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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0464000 |
| Transcript ID | LotjaGi4g1v0464000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT1G17930.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9LMT7|MAIN_ARATH Protein MAINTENANCE OF MERISTEMS; TrEMBL-Plants: tr|A0A0L9UUK1|A0A0L9UUK1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0464000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83407829..83409421) extracted from Lotus japonicus Gifu genome v1.2.
CTATTATTATTGTATTGTTATAAACTATTAACTTAATTCACTTCATTGTAGAGCACCGATATGAGGACGCTGCACGGATT TGGCTGGTGAACCAGCTAGGCGCCACGCTCTTTGCTAGCAAGAGCGGAGGCTACCATACGACCGTCTACTGGATAGGGAT GTTGGAGGATCTTGGTCGAGTGTGCGAGTACGCGTGGGGCGCGATTGCGCTCGCTACGCTATACGACCAGCTTAGTCGAG CGTCCAGGAGGGGGACGGCCCAGATGGGAGGTTTTAGCTCGCTCCTGCTAGAATGGGTCTACGAGTACCTTTCTGACCGC GTCATTATCCGTAGGGCGGATCCGGAGTACTCGCAAGACCAGCCTAGGGCGCGGCGGTGGGCTATGTCCCGGGTCGGGCA TGCAGGCCTTGATGAGAGGCGAGTCATGCTCGATGAGCTGACGGTGGATGACATTATATGGACCCCATTTGAGGACCATC GGGCTCATCGACCACGGGATCCGAGGGCCATGTATTCTCGCTACATCCGGTCGCCATTTGGCCGTGTTGTTCGACGGCAT CTACCAGAGAGGGTTCTGCGCCAGTTTGGCTTCATACAGGATGTCCCTCGACACCCCTCTGAGATCCAGACGTCTGGGTC CCTTGCTGAGACCGCAGATGCTGCCTTTGCTGAGTTTGCGCCGCACCTTCGCCCTCAGGGGATCCCCGCTACATATCCGG GAGAGGCTGTGGAGGATTACATGAGGTGGTACAGCGCTGTGTCCCATCGGTTCATCATCCCTGATGATAGGAGGGAGGAG TTCAGTGCGGTGGTAAGTTTGAATTTTATTTTCCATTCAATTGTGATTTTTTGTTCATGATATTTGTATATTTGTATCTA ATGTATCTACATTATTTTTGCAGACTGTTATGCGTCGGGCCGTGGACTTGTTGGAGCAGTCACTCGAGGTGTCAGATGCT CCTGCAGAGGGCACGCATTCCCGATCCCTCACTGAGAGGGCGCTGGATCTTATTAGATCCAATGCCTTCATTGGTACCCA GGGGGTAGCCTTTGCTGCTGTCCGAGGAGCTAGAGCTGCAGGAGGCAGAGGTCGTGGAGACAGAGCGCGTGGAGGCAGAG GCCGTGGAGAGGGTGCTCCTGCAGAGGGTGCACGTGGAGGCAGAGCCCGTGGACCTAGAGGTCGTAGAGGGGCCGGTAGG GGTCGGGGCGAGTGATTGACTGTATATTTGTATATTTGTATATAAATCTGAGATATGGTAGTCAAGTTTGAAGGATTGTT TTCCTTCAAAGTCAACAACATCTTTCTCGGTGGAACCCAACTCCTTGTCATTTTTTCCACTTGCTCCTTCTCTCCGGGTT TTAGACGACCAACAAAATTGTGCCCAAGTAGTGACCTAGCTGGTTCATGGTTGTGTATACCTTCCATCACCTTTAGCCGC CAATCTCTATCTATGTCATTTTTCCTAGGTCGTCCTTTTAGTCTAAAAGGACAACCTGTCTTTTGTGATCTCGTCCCTTC AACAAGGTCAGGGTCTCTATAAGGAACATATTTACCATGCTTCTCGCACCCCAACATGACATAAGCTTTTCTG
CDS sequence (LotjaGi4g1v0464000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGAGGATCTTGGTCGAGTGTGCGAGTACGCGTGGGGCGCGATTGCGCTCGCTACGCTATACGACCAGCTTAGTCG AGCGTCCAGGAGGGGGACGGCCCAGATGGGAGGTTTTAGCTCGCTCCTGCTAGAATGGGTCTACGAGTACCTTTCTGACC GCGTCATTATCCGTAGGGCGGATCCGGAGTACTCGCAAGACCAGCCTAGGGCGCGGCGGTGGGCTATGTCCCGGGTCGGG CATGCAGGCCTTGATGAGAGGCGAGTCATGCTCGATGAGCTGACGGTGGATGACATTATATGGACCCCATTTGAGGACCA TCGGGCTCATCGACCACGGGATCCGAGGGCCATGTATTCTCGCTACATCCGGTCGCCATTTGGCCGTGTTGTTCGACGGC ATCTACCAGAGAGGGTTCTGCGCCAGTTTGGCTTCATACAGGATGTCCCTCGACACCCCTCTGAGATCCAGACGTCTGGG TCCCTTGCTGAGACCGCAGATGCTGCCTTTGCTGAGTTTGCGCCGCACCTTCGCCCTCAGGGGATCCCCGCTACATATCC GGGAGAGGCTGTGGAGGATTACATGAGGTGGTACAGCGCTGTGTCCCATCGGTTCATCATCCCTGATGATAGGAGGGAGG AGTTCAGTGCGGTGGTAAGTTTGAATTTTATTTTCCATTCAATTGTGATTTTTTGTTCATGA
Protein sequence (LotjaGi4g1v0464000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEDLGRVCEYAWGAIALATLYDQLSRASRRGTAQMGGFSSLLLEWVYEYLSDRVIIRRADPEYSQDQPRARRWAMSRVG HAGLDERRVMLDELTVDDIIWTPFEDHRAHRPRDPRAMYSRYIRSPFGRVVRRHLPERVLRQFGFIQDVPRHPSEIQTSG SLAETADAAFAEFAPHLRPQGIPATYPGEAVEDYMRWYSAVSHRFIIPDDRREEFSAVVSLNFIFHSIVIFCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 198 | 198 | 1.2E-24 | ||
| PANTHER | 2 | 207 | 206 | 5.8E-18 | – | |
| PANTHER | 2 | 207 | 206 | 5.8E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0464000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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