Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0463500 |
| Transcript ID | LotjaGi4g1v0463500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Golgin candidate 2; TAIR: AT1G18190.1 golgin Putative 2; Swiss-Prot: sp|B0F9L7|GOGC2_ARATH Golgin candidate 2; TrEMBL-Plants: tr|K7L530|K7L530_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0463500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83351396..83356638) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATATTGTAACTTACGTAGAAGTTGTTTGGACAAGGTGATAGTCCAAAAAAATATATAAATTACATATAGGTGAGG TGACCCAAAGAAGCCAATGGGTTTGGGCTTGTGTGGACTGGAAGTTGATACTTTGATTGGGCTGGGGCTGAGGAGGTTGA AGCCCGTTAGTTAGTTGGTGGTTGTGACTCTACCTTCCTTCGTTTCACTCAGTCTCGATCTTGTTCCTTCGTAATTCATT CACCGTTTTGTTCTTCACCATGCAAATTGCAATTGCATCTTACTCTCAGAATAAGAAAAAGAAAGTAATCTTGGAGCATA TCGTTTTCCTCTCATGGCGAATTGGATCTCCTCCAAACTCAAAGCCGCAGAGAACATTCTCCATCAGGCAAGTGCAAGTC CAACTACAATTCTAATCATTCTTCGCATTTTCTTCCTTAATTTTAATTTTAATTTTAATTTTAATTTTCATAATCTCTTC TTCTATTCTCTTACGAATTTCGTTTTCCCCTCATTCGTAATTGCGTTTCCAACTGTTCAGATCGATCAGCAAGCAGCCGA ATCGCTTCGGAAGAACGAGAAGCTTCGATCCGACGAACTCGGCATTCATGATGCTCCTGCAGCCAAATCAGGGAGCGTCG TCTCTCTCAAGAATCAATTGAAGAAGAAACCCTCCGAAAACAATGACTATCATGGTAAACTGCACAGTGACCCCAATTTT ACAACTGCACCCAAATCTAGCCCTACCCCTACCCTCGCAGATGCTGATTGGACTCAACTCCTCAGCTCACCTACTCACTC TATAGCTTCTGCTTCTGGAGGGGATCACGGTAATGGGGCTCGTGGTTTCAACAAAAATGGTAGGAAGCACAAGGATTTAT TGCTTTCGGATGTAAAGAGGAATCACAAAACCGGTACCAGTGGTTCAAGGTCTTTGCAGAGGTTAAACTCTGTCAAATTG ACTAGAAAAACTAGTGACGATGGGATGGGCTTTACCTCAGAGAGGCATTCAACTGATGGTAAACCTTTGGTTGAGAAGAA TGATAAAGCAAATCAACAACACCAGCACACTTTTAATTATAGGGATATTTCTCCACCAGAATCTCTGCAGGAAGACAACA AAACTTTGCCAATGCCCGTGTCTGACCTTGATAATGCTAAGATTGCACCAGATGTTGTTCCTGGTCAGCTTAGAGGTGCA ATGAAAGCGAGGCATGGGCTTAATTCACTTTCTGGAAATTCAAAATCTGATGATTTCAAAAGGGGTTCTTCCATCAGTGA TGGAAGTTCTGAGTCAGATACAGATTCCGGTTCATCGTATGATTCTGAAAGTGAACATGAGAGGGAGGAAAGGAGAAAGA AGAGGGAAAGGGTCCTGGCGGAGAAAGCAGCAGCTATAGCAATAAATGCTATCAGGGAAAAGGAGAATATGGTGGCCAAA TTAGAAGGCGAGAAACAAAGTCTAGAGAAAATACTTGAAGAGCGAGCTTATCAACAAGCCCAAGAGGTAATGTCATGACA GTTCCTAGAAGTGATCTTTATGTTTTCTTTTTTTCTCTTTTACTCTTTTTTGTTATGCTGCATATGCTCAACATGATGTA TCTAATGTAGGATATGGATGTTCTTGGTACTTTGGTGGGAAAAGTGTCCTTTTATAGTATAGTAATTTTGCACTTAATTC TTCTTCGTTATTTATCCAATTTTTTTGCTCCTTCCTTTAGGCTTCACAGCTTCAGAACACTACGATGGAAACAATGGAAG CTGTTGAGTTAGAAAAGCAGAAACATAATAATACTAGAATGGAAGTTCTTGCACGTTTAGCGAAACTGGAGGTATGTTAA TTTCACGTGTTTAAGCCATTTGCTTATAACAAATATATGATGTATAGCTTACTACAAGTTTTTAGTAAATAATTTATCAT