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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0000300 |
| Transcript ID | LotjaGi5g1v0000300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter-related family protein; TAIR: AT1G21070.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2; TrEMBL-Plants: tr|I1LFM6|I1LFM6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0000300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:69335..77172) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAAATAAGATGTAGTAGAAAGATAGGTCCATGTGATGCAATGTGAGTTGAGTAATTTGATTTAATTTTATATATAT TTTTAGTGATTTAGATTTAGAGAGGTGGCAGCGAAGACGCAGAAGAAGACAATAATAATAATGTGAAGGTGAGGGAAGGA ACCGGGAAGTGTTGTGGGAGGAGAGACTGATAGAAAGAAAGGCCAGGAGCGGAGTAAAGTGTTAAATCGGGAAAAGCTCC TCCCTCACAGACACAGATTTCTTTATTATTATTCTCTTTGAGTCATCTCCTCTCCTCTGTTCCCTTTCTTTCACTTTCCC AGTCCAGTCGACACAGACAGGTTCAAGTGTTTAAATTGAATTTGAATTCTGAAAATCAAATTTTCTTCCTCAGATTCGAT TCAGATTCAGATTCAGATCTCCCCGGAAGATGGAGAGCGAAAAGAAATCGTCGGCAATATCTGATGTGGGAGCATGGGCT ATGAACATTGTCAGCTCCGTTGGAATTATCATGGCTAATAAACAGCTCATGTCCAACAATGGCTATGCTTTCAGCTTCGG TCAGTCAGTCTTCTCAACTCTTTCTTTCTTTTTTTTTAATCTACAATTAAAGTGATAGATCTGCTCTAACATCACTATCA GATCTCTTTCTTTCTTTCTTTCATTCAGCCAGATCCAAATGTTTATAATATTTTTTCTCATTCAGCAAATTGATTTATGT TATTTGTCGTATTTGGTATTGTTATATAAGTGACAAATTATGTTCATGTCTTGCTATTTTTTCCAGCTACTACATTGACT GGGTTCCACTTTGCTGTAACTGCTCTCGTGGGTCTAGTGTCAAATGCTACCGGTTATTCTGCGTCAAAGCATGTTCCTTT GTGGGAGCTTCTTTGGTTCTCAGCGATTGCCAATGTGTCTATCACGGGGATGAACCTCAGCCTCATGCTCAACTCTGTTG GATTCTACCAAGTATGACCATTTCTGCCCCTATTCATATATCATCATCATGTTCAATCCTGCTTTCTTTCCTTTTAGTTA AGAATTTCTACCGTCTAATTTTCATTTGTATATAAGTCTACTTTACTTAATTCTGTCTAAATCACAACTCTCTACCTAAT TTACACTTCACAATGGTTGATGAGCACTGCATATTGCAAACATATTAGGTAGGAAAGTTTTGAGAATTTGATCTCACCAT ATGAATAGTCAAGATTAAAACATAAAATCATGCGTCTTTTCTAAAGAGCCATGTGACCATTAAATGACTTCCAATCTTAA TCATCCATATATGGTTGTATAGTTTGTTAACATTTACTCCTCTCACTTTTATCTAAAAAGACACTCTCAATAGATACATC CCCTTGATCGGTAGATAAGAACTTGAGATAAATGAATGGATATATGTGACAAGAATTAGAACAAGATGGAGTAGCACCAA ATACTTATTCAAGATAAATATGGATCAAATGGAAGATAAGTTGATTAAAACACAAGGTTCAAATTTAGGGGAAATCTTTA GAAAAAGCTTACTAACTGGAGGAGTTATTGAAAACTTGGTTTCTGGTAAAGCCTGGTGGTGCCTTTTGAATCATGTAGCT GAGCTCAATTACTATTGGTATCAGGGTTGGTCCTTATGTGGATCCATTATTAAAAGCTTACCCAAAGAATGTGACAGGAA TTCCATATTAAATCTTTGTATGATTGTACATAGGTGCTTGTATATTTTGAATTTCGATATACCTTTGTTGAGCTATAATG