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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0008100 |
| Transcript ID | LotjaGi5g1v0008100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G27230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q940J9|PMT8_ARATH Probable methyltransferase PMT8; TrEMBL-Plants: tr|I1MC57|I1MC57_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0008100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1787673..1790014) extracted from Lotus japonicus Gifu genome v1.2.
ATTCAAGTGTGAATGTTACTTAACCCTTAAATAATTGACAGGGCACTACATCTATTAACTACACAATAGTAAAGTCACAT GGAAAATTTCACAAGCACAACCGACAAGGTTCGATTTGGGTTTGGTTGTCTCTGAAACTTAGCTTTTTTCTAACTCACTC CACATCCAATTCACTTCCACTTGCCACACTGCAAATCTCACTCTCACTGATTCACTGATTCTCAACTCTCTCTCTCTCTG TGTGTTTGTTCACCAGAGCAGAACCAAGATGGGTTCTGTTTCTCTGAAAATAGGAGATGGAACAGCCAGATTCAAAAGAG CAACTCTGTGTTCTTCAGCTGTCAACATTCTCATGATTTTCTCTGTCATCACCACCAATCTCTTTGCTCTCTATGCTTTC ACTGCTTCACCAAAACCAAATCACCAACTCCTCCACCATGCCCACAAGAACATCTCCATCATCTCAGAGCAGGTCTCACT CATACTCAGAGAGATCGATTTATCTCAGAAGCAACTAGCCCAGATGGAAAAAGAGCTTCTTGGCTACGAAAGCATTGATC TTTCAAGACCCAATATCGCAAACGAGCTCAAAATCTTCCTCCAGCGCCACCAGCTTCCTCTGGGGAAAGATTCAAGAACT GGGATCACTGAAATGGTGCCATCTGTGGGCCACTCCTGTGAGAAATCTTCAGACTTGTTGTCTCAGTACATGAGTTACAA GGCTTCTGGATCTTGCCCTGATGATTGGAGTTTAGCTCAGAAGCTGATTTTAAGAGGGTGTGAGCCTTTGCCAAGAAGAA GGTGTTTTTCTAAAACTGTTTCCAAGGTAGGACTTTCCCCTTTTCCTGATTCTCTTTGGATAAATGTTGGTAACAAGACA GTTAATTGGAGTGGTCTCAATTGTAAGAATTTTGAATGTTTGAATGGAAAAAAATTGAGCAGAGATTGCATTGGTTGCTT TGATTTGGTTAGTAGCAATGAGAATCAGAGATTTGTCAAAGGTAAAAGTAAGAATGATTTTGTGGTTGATGATGTCTTAG CATTGGGGAGTGGTGGAATTAGAATAGGGCTTGACATTGGTGGAGGGTCTGGATCCTTTGCTGCTAGGATGGCTGATAGG AATGTTACTGTAATTACTAACACTCTGAACATTGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTCCCACT TTACTTGAGCTTGGATCATAGGTTCCCTTTCTATGACAATGTGTTTGATCTGATCCATGCTTCAAGTGCATTGGATGTTG GAGGGAAGCCAGAGAAGTTGGAGTTCTTGATGTTCGACATTGATCGGGTTTTACGCGCCGGTGGTTTGTTATGGCTGGAT AACTTCTTTTGTGCCAATGAAGAGAAGAAACAAGCTTTGACAAGGTTGATTGAAAAGTTTGGATATAAAAAATTGAAGTG GGTTGTGGGAGAGAAGGTTGATAGTTTTGGGTCAGGGAAGCCTCAAGTGGTGTTATCTGCAGTGCTTCAGAAACCTGTTA GAGCTTAAACCTTAGGAGCTTATACAACAAAACAGCAACAAGTTAGAATAATCTTGATTCTGCTATATCTCGTTCGCATT CGCACGTAATTTGTGTGAATGAATTGCTTCCATCATCATCAAATCACCATTGGAATTGGAATAAGTACAAGCATCATTTC CTTGCCAATTGTAAACCAACTTTTTGAGGTGACTTGTATCCTGTATTTTGAAGTTATGTTCCATATCTTATTTTGTGTAC TAGCTGTTCTGTAATTGATCAATTATTAGGAAATGAAAAATGATATTTTTTCTTTGGAAGTTATAGTGTCAATTTAGTCT ATATTTTAAGGTTAGGGCTTTACTTTCTTACTGTGGTGGGTTCAGTCATATGTTTCAAGATTGATGAAATCTACTGATCA TGTCTTTTTATTAGCAGGGTAAGTGCTGCAGGCTATGTACATGTTCTTCTTAATTTCTCTACATATTACTGCCATGTTAG GCACAAACACTGCAAATCTGCAACAATAAGGATTGCTTCACTTCTTAAAGAAATGATCCATTTTCAAATGTCTCTCCATG TACCAAACAAGAATATTATCATTCAAATACTTCCAAGTCCATATTCTCATTGATTCAACTCACTACTCTATACCAAAGAT TCTGATAATAAGTCAACTCACAAGAATGCTGCCTGTCTTGTAATGGAAGATAACTTTATTAAGTGCGTGTTTGGAATTTT TTTTGATAAGCAAGTGCGTGTTTGGATACTAGTTGAGTTAACGAGAAAACACATTCATCATAATTCATAAGAAGAGTTTC GATCTCTTTTTGCCTCAAAGTG