GATGTTTTGGTTCTGCAAATATCTAGACAAGCTTGTTATCGATAAATGTCTGGACTGGTTGCAGACTGTTAATGCTGATC TTGCACGATCCCTTGCAGCTGTGCAGTGTAACCTTGAAGTCGAGGTATGTCTATATTCAAAGATGACTAATTTCCACTTC ACATGATTACAAGATTAGCAACCGTATAATTAATAAGATAATTAATTTTACCAAACTGACATCATAATGAGTGCTGATAA GAACCAGGTAACTTAAAACCTTATATATGTTATTGACTCTGACTGTGTCTAGAAAAATTTACCAAATACTGCTAGACCAG GAATTGAAAGTTGAACTAAAAGTTATCCAGTCAACTCCAAAGATGTTGTCATTGTAAATGTAGCTTATTGAAGGATTAAA ATCAGACCCTTATATTGGAATTGAATTAAACAAATCCTTTGGTCATCCTCATATCTGGCCTAGAGTGTTAAATTATTGTT TGTTAATTATGATTTTTGGACCAGGTTAAACAAGTGGCAGAACTCAGACAGAAGATTGTATCAAAAGAGTTTGTTCATGA AGGTACACTGCCCTTTTTTACGGGACATTGAACAGATAATAGTGTCTTTTCCTGGGACTCATTCTAGCTTGAATGTGCAT CAAAACCTTGAAGATTAGTTTTGTGTTTTTAAAAAGGATGTCAAAAGATCAGTATAGGCATATGAAGATAATTTTTAAGC CTGTTGAACAAAGTTGTGCTAAGCTACTGTAGAGATTTCAGGAACCACATGAACTTAGATTTCTCTTTCTCTTGCATGAG AATATCTTTGATGAAAAAAATTCTTTCATTCTGAGCGGTATTCATGGAAATGAAAAAGATCGAATGGTTGTAAAGTGTAA ACAGATAGTGAAAATTAAATTATTATGTACTGTTGCAAATGTTAGGGTTCTAGAGTAATCGAGATTATCTTGAAATGAGC TGGTCTGTTAATAGGTTGATCCTTTAACCTTTTGTAGAGCTTAGAAGGAGCATGAATCCTCGTCAAACTGGAGCTTCACG AAATCTAGTAAGTTACACTATTATATTCTGAAACCGGTACATAAATATTTTGGTTTCTTTTGTTTACTTTTCCTGAGCTG TGGATTTTATTAAACTTCTACAATAGGATATTCTTGACTTCTGTTTATCTATACTGATGTTGTAGCTAGCTTCAAAAGGA GTTGAGTTTGAGCGAGAAATTCTTGAGGCAGAGCTTTCTCTAATTAATGATAAAGTTTCACAGCTACAGGAAAAGGTAAG CTTTTAAATTTGTGCACTGAGCTATTTTTGCATCTTTTTCTTTGAAGAGCTATGACATTTCACATGTATTGTATTTCATG ATTTTCAGTAGTTTGTGTAGAATTGTCTACCTAGAAATCTGGTGTCCCTCTTTTACACTCGCCATATTAAACTAGTATAC AACCCATTCCAATACATCATATAATATTTTAGCAATTGGTTTTTTTTTGGGTCATGCACTCATGCAGTTGGATATTATTC AAAGTTTTAAACCAGTATTATAATGCTTTGCAAGAACCAATTAGGATAGGATATTGATGCGGCTAGAAGGCCCTAAAATG CATAAGAGGTCATTATTGGCCCGTTCCGCTAAAGATTGGCTTGACTCTTCATCTTATAGTGGTTTCTATTGGTATCTTAT TCTTGTAATTAGATATCAATATGCTTATGTAAAAAGTTTCCATTCTCATGTGACATAAATATATATATATATATATGTAT ATATATGTATATATATATATTATGTATATATATATATATTATGTGCTTTAAATATTAATATGATTTTGCGTAAGATTAAA CTCCACTGTGTTTTGCATTGGACCTATCAAATTAATGACCCATATGACTTCCATTGGGCATTGGCTATGAAATTATTGCA TGTTCTTGTACATTACAGGCTAGGAAGCTGGAAGCTGACATTGAAATGACCAGGAAGGAGATAGAACAACCAACAGAAGT TGAAGTTGAGCTCAAGCGAAGGCTTCATCAAATGACTGATCACTTGATACAGAAACAAGCCAAGGTGTGTCTTCATACAT CCCATTGGCTGTAAATTTTATGCAAATGCTCATGAGTTACTGTTTTAGTTCAGACTGGACCAGCCAGTCTGGTCAGTCCT ACTGGTTATCAAACCAAAATGACCAACAAAACTGGATCTGGTTTTCAGAATCCAGCAGGTTAAAGTACAAACAATTATTT TGTAAAAAAATAATTAATAATCAAATAAAGAACTGGGGCTTTACTTAATGTCTTTTTTCAGACACCTATATCTATTCAAC AGTTTATTCTTATCAACAGGTTGAATCTCTCTCTTCTGAGAAGGCGAGTCTTCAATTCAGAATTGAGGTATGTTTTTTTA