AGATGTTTCCAAGTCTATATGCCTTACCATTTGACATCTGCAATTGTGATTGGTGATGTCAACCTTTACATTATTAGTAC CCAAAAAGATACTTATTAATACATGTAAGAAATACCAATTCGAGTTTTGTGAGTACAAAAATTTAATGATAAAATTTACA TCTTGAAGAGTGCTTGGCAACCTATGTAGGCAATGGAGGTTAACTAAGGCATTTTGTTAGAGTATGCCCTCAGGAATACT TTTTCAAGTTTAATTAATATTGCACTCCTCATTATCTAGTAGTGATTTCAAATTGAGCTCAACTCTTCATCTTAGAGACA CATGTAGTATTGATTAATATATCTCAATATATAAATATTGGGATCTGTGGAACACTCAAATGTGCTAAGCTCTAACTTTT GAATGACCCAACTTGTGTTTTCATTTTGAATTTTCATTTCCTCTATTTTTAAGTTGTTAACTTTCTCATTGTATATGTAA ATAGATATCAAAACTAAGCATGATTCCGGTGGTCTGTGTGATGGAATGGATCCTTCACAGCAAGAACTACTCAAGGGAAG TGAAAATGTCAGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAAAGTCAACCTCAAAGGTTTC GTGTGTGCCTGCCTAGCAATTTTGTCAACATCTTTACAGCAAATTGTAAGTATTATTTAATGTTTCTGCTCTGCCATGTA GGTAAAATGGAATTCATTTCAATTTTTGTTGTCATTTCCTTTTTTCCATCGCATTTTAGTGTTTCCTTAGGCTCATCTGG GATATTTTCATTCTTGTCCTTTTATGTATTACGAATTGGAGAAAGTGAAGTTGAGTGCTAGATGGAGCATATATAAATGT AGAATCATGACAGAAAGCATCATTTTTGTTTTTTTTGAAGGTCTCAAATTATGTTTTACTGATAGAAACCTGATTTTTAT TGATAGAAAACCCTAATTCCCAATTGGAAACTAGGGAGAGATACAAGAGAAAGGGATGCCAAACACCCTTCCAAGCCTAA GAGAGAACCACTTCTCTCTCTAACCCAATTCCTAAACTGAATAACAAGATGATCAATGTTTTCTAACCCCCTCTTATTTA CAGGCACAAGCCTAACTAACCCTCTAACTAACTATCTAACTATGTAATAAGTCCCTCACTTAACTAACTAAACCATGTCA TATGTGAGTACCTAACAATACTCCCCCCCTGAAAATTCACCTTGTCCTCAAGGTGAAGGACAAAATACAAGCTACAACAT GGAACAACTATCCAAGCAATCCAAATGTGGCAAGCACAGCCTCCACCAGGATCCCTTTGCTCGTCTTCATTGTTCACATT TGTAGTCAACTCTAAAGATTCAGAAAAAGCTTGAAAGTCACCCAAATCTCCCTAACATAGCATTTTGCTGCCTCATTGCC ACCTGGATCCCACTGGCATAAGCACCAGCACAAAATCCAAGCCGTGTTAGTATTGGAAAACATCTTCACTAGGCTGCTGA AACTAATGTTGCCTAAGTCCCAAGGCCGGAAAAACGATTTGCAGAAGAGCCAGTTGATGCAAACCGGGTAAAATAGCACT GGAACAGCATCTTCAAAAGCAAATCCAGGCATGAATGAATTGGTAGACATCTTCCCATTACCAGCCCACAAGTTCTCAAA TTGACCAATACTTGAATCAGCACTATAAATCAACCCTTTACTACCATGTGACTCAAGTTGTGAAAATGTCCAACTATCAC AAATATGTTGATACCCCCAATTCTGTTTTTGCCTCCAAACCAAAACATTGAACTCAGTACTGTGAGAGCCCAAGCTTTGA AAACTAGCATCTAAATCGATGGAAGCATTTGATTGACAGGGCATAGTAGCACTTGGTTACCTATGAATTAAAAGTTCTGG AACTGTATACCTCTCCAACCTATAGTTTTGCTCCCTTTGTAAAAAGTCAGCCATGTATGATGTGTTGAGCCAATCCCTGG AACAGCTGAAATAAATTCTGGTGTGGTCCCTTAACCGTTGAAGTATCAAGCTAGCAAAATTTTCAAAAACTAGCCACCCC AAACTAAATACCCAAAGCCATATTTATACACAGTACGAGTATCAGCTTGAAAAGTGTGAAGACATCCAAGGAATGCAATG TGGCCACCAATCTGCTGAATTTGGCACATAAAATCCAAATCATTCTTGGCTTTTACTACCGCTCCAGCCCCTTTTCAAAT