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LotjaGi5g1v0012500.1

Overview

Field Value
Gene ID LotjaGi5g1v0012500
Transcript ID LotjaGi5g1v0012500.1
Lotus japonicus genome version Gifu v1.2
Description Transferase family protein; TAIR: AT1G27620.1 HXXXD-type acyl-transferase family protein; Swiss-Prot: sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase; TrEMBL-Plants: tr|I1K7Q0|I1K7Q0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0012500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:2711495..2716250) extracted from Lotus japonicus Gifu genome v1.2.

CTCATATGGTAGTCTAAACCATTATCCAAACCGTAAACTAGAGAAATGACCCGTCTCTAACCTCACATTCACCTTTTTTT TTTTCAACCAACTCCTCTCCCCACTTCACTAACCTTCTTTCTTTGATTCCTTTTCTCACTTTTCTATATATATCTTCACC TGCCATAGATTGCCATCACTCATCAAACTCACCATCATTATCAACTGCCACTCCAAACTTTGCATACACATCAATTGAAG ACCCACAAATTCATAAGTCGAAAAACATGTTACAATATGTGGAACTCCCTGATTGTTTCTATCCTACACCACCAGTAACA ATCCCCCCAAGTGCTCCAACGCCAAAACAATCTCTCTATCTCTCTAACCTTGACGACCAAAAGTTCCTCAGATTCTCCAT CAAGTACTTGTTCCTCTTCAAGAAATCGGTGAGCTTCGACACGTTGAAGTCCTCTCTGGCTAGAGTTCTGGTGGATTACT ACCCTTTGGCTGGTAGGTTGAGAACCAGCATTGAGGAAGATCACAACAAGCTTGAGGTGGATTGTAATGGAGAAGGTGCA GTTTTTGCTGAGGCTTTCATGGATGCAAGTGCTGAAGAGTTACTTGAATCTTCCAAGTTGCCAAACAAGTCATGGAGAAA GCTCTTGTACAGGGTGGAAGCTCAGAGTTTCTTAGATGTTCCTCCACTTGTAATCCAGGTAAGATCATGTGAATTTTATC TCATAGAACAGACTTTGTTCGAATGGGTTTATTTAATCTTATCTTATAACATAAACACTTATGCAAGTATTTGAGAAAGC TTATGTAAATAACTACGTACCAATATTAACTTATGAGTAAGCGCTTTAAGCACTTAATGAGCGTTTAATTAAGTGCAGTG CTTTACCCAAACACATGCACCCTTATAGCATATTTGAAAATCATACTAAAATTGATTTTATAGTTAAAACTAAAATCAAG CAAAAATTATTGTGAGTAACTTTCGAGTATCATAATTTTTTTTAGATAAAGTAAGTGAAAATCTCACATTGACTACAAAT TTAACCGAGATAGTTTACTTTTTATATATGAAAAAACAATCTTCTTCTCATGAATAGTTTTTTAGTTGAATTAGATATCC TAAATTCTAATTGTAAGTGATCCAAACATGTTAAATGTTTTTTCATTTCCTCTATATATGTTGGCTTCTTTTACTCATGG GCTATGGGGTTGAGGAGAGGGAAGAAGTGACATTTTTCTCCCCCAAATTAGTTAGTTTAGTGTCTAAGTGCACATCAAGC TTATATATCCCTAACTCTATCATTTGACCTATATTGGAAGTCTATTAAAGTTGATTACCATGTATCATAGCTAGGAGAAA AGTTCAAAACATGATTTTGCATTTCTGCCTTATTTATGCACTTTTATCGAACAGGGTGATTGATGGACCACTAAGAGTTT CCAATACCTTATAGCCACTCAATACATGTGGTAAAACAGTGAGAGGAGAGTTAGGAAAAAAAAGGAGTTTTAGTACAAGA AAATGATGAGTGTCTGAGTGTATGGTATTATTAGGGGATATATGGAAGTCAAATTCATAAACACACTTATTTTCTTTCTT TTTAAAAGGAAACAGCAAAATGCCAATCAGTTTTTGTTAGACCATTTTTAGCTTAAAACATAACATATCTACGCTTATTT TTAATTGAAAAAGAGAAGAAAAAATAAACAAAAGTTAAAAAGAGAAGAATTTAATAGTGAACATGATGAGAAGAAAAAAG ATCTAGATAGAGAGAAATGTGTAAAAAAATCAGAGGTGCTTTATGAAAAGAGATAGTGGTTAGCTAGAGTGGTGACAATT CAGGACATGGTGCTTGCCTTTCATTGGCGCTCGCTTTTCCTTTCCCTTCTCTATTAGTATAAAAAAGGTTCCATTCATGA ATCTCAATTAGTAACAAAACAATTTGAGATTAATTTCTATGCACCGACGGTGTAAAAAGTTTTACACCATCATTTAATCA CAACCTTCCATTTCCTATTTTTAGATATTCTTAAATTCAAAATTAATTTTAAGCTAACAAAATGGAGGGATATGATTGAA