CAGAGGCTATGATGTTAATTCTCGGAATCACGATATAGACATATAGTTGATTTAAATTTTCATAATTAACCCTGCAGGCA GTATCAAGGCTGCTTGATGAGAACATGTCAGCATCAGGCTCAACAGCTATGAATCCTGCCTCATCATCAAGTGATGTAGA ATCAGGAATATGGGAGCTCTCAAACTCAAAGTTGAAGCCTATGCTGAAAGCCAGAATTCATTCTGGCAAGAGACAGCTGG GGTACTTGCTTCAACAATTAGATTATATTTTCGTGGCTGGTGCTGTTTTTTTGAAACGGAATCCAACAGCTAAATTATGG GCTATGATTTACCTTGTTTGCCTTCATTTGTGGGTGATTTATATTCTAACATCACATTCTGGTCCATCAAATGAGGGTAG ATCTGGTGCCGTGATCTCATTGGAGAACATTAATAACACCGGAGGAGTATGATTGTGTTGTGATGTGTCACCACTTATAT AATTTGCCTCAGCTTTTAGGAGGTGTTCATTACATTTGATATAGTTTGTTACTCCAGGGTACATCAGGGACTCCATCACA GAGTAGCAATGCCCTGCAATATATATTTTTTTTTTGAAAAATGGGTGATTTGGGTTTAAATTTTGATGCTCTGGTCAAAT GATGAGTATTGTTTGTAAAGATTTGTTCAAGTAATACGTAATTTGTATGTACAGAGTAAGTGTAGCAACAGGCGCAATAA CAGGATGAGCCTCTAGTCATTGGCTTGTAGAGGCGAAATGCAGTTTCATGATTATTATGTCTTGAACTTGTAGAGAAAGG GAAAAGAGGTTCACTTCAGGTGCATTCAATTATTAATAAATATTCATTCATTTCTGTAATGCATTGAAATCTTACTCGAT CACATTTCATGATTAAATCATATCATCTCCTCTTAGATTTTAT
CDS sequence (LotjaGi4g1v0463500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAATTGGATCTCCTCCAAACTCAAAGCCGCAGAGAACATTCTCCATCAGATCGATCAGCAAGCAGCCGAATCGCT TCGGAAGAACGAGAAGCTTCGATCCGACGAACTCGGCATTCATGATGCTCCTGCAGCCAAATCAGGGAGCGTCGTCTCTC TCAAGAATCAATTGAAGAAGAAACCCTCCGAAAACAATGACTATCATGGTAAACTGCACAGTGACCCCAATTTTACAACT GCACCCAAATCTAGCCCTACCCCTACCCTCGCAGATGCTGATTGGACTCAACTCCTCAGCTCACCTACTCACTCTATAGC TTCTGCTTCTGGAGGGGATCACGGTAATGGGGCTCGTGGTTTCAACAAAAATGGTAGGAAGCACAAGGATTTATTGCTTT CGGATGTAAAGAGGAATCACAAAACCGGTACCAGTGGTTCAAGGTCTTTGCAGAGGTTAAACTCTGTCAAATTGACTAGA AAAACTAGTGACGATGGGATGGGCTTTACCTCAGAGAGGCATTCAACTGATGGTAAACCTTTGGTTGAGAAGAATGATAA AGCAAATCAACAACACCAGCACACTTTTAATTATAGGGATATTTCTCCACCAGAATCTCTGCAGGAAGACAACAAAACTT TGCCAATGCCCGTGTCTGACCTTGATAATGCTAAGATTGCACCAGATGTTGTTCCTGGTCAGCTTAGAGGTGCAATGAAA GCGAGGCATGGGCTTAATTCACTTTCTGGAAATTCAAAATCTGATGATTTCAAAAGGGGTTCTTCCATCAGTGATGGAAG TTCTGAGTCAGATACAGATTCCGGTTCATCGTATGATTCTGAAAGTGAACATGAGAGGGAGGAAAGGAGAAAGAAGAGGG AAAGGGTCCTGGCGGAGAAAGCAGCAGCTATAGCAATAAATGCTATCAGGGAAAAGGAGAATATGGTGGCCAAATTAGAA GGCGAGAAACAAAGTCTAGAGAAAATACTTGAAGAGCGAGCTTATCAACAAGCCCAAGAGGCTTCACAGCTTCAGAACAC TACGATGGAAACAATGGAAGCTGTTGAGTTAGAAAAGCAGAAACATAATAATACTAGAATGGAAGTTCTTGCACGTTTAG CGAAACTGGAGACTGTTAATGCTGATCTTGCACGATCCCTTGCAGCTGTGCAGTGTAACCTTGAAGTCGAGGTTAAACAA GTGGCAGAACTCAGACAGAAGATTGTATCAAAAGAGTTTGTTCATGAAGAGCTTAGAAGGAGCATGAATCCTCGTCAAAC TGGAGCTTCACGAAATCTACTAGCTTCAAAAGGAGTTGAGTTTGAGCGAGAAATTCTTGAGGCAGAGCTTTCTCTAATTA ATGATAAAGTTTCACAGCTACAGGAAAAGGCTAGGAAGCTGGAAGCTGACATTGAAATGACCAGGAAGGAGATAGAACAA