CDS sequence (LotjaGi5g1v0008100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTGTTTCTCTGAAAATAGGAGATGGAACAGCCAGATTCAAAAGAGCAACTCTGTGTTCTTCAGCTGTCAACAT TCTCATGATTTTCTCTGTCATCACCACCAATCTCTTTGCTCTCTATGCTTTCACTGCTTCACCAAAACCAAATCACCAAC TCCTCCACCATGCCCACAAGAACATCTCCATCATCTCAGAGCAGGTCTCACTCATACTCAGAGAGATCGATTTATCTCAG AAGCAACTAGCCCAGATGGAAAAAGAGCTTCTTGGCTACGAAAGCATTGATCTTTCAAGACCCAATATCGCAAACGAGCT CAAAATCTTCCTCCAGCGCCACCAGCTTCCTCTGGGGAAAGATTCAAGAACTGGGATCACTGAAATGGTGCCATCTGTGG GCCACTCCTGTGAGAAATCTTCAGACTTGTTGTCTCAGTACATGAGTTACAAGGCTTCTGGATCTTGCCCTGATGATTGG AGTTTAGCTCAGAAGCTGATTTTAAGAGGGTGTGAGCCTTTGCCAAGAAGAAGGTGTTTTTCTAAAACTGTTTCCAAGGT AGGACTTTCCCCTTTTCCTGATTCTCTTTGGATAAATGTTGGTAACAAGACAGTTAATTGGAGTGGTCTCAATTGTAAGA ATTTTGAATGTTTGAATGGAAAAAAATTGAGCAGAGATTGCATTGGTTGCTTTGATTTGGTTAGTAGCAATGAGAATCAG AGATTTGTCAAAGGTAAAAGTAAGAATGATTTTGTGGTTGATGATGTCTTAGCATTGGGGAGTGGTGGAATTAGAATAGG GCTTGACATTGGTGGAGGGTCTGGATCCTTTGCTGCTAGGATGGCTGATAGGAATGTTACTGTAATTACTAACACTCTGA ACATTGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTCCCACTTTACTTGAGCTTGGATCATAGGTTCCCT TTCTATGACAATGTGTTTGATCTGATCCATGCTTCAAGTGCATTGGATGTTGGAGGGAAGCCAGAGAAGTTGGAGTTCTT GATGTTCGACATTGATCGGGTTTTACGCGCCGGTGGTTTGTTATGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAAGA AACAAGCTTTGACAAGGTTGATTGAAAAGTTTGGATATAAAAAATTGAAGTGGGTTGTGGGAGAGAAGGTTGATAGTTTT GGGTCAGGGAAGCCTCAAGTGGTGTTATCTGCAGTGCTTCAGAAACCTGTTAGAGCTTAA
Protein sequence (LotjaGi5g1v0008100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSVSLKIGDGTARFKRATLCSSAVNILMIFSVITTNLFALYAFTASPKPNHQLLHHAHKNISIISEQVSLILREIDLSQ KQLAQMEKELLGYESIDLSRPNIANELKIFLQRHQLPLGKDSRTGITEMVPSVGHSCEKSSDLLSQYMSYKASGSCPDDW SLAQKLILRGCEPLPRRRCFSKTVSKVGLSPFPDSLWINVGNKTVNWSGLNCKNFECLNGKKLSRDCIGCFDLVSSNENQ RFVKGKSKNDFVVDDVLALGSGGIRIGLDIGGGSGSFAARMADRNVTVITNTLNIDAPFSEFIAARGLFPLYLSLDHRFP FYDNVFDLIHASSALDVGGKPEKLEFLMFDIDRVLRAGGLLWLDNFFCANEEKKQALTRLIEKFGYKKLKWVVGEKVDSF GSGKPQVVLSAVLQKPVRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 418 | 418 | 2.7E-234 | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 1 | 418 | 418 | 2.7E-234 | – | |
| Phobius | 24 | 44 | 21 | - | – | |
| TMHMM | 24 | 46 | 23 | - | – | |
| Phobius | 45 | 419 | 375 | - | – | |
| Coils | 69 | 89 | 21 | - | – | |
| SUPERFAMILY | 221 | 388 | 168 | 1.45E-13 | ||
| Gene3D | 233 | 402 | 170 | 1.5E-10 | – | |
| Pfam | 260 | 363 | 104 | 4.2E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0008100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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