGAGTAAGCACGCACACACGCAACTCA CTCTGTTACTGAAATTCATCCTCTAAATTGCAGGGATGAACTTACTATAACCTGCATTGCGTTTATTTTGTGTTTTTTCA GGTGGACTTGACCGGCGGATACTACGACGCCGGAGACAACATCAAGTTCGGGTTTCCGATGGCGTTCACGACGACGATGC TGTCATGGAGCGTGATCGACTTCGGGAAGACCATGGGACCAGAGCTTGGAAACGCGCTGAAGGCGGTGAGGTGGGGGACG GATTACCTTCTGAAAGCGACGGCGAAGGTAGGAACCTCCGGCGTGGTGTTCGTCCAGGTCGGAGACCCTTACTCTGACCA CAACTGCTGGGAGAGGCCGGAGGACATGGATACGTCGCGCGCGGTTTACAAGGTGGACGGGTCCCACCCTGGTTCTGACG TGGCAGGAGAAACCGCCGCTGCACTTGCCGCTGCATCCATCGTGTTCAGATCACGTGATCCCTCTTACTCTGCCATGCTC CTCAAACGAGCCGTTACGGTGCGTCGCACTCAATCACTCTCTCTCTTTTTTCCTTTTTCACGAAAAACATTTTTCACTAT GTATGGTTGAAAAGTGAAGAAAAACGAGACTCACTTGTGGTAAGTTTGAAAAGTTTGCTAGAGGCTTTTCCTTTACCGGG AATTGATGTGTCTCTTTTTTACCTTTTCTGGAGGGCTTGTTTTGGTCTTTTTAAGTGTGCATTTAATTTAGTTTTCCGTT AAAATATCGCGAGAAAATGACCGTTGATGATGGACGTTGGTGCAGGTGTTCGACTTTGCTGACAGGCATCGTGGTGCATA CAGTAACAGCCTGCGCCGTGCAGTGTGCCCCTTTTACTGTGATGTCAATGGTTACCAGGTACAGTGCATCAAGCATTCAT GATTCAACACTTGCCGTTTGATGAGATTACTTTTTTTTTTTTGTAAGTTGACTTTAGTGATGTTGATAAATTTTAGGATG AGCTTCTATGGGCAGCAGCGTGGTTGCACAAAGCCTCCCGTAGGCGTCAGTACAGAGAATACATTATAAAAAATGAGGTC ATTTTGAGAGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCTGGGATTAATATCCTCATTTCCAAGGT AATCAATATTAACACTACCCAATATAGCTTTGTTATTCCAACTTTGGTTAATTAATTGATGTAGTAACCTTGTTTAGAAT AATACAATGTTTTTTTTTAATTTGGTAAATGTTTTCATGTTATTAGGGGTATATTATTAGGATTAAAAGTGTGGTTATCA AAGTGGATTTGTCTTTAGTGTGTTGTTTTTGTTCCTCTTGTTTTGCGTCCCTCGTTGGTCATGTGAGGGTGCAGTGCGTG ACACTGTTCAGCCATTCAATCTAGCTAGCTGCAGAATATAGAGATTGTAAAAAGTTTCCAAATCACGTGGTCTGTGCAAT GGGTTTTCTATTCGGAATCTCATTCTCATTGGCCCATTCTCAATCTGTACTTGTCATATTATTAATCATTGATCATCACA ACCACAACAGTGGATAATACTATACAAACACCACTAACATTACAATTAGACACACCCAAATTCATATGCATTACATTACA CATGTGAGTTACATTGTACACGGACTTATTTTTGTTCTTTTTTAAAATGTGAAACTTACTGTTAAAAGTATAGAAATATG AATCCATCTCGAACTTGATGGAAGATAATTATAAAAATAGTTCATTTTACTTAAATATATACACTGTAGACTGTATTAGT TATTTGAGATCATGTTCTAAGAGAGTAAACTATTTCAAATTGGACTTTCTCTTATTGGTGGGTCATAGAAGGAATCTATG ACAGTTTGAAAGGTTGTGTGGATATGTAATTATGTATGGTACAACATGCTAGAGAATGTATGTACAGATTGGATTTAAGA AAAGCTTTATCCGTTTATTCATGATATTGAAAAAAGTCAAGATAGCCATGACAAAAGAGAATGCCAAATGCTGATATGAT TGCACATGATGTGAATTGCATTTTTTGAGTTTTATCATGTGGGCTCCTGCTAGAGGGACATCTTCTAATAATTAGAACTT GGATCTAAATCAATAATCATGCCTCTTGATTCATTTATCAAGGGGGAAAATTTGTCTTTATAGTGTTTTAATTTGTAGAA TGTTTCTGCCTCTTTAATCAGAACCAAATGGATAAACCAAATTGGCAAATTCTTTGCCCTCTACATTGTAAACATTAGGA ACAAAAAGTATTGCCCTTTAATTATTTCCATCCTTTTAGATCTGGCAAATGGGTGGGTCCCAGTACTGGTGAATCCATGT GCACCATACCACTATTTTCTGCTTGCTTCACTTTCCATCTGGGATCTAGTCTGTGGCTTCTTGTTTAAGCTCTTATCGCT ATCACATTCACATTTCCTGTACTCTTTTATTGTGTTGTAGTAACTCAACATTCTGATGCATTTTTTTAATCCCGTGATTC ATTGAACATTGAACATAAAAGGTCATCAAATATAATGCAGCAATGAACATAGTTTAATTTATTTTCTGCAGGAGGTGTTG ATGGGCAGAGCAAACTATTTTTCCTCATTCAAAGAAAACGCTGATGGATTTATTTGTTCAACATTGCCTGGAATTCCTCA CCCTCAAGTTCAATTTTCCCCAGGTATTCCCTCACTGTTTTCAACTTTGTCCATTTTGTTGTTGAGAAAAGTGACTCCTG