CCAACAGAAGTTGAAGTTGAGCTCAAGCGAAGGCTTCATCAAATGACTGATCACTTGATACAGAAACAAGCCAAGGTTGA ATCTCTCTCTTCTGAGAAGGCGAGTCTTCAATTCAGAATTGAGGCAGTATCAAGGCTGCTTGATGAGAACATGTCAGCAT CAGGCTCAACAGCTATGAATCCTGCCTCATCATCAAGTGATGTAGAATCAGGAATATGGGAGCTCTCAAACTCAAAGTTG AAGCCTATGCTGAAAGCCAGAATTCATTCTGGCAAGAGACAGCTGGGGTACTTGCTTCAACAATTAGATTATATTTTCGT GGCTGGTGCTGTTTTTTTGAAACGGAATCCAACAGCTAAATTATGGGCTATGATTTACCTTGTTTGCCTTCATTTGTGGG TGATTTATATTCTAACATCACATTCTGGTCCATCAAATGAGGGTAGATCTGGTGCCGTGATCTCATTGGAGAACATTAAT AACACCGGAGGAGTATGA
Protein sequence (LotjaGi4g1v0463500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANWISSKLKAAENILHQIDQQAAESLRKNEKLRSDELGIHDAPAAKSGSVVSLKNQLKKKPSENNDYHGKLHSDPNFTT APKSSPTPTLADADWTQLLSSPTHSIASASGGDHGNGARGFNKNGRKHKDLLLSDVKRNHKTGTSGSRSLQRLNSVKLTR KTSDDGMGFTSERHSTDGKPLVEKNDKANQQHQHTFNYRDISPPESLQEDNKTLPMPVSDLDNAKIAPDVVPGQLRGAMK ARHGLNSLSGNSKSDDFKRGSSISDGSSESDTDSGSSYDSESEHEREERRKKRERVLAEKAAAIAINAIREKENMVAKLE GEKQSLEKILEERAYQQAQEASQLQNTTMETMEAVELEKQKHNNTRMEVLARLAKLETVNADLARSLAAVQCNLEVEVKQ VAELRQKIVSKEFVHEELRRSMNPRQTGASRNLLASKGVEFEREILEAELSLINDKVSQLQEKARKLEADIEMTRKEIEQ PTEVEVELKRRLHQMTDHLIQKQAKVESLSSEKASLQFRIEAVSRLLDENMSASGSTAMNPASSSSDVESGIWELSNSKL KPMLKARIHSGKRQLGYLLQQLDYIFVAGAVFLKRNPTAKLWAMIYLVCLHLWVIYILTSHSGPSNEGRSGAVISLENIN NTGGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 574 | 574 | - | – | |
| PANTHER | 1 | 626 | 626 | 9.5E-166 | ||
| PANTHER | 1 | 626 | 626 | 9.5E-166 | – | |
| Coils | 9 | 36 | 28 | - | – | |
| MobiDBLite | 38 | 91 | 54 | - | – | |
| MobiDBLite | 77 | 91 | 15 | - | – | |
| MobiDBLite | 103 | 182 | 80 | - | – | |
| MobiDBLite | 123 | 137 | 15 | - | – | |
| MobiDBLite | 138 | 165 | 28 | - | – | |
| MobiDBLite | 166 | 182 | 17 | - | – | |
| MobiDBLite | 195 | 213 | 19 | - | – | |
| MobiDBLite | 195 | 224 | 30 | - | – | |
| MobiDBLite | 244 | 295 | 52 | - | – | |
| MobiDBLite | 245 | 275 | 31 | - | – | |
| MobiDBLite | 277 | 295 | 19 | - | – | |
| Coils | 302 | 332 | 31 | - | – | |
| Coils | 387 | 407 | 21 | - | – | |
| Pfam | 440 | 619 | 180 | 4.5E-24 | ||
| Coils | 443 | 477 | 35 | - | – | |
| Phobius | 575 | 593 | 19 | - | – | |
| Phobius | 594 | 598 | 5 | - | – | |
| Phobius | 599 | 619 | 21 | - | – | |
| Phobius | 620 | 645 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Golgi organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. |
Expression pattern of LotjaGi4g1v0463500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…