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LotjaGi4g1v0459300.1

Overview

Field Value
Gene ID LotjaGi4g1v0459300
Transcript ID LotjaGi4g1v0459300.1
Lotus japonicus genome version Gifu v1.2
Description Mitochondrial import receptor subunit tom40, putative; TAIR: AT3G20000.1 translocase of the outer mitochondrial membrane 40; Swiss-Prot: sp|Q9LHE5|TO401_ARATH Mitochondrial import receptor subunit TOM40-1; TrEMBL-Plants: tr|I3TAE4|I3TAE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0459300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:83000291..83005587) extracted from Lotus japonicus Gifu genome v1.2.

CTAACGGGTCGGGTAGAAAGTGTGAGGTAAGGCAAAGAGTGTGGTGGCATTAGCATTTAGCGTAAGAGAAGAAAAACTAG GGTTTTAGCAGTCGTCGAAGATTTGTTTGGAGAGGGGTTTTAGAAATTTTCTGAATCTTCCCCTCTCTCTCTCTCTCTCT CATCATTCCCAAACCCTATCTCTCTCTTTCTCCTCCGTAGCAATGGCGACCGTGCCTCCTCCCACCGCCACCAAGCCCGA TGAGAAAACCGATTACTTCAACCTTCCTTGTCCCATTCCCTTCGAAGAGCTCCACCGTGAAGCCATGAGTCAGTTCCTTC TTCATTTTCATTTTCAATTTCACTTTTCGTTTCCCTTCATCTCGGAGAATGTAATTTCCTTGTTTTTGTTCACTGTTGTC AGTGTCTTTGAAGCCTGATCTTTTCGAGGGTATGCGTTTTGATTTCACCAAGATGCTCAATCAGAAATTCTCCCTCAATC ACAGGTATCTTCTCTTCTCATTGATTTGTATTTCTCAAGTGAAGATTATGCAAGTTATTTAATGTTGATAATTTATTTGG TTTTTTCATCTTACCAGTGTGTTGATGGGACCTACTGAGATTCCTTCTCAGTCGACCGAGACTATTAAGATTCCTACCGC GCACTATGAGTTTGGCTCAACCTTCATTGATCATCCTAAGGTAACTTGTTGTGTTTGATTGAAATGACCTTTTAGTTTGA TTTTTTAAATTGCACTCTCAATGATGATGATGGTTCTCTGCAGTTGTTGCTATGGGGGAGAGTCATGACTGATGGCAGGC TGAATGCAAGGGTCAAGTGTGATTTGTCTGAAAATGTCACTTTTAAAGCCAATGCTCAGGTACCTTTTATGCTTGTTTCT ATTATTATGTCAAATGCAGTCCATAGTTTTCTGCTGTTTCACGCGCCCTCGACATTCTGCTACTTCCCGGATTAGTTAGT ATCTATCTTTTAGACTTGATTATAAGTTCAAGCCTTAATACTATTTTGTCATGTCCGGCTTCAAGTTTGAGGCACTGACT TACGACTTATTAAGGCCATTATTATTGTATAGTTATTGGTTAATGACATTGTTTATGCTTTCCTTGTCTCTTTACTATTT GTTTATGCTTTCCTTGTCTCTTTTACTTGTCGTAACCTTACGTTTTTTGTCTGCTTGAACAGCTTTCGAACGAGCCACAC ATGTCTCATGGAATGATGAACTTCGATTACAAGGTCAACTAGTTTCTCATTTATGGATTAAATCATTTGAAGCCTTCCTC TTCTAGCTGTGCATTTGCATGTTCTTTCCAGTAAATATGGTCATTTGTTTGACATATATTCTGCTCAAGTTTCTTAATGG AAGTATCATGACTATCCTGGGAAATTGTCTTTAAGTCCTTTCCTTGTTTTATAATTCTCAATTCATTATGTTTTTCAGGG