TTGGGCTTGACCCACCCTTTCCCTTCCTCTAATGTACCGTAGCAGTTGGCCTAAACTCATGTAAATCCTTCCATCCTGGA ACCTGTCACTGGCTGGGACATGTGTCCACTCCACAACCTCAGAAAATTTATCTTTAACTCTATTATTTCCCAAGTCTAAC GCGTGTTTCTCTCCTCTATCAACAGGAAGTAAAAACTGGTAAAACAACTTTGTGTTGAAAGATCTCCACTTACCTCATGG GCAATTTTGGTCAAACAGTTGACCCCAAAGTGATTCCAGTTATGCCCTCATCTTCCCTTACTCTTCTTAGTGTGTGATCG TGTTTCTCCATCATCTCACAACTCGACTCATGTTGCGGCGCAAAGTCACGACCGTCGACACCTCACAAGGCCGGCAGCTT CGCCAGTGACCAATTCGCCTTTTCCGGTCCGCAAGGATGCTGGTTCAACAACTCGATCCACCCAATTAACGACCCTCCCG CATGCAACACTCTCACCCTGATGTGCGGTGGTTTCGGTGGTGGCCGTTTAAGCGATTGCATCTTCTGTGGATGTCGGAGC TCCGCCGCTGGCGACACCTTGGCCCTTCCTCTTGTTAGCGCCGATGGCGGTTGGTGATTGCGTTTCTCCATCACCTTCAG TAGTTGATGGATCTTTTGTCGTCGACTCAGTCGGTGTCCAATCGTCTTCCCATCACCTCTTATTTCATCCATCGCTTCAA GATTGAATTGAGGCACCGTGGATTTCAGCGATTCCTTCCCCCTTTGATCCAACGTCACCCCCTGCATCTGAAATGATAAT TTTTTCTTCATCTCCATGTGCGATTGTGGATGTCTCTGAGATTCTTGACCCAAAATGTTGTTGTTTCCGTTCTTGAAAGC TTCATTCTTGCTTCCGATTTCTGTTTCTCCTTCCTTCTGGACCACCACCACCTCTGCAATTCAATTCCTGATTTCCCTTG AGTTGCACCACCGTGGTTGATGCTCGCTCTTCCTCCCCTGTCAATTTCGTTACCCTCAGCAGCGCTACCACTGCCGTTGT TCGTCCCGCCTTGATTGTCGCCTCTGTTTCCTCTGATGCCGCCTCAGATCCTCTGCTACTTCAAATTCGCGCTTTTCCCG TTCCCTCTGTTTTCTCCGCTCTTCGAGTTCTCGCAAGCGGTTCTCTAATCTTAAGATTTCTTTCTCAAGTTCAGGGTTTG CAACGAATTGCACCCCCAATTTCTTCTCAAACGCTGCAAGTTGTAACTCGTTCGTCGCGGCCCTAGCTTCAACCGACTCC ATTCTGGCCCTAAGTTCTTTGCGATCCTGCTCCATCGAACACAGCATAGGGAAATCGTGGTTCAGGCACCAAATCAGTGC TCTGATACCAATTGATAACCTTGGGAGAATCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAACCCAAGGCCTTATAAA CCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATTGGGTCCTAACATCCCACCACGCT CCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCTTGACTAGTCCCGGGCAAACACTGCAATGTCGGCATC ACCACCCGCGCCACGTTACCAATGATAGAAACCAGAAATTGTAGATGAATTATTGAAGAACCCTAATCCCTAATTTGGGA ATTAGAGCAAGTTACATGAAAGAGATGCCAAACACTCTTCCAAAACCTAGAGAGAAAGCCAATGCTCTCACTAAACCCCA ATTCCAACAGAATACCAAAGAGGATCAATGTTCTCTAACCCCCTCTTATTTATCGGCACGAGCCTAACTAACCCTCTAAC TAACTATCTAACTATGTAATAAGTCCCTCACTTAACTAACTAAACCATGTCATATGTGAGTACCTAACAAATTCCCGTGA ATGTTCATGGTAGATCAGATAGATTTCATTGTTAAACAAGAGTTCAAAACATACTTTCTAACCATGATAAAAACTTTATA CGAAATTAACTGGTTTGGCCACAGACCTAGTGATCCAATCTATTCAACCCTAAAAATTTGGTTGACCAAAGAACTAGTGA TAACTGTTACAAAACTGGTGAAAACCAGTGTTGATCCAGTAGTTTTATTTTTAATTACTCTTTTAATATTTTTAACTCGA TCAAAAAAGATTTCAGTCATATAGAGACCCTGTCAAGTTACAAAAGCCTACAAATGTGTTGTTATTGTTTAGCTTCTTTT