TGATGGTGTAAAACTTATTTACACCGTCGGTGCATAGAAATTAATCTCAAACAATTTATACACTCTATTTTTACTCTTTA TATCTATTTTCTTATCGCATTAAATCATATATTAAATCGATCACTTACTTAGTGTTCTTTTTTCTCACACTAAAAGTCTA AAGTCTAATGTAATCGATCATTTTCATAAAAAGTACTATTGTATTTACAAAAAGAAAAAGGTTAAGAATGAATGATTACT TTAAATTCTCCTAATACGTCTTTTTTTTATTCAATTTAGATATTTTCAAATTAAATTTCTCTTTCACCAAAATTTCATTT ATTTATTTTATCACACTACTTATTATATCACTCGTTTTTCACTATTTTATTTTTTATGTGGTTTAAATTGAATGATGAAC ATGGTGGTGTGTAGGACTCTACTTTGGTTGGGTTGGAATTTTAGACTAATCAAGATTCGAACTAATCAAAATTGTTTGGG TTGGATTCGGTTGGATTTCGTGAATTTTCACCTACGGACCCGAACCAACCCAATTCGACAATCTTAGGGTTGGTTTTGAT GGATTAATTGGATCGGTATATTAAACTAAAAAAATTTAGAATATTGAAAAATATTAAAAAATAAGTGCTCCAAATTTCCA ACATGGAATTATATATATCACAAGTTCATAATTACTGTCTGCACACATCCATACAATAATACATAACTAAACAAGTACTA CATGTGTTTAAATATGAAAAATAATTACAAACAAATTAGTCTTCAGGTCTCCTAAAAATCACTCTAGTAATAGGACTCAA AGTCTCCATAAATTACATACACTCTATTAGTGAGTTAAGTAAAAATTATAGTTATTAAAAATATATATTAAATAATATAT TATTATTGAATGATTTGATTTCGGGTTGAGTTTGATGAATTATTATGGAATTCAATATCCAATCAAAAAATGATTGAATT GTAATAAATCATCAGATAAACCCGCTTGCCCACTTCAACCCGCATTTTTACCATTAGATTGGGTTGGATTAGACGATTTC ATTGGGTTAACCCGACCATGCGTAGTGCTGAGATGATCTTTATTCTTATTTTATCACACATTTCTCACTGTCACATATCA CTCATCTATATTTTTATTCTTTTAATTCCTTCAGGTGACAAGTCTCCGCTGCGGGGGAATGATCCTATGCACCGCAATCA ACCACTGCCTATGCGATGGCATCGGCACGTCACAATTTCTCCACGCCTGGGCCCACCTAACCACAAATCCCACCACCAAC TTAACCATCACACCCTTCCACTGGCGCCACGTGTTAAGATCTCAAAACCCGGCACAGGTAAAACTCCCTCACCCGAGTTA CACCAGAACAAAGCTCACACCTCAAGTGGACCTCTTCACGTGGATGCAAACCCAATCACTAGTCGCCACGTCATTCACCT TCGGCCCCACCGAGGTCCTCCGGTTAAAGAAACATTCCCGCGTGCCGCGCAACACCACAACTTTCGAAGCAGTCGCAGCG CACACGTGGCGCTCGTGGGTCCGATCACTGAACCTGGGTCCCACAGTAACAGTCAAGCTTCTTTTCTCGGTCAACGTTAG AAAGAAGTTGAATCTCCCAGAAGGGTTTTATGGGAATGGTTTTGTGCTCGCATGTGCTGAGTCTTCGGTGTGGGACTTGG TGAGTTCTGATGATAATTTTCACCATGTTGTAAAACTAGTGCAACAAGCGAAGGGTGATTTGAGTGAAGAGTGTGTGAGG TCGATGATTGATTTGTTGGAGGATAAAAAGGTGAGGACTGATCTTTCAACTAGCTTGGTGATTTCTCAGTGGTCGAGGTT GGGGTTGGAGGATGTGGATTTTGGAGAAGGGAAGCCAGTGCATATGGGTCCTCTAACGAGTGATGTTTACTGCTTGTTTT TGCCGGTGGTTGGAGATGCTAAGGCGGTGAGGGTGCTCGTGTCGGTGCCGGAGAGTGTGGTGGAAAGGTTTCAAGGTTAC ATGATGATAAATGAGAGTTGGGAGAAAGATCATGGAGATGGTGATGTTAACAACACAAATAATATTAATGGGGTAGCATG CGTGATGAGGAAATGATTGTGGATATCAATCTGGATTGTGTAATGTTATACTATGTATCTATCAAGTTGCATTCAGGAAA GTCTTGAGAATAATGATAAGGGGGAGAATTATATGTTTGTATGAATTTGAGTGCATGTAGGCGGGACAAAAATGATGAGT GGACAACCGTTGGGGGTGGATATGCAATGATAGAAAGTAAATGGTTTCATATGATATGAGATGATCGAAGCATAACATGT ACCACATTTAGACACTTTTTTTTTAACGGGTTTTAAATGTCACAAAGTGGAAAGTTTATTTTATATTTCTAATTTTCGCT TTGCATAAATTTTCCACTTTGTGACTATTAAAAACTATTAAGACATGTGTTTAAATATGATTGAAATTGTACATGAATTT ATTTATGGAGGTTGATTCATGAATCTTTAGTATGTATTAGGATGTCTAACTCAACCCAAAAACTAGCTCAAGAGTTGAGA TTTGCACAATCATATATAAGCACTTGATTGACCATGTCTCTAGCCAATGTGGGCCTCTAACAGTATGTATTGACCTATGA GGCTTGTTCGGTTGCAATTTTATTTTCTATTTCTAA 