ATCAGACTACAGGTCTCAGTTTCAATTTGGAAATGGCGCTTTGCTTGGAGCAAGCTACATTCAGGTTGGGCATCTGCATG CAGTGTGCAGTATTTCTATTCTTTTTGTTTGGTTTTATATTTAAGTGACAATCTGGCTGAGATTAACAAAGAAGACTGTC AAGTCATTTACTTGTTTGTAACTTTGTATTGTGAATATTAGGGAAGGACATTTAGATGTTGCCATGCTAGTTTTACTATC AACATACAGGCTCCTTTTTCAGTTGGAATTATTTGACATTTTACTCATCCAGTTATTCAAGTCTGTCAAAATAATGATAA ATGGCCAAGTATAAGTGATTTCATTTAATCTAAATGATGTTTCCCCCCCCCCCCCGGCATAAAAGGAAAGATGTTTATAA TTGCGCAGTGTGGGGATTCTATCTGCAAATTAGTTTTAGGTAAAGATAGCTTTGTCTAGTTATGCAGTGGTGGATATAAA TATGGAAGAAAACACATTGTATAGAAATGGAATATTTGAGGCTTTATTGATAGTTAATTGATTGTTGCCAACATTTTTAA CTCAATAGTAGCTTGGTTGCAAGTGCCTGTACGTCTTCAATTAAAAGTCAAGAAAGGCGTTAAGCTTTCATGGGAATTAT CCCTCTCACTGTTGCTACCTCGCTGGTGAATAAATAATTGTTTATTGGCTGGTTCGTGTTGGTTTTGGCTAATACTTAAG GTCATGTGGTTGGCAAATACGCCAATTTCATTGTTGAATGACAGAATTATTGAACGCTTCTTTGTATGAAGTGGTTTAAT AAGTTTGAATTTGTGGACTTGTGCATCTGGCCATTAGCGTTTTTTTATTGAAAACAAAGTGCGTGAACATTTCCTGAACC ATGTTCTTCTGGTATAGATATTTAATTTCATTTGATTTCTGTGGACACTATTTGCTTCCTTTCAAATAGTTTTACTGATC AGCTATTTGGTTTGTTTGGATGGCTTGTAATTAGTGAGATACTAAGATCTTGATGCTAGACTAGTTTTATACTATTACTA ATATTAGTAATTGATAGTTTCAAAGCTCATCATAGTGTTACTATCAATTTGATTCTTTATACACTTAGCTTATTATGGTC AATTTTTCTCCTGTTACCTTCGGTTTGATGCATAAGTAGTTAGTGTTGTTATTTGGGTGATCGGAAGATCGCTACAGTAG GTGCATTGCACAGCATCATTCTCTATAAACAATTGCTGAGCTTTACTCTGATCTCTGTCTGCATCGGATGGGACAATTCA TAATTGTATTTGAACTCATCTGATTTATTATTGAAAACATTGACTTCTGTTTTACAGAGCGTGACCCGCAATTTATCACT GGGCGGTGAGGTATTTTGGGCTGGTCAGCATCGTAAGTCTGGTGTTGGTTTTGCTACTCGCTACAACACTGATCAAATGG TATGATGACTAAAGAATTGCCCCTACTTACATTTTTCAGCTCGTTGCCCTTGTTTCTCTTCTTATATACCTTATATTGAA TTTTTATTTGTTTATTTATCTATTAAATTATATTTTTAATCTGATATTTGTAAAACATTTCTTTCTGGTATATTTTATAC TGCTTCATCAACTAGTTTCAATTTTCAAAGATTTTGTATTTCTAATTTTCCTGGAGAAAAATAGTTTTATACATTTTAAA ATACTGAGTGGATACAGTATGCTTCTTTATGTATCCGCCTTGTCAAACATTCATTATGCTATACTGATTCTATCGACTTA CTCTATTACATCCAGGTTGCTACAGGGCAAGTTGCTAGCACTGGAATGGTTCTTTTAAGCTATGTTCAGAAGGTGTCTGA GAAGGTGAGTCAATCTATTCGTGCCATAGTTGATTTATGCCTTCAATTAAATTTTTTATTTCTTATACGTGTCCCTTTCA GGTTTCTCTAGCTTCTGAGTTGATGTGTAACTACTTGTCAAGAGATGTCACTGCTAGCTTTGGTTATGACTACATCCTTA GACAGGTAGGTTCTGTCTTTCTTGAATTCAGTCACAGATTAACTAATACAACATGGATGCAAACTTGTGGAGCAGTTGAC