TTTTAATCTTGTAAGACATAATATGGTCGTTTATATTAATTTAAAATTTTAACTCCCTTGATTTTTTATAACTTTATGTT AGTTTATGACTTAATATATGAAATCATATTAAAAGTCATTGATTAACCATGGCCTAATTAATGAATTGTTAATTACTACT TCAATAACCAGCGCAAGTTTTAAATTATTACTTTTACTGTAAAAGGTATTTCTTGTGCTATATGCTTGTAACTACGACAT TTGTAGGATTGCTTCTTTTTTATGCCTGATTATATTTTGCCCTTTGTTGTGACAGTCAATTGGTTCTCTACAAAAGAAAT ATTCGATTGGATCTTTTGAATTGTTGAGTAAAACTGCTCCTATTCAAGCCGTCTCTCTTCTAGTTCTTGGTCCATTTATT GATTACTACCTTAGCGCCAAGTTGATAACCAACTATAAAATGTCTTCCGGTGCCATTGTAAGTGATCATCAATTTCCCTG TTGAATCTAGTTTTTTCTCTCTGTATTTGTTAATAATAATTATAATATTGTGTTGTGTGGTTTATTTAGTGTCTTTGTAA ATCTCTGCAGTTATTCATTCTTCTTTCGTGCACCCTAGCTGTATTTTGCAATGTGAGTCAGTACCTTTGCATTGGGCGCT TCTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACAGTTTGTGTTCTCACGTTGGGGTGGTTGCTATTTGATTCA GAGCTAACTTTCAAGAATATCATGGGAATGGTTCTTGCAGTTGTTGGCATGGTAATTTATAGTTGGGCTGTGGAGGTTGA AAAGCAGTCAAACGCCAAGACTCTTCCTCATTCGAAAAACAGCCTAACGGAAGAAGAAATAAGACTATTGAAGGCTGGAG TAGAAAACAACCCGTTGAAGGATGTTGAACTTGGTGAGGCCAAAGGTTAGATTGATGAGAAGGGATAGTCTCCATTTTAA AGTGTACTACTTCAATTTGATTTGTTCCTTTTACTTCACTAAAAGTCGATCGGTGTTTAGGAAATGGGCTCCCGTTCTCT CCCATTAGCAATGTTTCTTTATTTTGATTTTTTTATTTCTTTGTCACGCTCAGTTTATTTATTTTATTTGACTTACCTGT AATGATTGCTAGATGAACAATATGAGGGCGCTATAGATGTATAATGTTTAAGCTGGTGTTGAGAAGCGATTCAATACCCT CCCAGATTTTTTTTTCCGTTTGATTTTAGTTTACATAAATGTAATGCTCTATCTTTGATTAAATGCCTGTTGTAATACTT TTCCGATGTACCAAAAAAAATGCCTGTTGTAATATATGGACATGCCTTTGTATTAGGAAATTGATTTACACCGAGTACGT GGATCACTTGAGTCACTTTTTTATTAACTTCACTTGAGTCACTTTATAGAGGAAAAGTTTTGCTGCCGTCTATAAAGATC TTATTCAATTTGAACAGATCTAAGGGATAAAAACAATATGGATTTTGGTTAACTTCATTCGGGTACACCATTTGGGGGTA CAAGATTCTTATTCTACATTGTGCCATAGTTGTTCCAGGAAAATGTCTTTTTTTTCATGCCTTTAAGGTAGTGTGAGG
CDS sequence (LotjaGi5g1v0000300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCGAAAAGAAATCGTCGGCAATATCTGATGTGGGAGCATGGGCTATGAACATTGTCAGCTCCGTTGGAATTAT CATGGCTAATAAACAGCTCATGTCCAACAATGGCTATGCTTTCAGCTTCGCTACTACATTGACTGGGTTCCACTTTGCTG TAACTGCTCTCGTGGGTCTAGTGTCAAATGCTACCGGTTATTCTGCGTCAAAGCATGTTCCTTTGTGGGAGCTTCTTTGG TTCTCAGCGATTGCCAATGTGTCTATCACGGGGATGAACCTCAGCCTCATGCTCAACTCTGTTGGATTCTACCAAATATC AAAACTAAGCATGATTCCGGTGGTCTGTGTGATGGAATGGATCCTTCACAGCAAGAACTACTCAAGGGAAGTGAAAATGT CAGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAAAGTCAACCTCAAAGGTTTCGTGTGTGCC TGCCTAGCAATTTTGTCAACATCTTTACAGCAAATTTCAATTGGTTCTCTACAAAAGAAATATTCGATTGGATCTTTTGA