ATAATGACAATTAAACAATGATTATGATTAACAAAGCCATTTATTATGTTTGCTTTTGAGAGGAAAAGCCTTTGATTGGG TATTTGTGTACACACACTCCTTCCATTGCATTGATATTCCTGCACAATTATTGCAATAACGGTATTTAGTCACTGTTTTT TCTAACTCTGTTGTTGGTTAATTGAAAAAGGTGGGCTTATCTTCAAGGCAGGTGGGAGTAACATGCAGCATGTAACATCC TTGTCCTTCCTCCTCCTAGCATACTCCAACTACCTAAGCCACGCCAATAAGGTTGTGTCTTGTGGTCAGACCACTGTCAC CCCTGCATTTCTCAGGCACGTCGCCAAACGTCAGGTGAGACTACTATTACTTCAAGTGAATGCTTAATTTCATCCATCAA CGTGTAATTATTGGGCGAATTAGTATTTAATTATGTCAAATGTCTATTCAGTTAATCTCCATGATCAGATAAAACATAGG TAGTTAGTCCCCTACACGGACATTTGACAATATTAAAAACTTTAGAAATATTTCTTTCTTCTAGTAACTTGCTCAATGCT TATCATTTAAAAAATTGAGCATTCACTCTACTACTTCTTGGCTAAATTTCATTCCACTAGTGGGGTCCCAACACGAACTT CACATAACCTTTGATTAAATCAGGGACCAATTTCTAGTTTTCAACAACTGACAAAATTAACGGCTACAATTTTGTCCTTT CCTGAGAATCGTTGAAGTAATAAAAGAGATGAACAATCTCATCATGTGATAGGTACACAAAATGGTAACGTTATGTTTTC ATGTGTTAAATGATGCATGTGGGTGTCTTTTTTACTAGGTGGACTACATTCTTGGGGACAACCCGTTGGGAATGTCCTAC ATGGTTGGATACGGTGCACGCTACCCGCAGAGGATACATCACCGTGGCAGCTCGCTTCCCTCAGTGGCAACCCACCCGGC CCACATAGGTTGCAAAGCTGGATCTCAATACTTCTTCAGCCCAAACCCCAACCCAAATGTCTTGGTTGGAGCTGTGGTGG GCGGGCCCACTAACAATACAGATTCATTCCCTGATTCAAGGCCTTTCTTTCAGGAGTCTGAGCCCACGACATATATCAAT GCTCCTTTGGTGGGTCTGCTTGCTTTCTTCACAGCTCACCCTTGA
CDS sequence (LotjaGi4g1v0455000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCCAAATGCTCTCTTCTCTCTTCCCACATTTCGCGTCCTCGCCATGCTCCTCCTCCTGCTCAGCCCCATCGCCGC CGCAGGTCACGACTACCACGACGCCCTCCGCAAGAGCATCCTCTTCTTCGAAGGACAACGCTCCGGCAGACTCCCACCCG ATCAGCGCCTCCGCTGGCGCCGCGACTCCGCTTTGCACGACGGTGCCGCCGCCGGAGTGGACTTGACCGGCGGATACTAC GACGCCGGAGACAACATCAAGTTCGGGTTTCCGATGGCGTTCACGACGACGATGCTGTCATGGAGCGTGATCGACTTCGG GAAGACCATGGGACCAGAGCTTGGAAACGCGCTGAAGGCGGTGAGGTGGGGGACGGATTACCTTCTGAAAGCGACGGCGA AGGTAGGAACCTCCGGCGTGGTGTTCGTCCAGGTCGGAGACCCTTACTCTGACCACAACTGCTGGGAGAGGCCGGAGGAC ATGGATACGTCGCGCGCGGTTTACAAGGTGGACGGGTCCCACCCTGGTTCTGACGTGGCAGGAGAAACCGCCGCTGCACT TGCCGCTGCATCCATCGTGTTCAGATCACGTGATCCCTCTTACTCTGCCATGCTCCTCAAACGAGCCGTTACGGTGCGTC GCACTCAATCACTCTCTCTCTTTTTTCCTTTTTCACGAAAAACATTTTTCACTATGTATGGTTGA
Protein sequence (LotjaGi4g1v0455000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPNALFSLPTFRVLAMLLLLLSPIAAAGHDYHDALRKSILFFEGQRSGRLPPDQRLRWRRDSALHDGAAAGVDLTGGYY DAGDNIKFGFPMAFTTTMLSWSVIDFGKTMGPELGNALKAVRWGTDYLLKATAKVGTSGVVFVQVGDPYSDHNCWERPED MDTSRAVYKVDGSHPGSDVAGETAAALAAASIVFRSRDPSYSAMLLKRAVTVRRTQSLSLFFPFSRKTFFTMYG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 14 | 212 | 199 | 4.9E-109 | – | |
| Phobius | 14 | 22 | 9 | - | – | |
| PANTHER | 14 | 212 | 199 | 4.9E-109 | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Gene3D | 26 | 215 | 190 | 4.0E-79 | ||
| Phobius | 28 | 234 | 207 | - | – | |
| SUPERFAMILY | 29 | 211 | 183 | 9.64E-73 | ||
| Pfam | 32 | 211 | 180 | 4.3E-70 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0455000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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