ATTACGTTTTAATTTATTGGTTATAATTGAGCTTTCTGAGCTATCTACTTGGGTTCATGGGACTGAAGTTTGCAGTAACG GATGGGCTGGAGCTGGAGTGGAAATGAACAATTTATAAAATCTTCACCACATGTCTAAATACATTAAGTTTCATTCATTG CTTGCTGTTTATGTCAATTTAAGTATTTAAGCAGACATAATTAAATGTTTGTATGTTTGCTTGCATGTATTTGCACCTCA TTCTGTAGATAGAAAACACCTCTAGATCATGTGGTGAGTAGGTAGTGAATGCCTAACCTTGCGTATGATAATTTTCTCAT GTTTTGAGATTACTTCTTCGTATCTTTGACTGTACACGATACTGCTATGAAACCTGACATTTATTCAGCGTCTTCTCATT CCTGATATCTTGTCTTCATAATTAGTTTACTGATTACGGACAGCTGAACAAATTTTGTACCTGAAATTTTTATTTGGTAA GATGTTTCTGCGTTTCTGACTTTCTGCTATAATAAGTGAAGAATTGAGCAATTTAGCTATGGTATTGAACTTGTTGAAAT ATAAGCTGACCTACCCATGGTTCCTTTCAACTAGAAAAAAAAGGGCAAAGAAATTGAAAGTAATAAACTGTTTGGATGCA CACCCCTCATTGAAGGTCTATAGGATCACATGCTTTGGCATTAAAAATATTTCTTCATGGCAATAGAAGTTCAAGTGAAA TGGATTATTATGTGGTTGATTTTGGGTCAGTTGGCGATTTCATTACTTGTGTAAAGACATTTAACTTCTGCTTTTGAACT TTGATGATAATGAAGAATTGCTGACCGATATTGTCGTGTTCAAAAGTGACCTTATTATCTACATTGTACATCTTGTTTTG GTTTGTTGTTACAGTGCCGTCTTAGGGGAAAGGTTGATTCCAATGGCTGTGTCGGGGCTCTTCTGGAGGAGCGGTTAAAT ATGGGTCTCAATTTTATTCTTTCTGCAGAGGTCAGAGCACTTTTTTTTCTGCTCATTGTTAATCTGTACTGGTATACGCC ACAAAAATATTTGTTGGGGATGTTGAAATGTCAGTCTCATTTTCCAATTTTGCCTTGACATGAGTTTCATGTTTGCTTAT TGCAGCTTGATCACAAGAAAAAAGACTACAAATTTGGATTTGGTTTGACTGTTGGGGAATAACTTAGCAAGGACTAGAGC TGTGTTTCCATTGCTGTAGCCAGCTTAGCAAGCTTTCTTGGTTCTTTTTCCTTGTTGGAGACTTTTATTTTTTCTGAAAA AAGAGATAACAGAGGAAGCATCATTGTGTCGGGAAACACAATTTATAATGCACGAGTTGCTGGAGAAATTTTAGTAGTCA TCGATTTATTTGGAAACTTGCCGAGAAAATCTGAATTATTTCGAACTCTTGCCCTGTTTTCCCTTGAGGGGGATGTAGAG TGATATCTTATCAATCCATATTGTCAGTTTCAATTTCAATAATGCTTCTAGTAATCTAGAGCTCGTGTTATCCATCCATT TCTGATAATAATGTCTTGGTAAGTTGGTATCCCAATTTAAATCTAAAGTCCCTGCATAATTTGGTGTTGGATTTTGGTTT CGAAACTCTACATACGTACATTCAAAATTACAAAATAAAAGATATTACTTTGGACATGCCAAAAATATTTTCTCCCACAA AAAAGAAAGCATGTTATACAAATTATAGTGTTTTTTTCTTAAAAGCAAAGGTTATAGTTTCAAAAACATTTATTTTAATA CTCTACAACTTTATTGT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0459300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGACCGTGCCTCCTCCCACCGCCACCAAGCCCGATGAGAAAACCGATTACTTCAACCTTCCTTGTCCCATTCCCTT CGAAGAGCTCCACCGTGAAGCCATGATGTCTTTGAAGCCTGATCTTTTCGAGGGTATGCGTTTTGATTTCACCAAGATGC