ATTGTTGAGTAAAACTGCTCCTATTCAAGCCGTCTCTCTTCTAGTTCTTGGTCCATTTATTGATTACTACCTTAGCGCCA AGTTGATAACCAACTATAAAATGTCTTCCGGTGCCATTTTATTCATTCTTCTTTCGTGCACCCTAGCTGTATTTTGCAAT GTGAGTCAGTACCTTTGCATTGGGCGCTTCTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACAGTTTGTGTTCT CACGTTGGGGTGGTTGCTATTTGATTCAGAGCTAACTTTCAAGAATATCATGGGAATGGTTCTTGCAGTTGTTGGCATGG TAATTTATAGTTGGGCTGTGGAGGTTGAAAAGCAGTCAAACGCCAAGACTCTTCCTCATTCGAAAAACAGCCTAACGGAA GAAGAAATAAGACTATTGAAGGCTGGAGTAGAAAACAACCCGTTGAAGGATGTTGAACTTGGTGAGGCCAAAGGTTAG
Protein sequence (LotjaGi5g1v0000300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESEKKSSAISDVGAWAMNIVSSVGIIMANKQLMSNNGYAFSFATTLTGFHFAVTALVGLVSNATGYSASKHVPLWELLW FSAIANVSITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHSKNYSREVKMSVMVVVIGVGVCTVTDVKVNLKGFVCA CLAILSTSLQQISIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFIDYYLSAKLITNYKMSSGAILFILLSCTLAVFCN VSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVLAVVGMVIYSWAVEVEKQSNAKTLPHSKNSLTE EEIRLLKAGVENNPLKDVELGEAKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 6 | 332 | 327 | 5.2E-194 | – | |
| PANTHER | 6 | 332 | 327 | 5.2E-194 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 9 | 29 | 21 | - | – | |
| Pfam | 23 | 297 | 275 | 1.8E-18 | ||
| Phobius | 30 | 40 | 11 | - | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 41 | 61 | 21 | - | – | |
| Phobius | 62 | 72 | 11 | - | – | |
| Phobius | 73 | 96 | 24 | - | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 102 | 122 | 21 | - | – | |
| Phobius | 123 | 130 | 8 | - | – | |
| Phobius | 131 | 148 | 18 | - | – | |
| Phobius | 149 | 153 | 5 | - | – | |
| Phobius | 154 | 172 | 19 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| TMHMM | 188 | 210 | 23 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| SUPERFAMILY | 221 | 298 | 78 | 2.35E-6 | – | |
| Phobius | 223 | 241 | 19 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| Phobius | 242 | 252 | 11 | - | – | |
| TMHMM | 252 | 274 | 23 | - | – | |
| Phobius | 253 | 274 | 22 | - | – | |
| Phobius | 275 | 279 | 5 | - | – | |
| TMHMM | 278 | 300 | 23 | - | – | |
| Phobius | 280 | 299 | 20 | - | – | |
| Phobius | 300 | 345 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0000300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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