CDS sequence (LotjaGi5g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTACAATATGTGGAACTCCCTGATTGTTTCTATCCTACACCACCAGTAACAATCCCCCCAAGTGCTCCAACGCCAAA ACAATCTCTCTATCTCTCTAACCTTGACGACCAAAAGTTCCTCAGATTCTCCATCAAGTACTTGTTCCTCTTCAAGAAAT CGGTGAGCTTCGACACGTTGAAGTCCTCTCTGGCTAGAGTTCTGGTGGATTACTACCCTTTGGCTGGTAGGTTGAGAACC AGCATTGAGGAAGATCACAACAAGCTTGAGGTGGATTGTAATGGAGAAGGTGCAGTTTTTGCTGAGGCTTTCATGGATGC AAGTGCTGAAGAGTTACTTGAATCTTCCAAGTTGCCAAACAAGTCATGGAGAAAGCTCTTGTACAGGGTGGAAGCTCAGA GTTTCTTAGATGTTCCTCCACTTGTAATCCAGGTGACAAGTCTCCGCTGCGGGGGAATGATCCTATGCACCGCAATCAAC CACTGCCTATGCGATGGCATCGGCACGTCACAATTTCTCCACGCCTGGGCCCACCTAACCACAAATCCCACCACCAACTT AACCATCACACCCTTCCACTGGCGCCACGTGTTAAGATCTCAAAACCCGGCACAGGTAAAACTCCCTCACCCGAGTTACA CCAGAACAAAGCTCACACCTCAAGTGGACCTCTTCACGTGGATGCAAACCCAATCACTAGTCGCCACGTCATTCACCTTC GGCCCCACCGAGGTCCTCCGGTTAAAGAAACATTCCCGCGTGCCGCGCAACACCACAACTTTCGAAGCAGTCGCAGCGCA CACGTGGCGCTCGTGGGTCCGATCACTGAACCTGGGTCCCACAGTAACAGTCAAGCTTCTTTTCTCGGTCAACGTTAGAA AGAAGTTGAATCTCCCAGAAGGGTTTTATGGGAATGGTTTTGTGCTCGCATGTGCTGAGTCTTCGGTGTGGGACTTGGTG AGTTCTGATGATAATTTTCACCATGTTGTAAAACTAGTGCAACAAGCGAAGGGTGATTTGAGTGAAGAGTGTGTGAGGTC GATGATTGATTTGTTGGAGGATAAAAAGGTGAGGACTGATCTTTCAACTAGCTTGGTGATTTCTCAGTGGTCGAGGTTGG GGTTGGAGGATGTGGATTTTGGAGAAGGGAAGCCAGTGCATATGGGTCCTCTAACGAGTGATGTTTACTGCTTGTTTTTG CCGGTGGTTGGAGATGCTAAGGCGGTGAGGGTGCTCGTGTCGGTGCCGGAGAGTGTGGTGGAAAGGTTTCAAGGTTACAT GATGATAAATGAGAGTTGGGAGAAAGATCATGGAGATGGTGATGTTAACAACACAAATAATATTAATGGGGTAGCATGCG TGATGAGGAAATGA 

Protein sequence (LotjaGi5g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLQYVELPDCFYPTPPVTIPPSAPTPKQSLYLSNLDDQKFLRFSIKYLFLFKKSVSFDTLKSSLARVLVDYYPLAGRLRT SIEEDHNKLEVDCNGEGAVFAEAFMDASAEELLESSKLPNKSWRKLLYRVEAQSFLDVPPLVIQVTSLRCGGMILCTAIN HCLCDGIGTSQFLHAWAHLTTNPTTNLTITPFHWRHVLRSQNPAQVKLPHPSYTRTKLTPQVDLFTWMQTQSLVATSFTF GPTEVLRLKKHSRVPRNTTTFEAVAAHTWRSWVRSLNLGPTVTVKLLFSVNVRKKLNLPEGFYGNGFVLACAESSVWDLV SSDDNFHHVVKLVQQAKGDLSEECVRSMIDLLEDKKVRTDLSTSLVISQWSRLGLEDVDFGEGKPVHMGPLTSDVYCLFL PVVGDAKAVRVLVSVPESVVERFQGYMMINESWEKDHGDGDVNNTNNINGVACVMRK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 9 428 420 2.4E-186
PANTHER 9 428 420 2.4E-186
Gene3D 14 215 202 1.2E-54
Pfam 18 424 407 2.9E-68
Gene3D 217 428 212 1.2E-42

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0012500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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