TCAATCAGAAATTCTCCCTCAATCACAGTGTGTTGATGGGACCTACTGAGATTCCTTCTCAGTCGACCGAGACTATTAAG ATTCCTACCGCGCACTATGAGTTTGGCTCAACCTTCATTGATCATCCTAAGTTGTTGCTATGGGGGAGAGTCATGACTGA TGGCAGGCTGAATGCAAGGGTCAAGTGTGATTTGTCTGAAAATGTCACTTTTAAAGCCAATGCTCAGCTTTCGAACGAGC CACACATGTCTCATGGAATGATGAACTTCGATTACAAGGGATCAGACTACAGGTCTCAGTTTCAATTTGGAAATGGCGCT TTGCTTGGAGCAAGCTACATTCAGAGCGTGACCCGCAATTTATCACTGGGCGGTGAGGTATTTTGGGCTGGTCAGCATCG TAAGTCTGGTGTTGGTTTTGCTACTCGCTACAACACTGATCAAATGGTTGCTACAGGGCAAGTTGCTAGCACTGGAATGG TTCTTTTAAGCTATGTTCAGAAGGTGTCTGAGAAGGTTTCTCTAGCTTCTGAGTTGATGTGTAACTACTTGTCAAGAGAT GTCACTGCTAGCTTTGGTTATGACTACATCCTTAGACAGTGCCGTCTTAGGGGAAAGGTTGATTCCAATGGCTGTGTCGG GGCTCTTCTGGAGGAGCGGTTAAATATGGGTCTCAATTTTATTCTTTCTGCAGAGCTTGATCACAAGAAAAAAGACTACA AATTTGGATTTGGTTTGACTGTTGGGGAATAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0459300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATVPPPTATKPDEKTDYFNLPCPIPFEELHREAMMSLKPDLFEGMRFDFTKMLNQKFSLNHSVLMGPTEIPSQSTETIK IPTAHYEFGSTFIDHPKLLLWGRVMTDGRLNARVKCDLSENVTFKANAQLSNEPHMSHGMMNFDYKGSDYRSQFQFGNGA LLGASYIQSVTRNLSLGGEVFWAGQHRKSGVGFATRYNTDQMVATGQVASTGMVLLSYVQKVSEKVSLASELMCNYLSRD VTASFGYDYILRQCRLRGKVDSNGCVGALLEERLNMGLNFILSAELDHKKKDYKFGFGLTVGE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10802:SF4
7 303 297 1.3E-148 –
PANTHER
PTHR10802
7 303 297 1.3E-148
IPR037930
CDD
cd07305
21 302 282 2.46545E-110
IPR037930
Pfam
PF01459
23 296 274 1.1E-76
IPR027246
Gene3D
G3DSA:2.40.160.10
197 302 106 1.0E-12
IPR023614

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005741
Cellular component Mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.
Subterm of
GO:0008320
Molecular function Protein transmembrane transporter activity Enables the transfer of a protein from one side of a membrane to the other.
Subterm of
GO:0030150
Biological process Protein import into mitochondrial matrix The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.
Subterm of
Part of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0459300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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