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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0016200 |
| Transcript ID | LotjaGi5g1v0016200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT1G19430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9LN50|PMTS_ARATH Probable methyltransferase PMT28; TrEMBL-Plants: tr|A0A1J7HAL1|A0A1J7HAL1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0016200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3166539..3173847) extracted from Lotus japonicus Gifu genome v1.2.
TCAATATATCTAAAACAAACTGACTTAAATTTTCTTTAGATATGAATCCTTTTCCATATGACTTTTATGTTTTATCCATA ATGATAATAAATAGTTTTATTACAGTTGAAACTTGAAACTCTGAGTCTGACTTCTACTGTCTCTCCGAGGAACATGATCT ATGCCAAACCATGATTCCCCAACCACTGTCTCAGATTTCAACCACCCACTTCAGTGAAAAGGCATCCTACAATTGATTCC AAAATCCAAAATCAATGAAATCAGCTTCTGTGAGCAACTTCAACTGATTCTCAGAAAAGAAGCTGATCCAAACCTGTTGT TGTTAGATCAAATTCAAATCAAATGCATACTACTTCCAAGTGCTGATTCTGAAATCAACAGTGAGTGATGGCCATAGCTA GGCAAGCAAAACGCCCATGTGGGTTGTGGGTAAAGATGACAGCTGTGACCATATTGGGTCTCTGCTTCATCTTCGTCTGG ACTGTGTTCTCTTCTTCTTCCACCAACGTCTCCATCCATAGGGAAAGCTTTGAGGACATTGCTGAACCCGTTTCCGCTTC TTCCAGGAATCAAGCTCAAAAACCCAAACCAGAAATCCATGAATCCTCATCACACAGTGTAAAAGATGAGAAAAGGGTTG ATGGGTCTTCTTCCTCCACGCATCCTCCTCCTCATCATGAATCCAAGGCAAAGGAAAAGAAGAAAGGGGTGGCGCATGAG AAGAAAAGGTTGCATAAGGAAGATGAAGAGAAGCAGAATCAAGGGTCATCAAGTGATGAGCATGATCCCCAACCCCAACA TCAGGAAGAGGAGGGTGAAGAAGAGGTGGAGTTGGAGGGTAAAGAAGAAGGTTTAGATCGTGAGAGTGAAGTGGGTGTGG ATGGGGACACTGGTGGTGATGCTAGCAGCGATTTGGTTGAATCTGTGGATCAGGATTCTGAAGAGTTGGAAGATGGAAAT GTGGAGGAGTTGAAAAAAGCAAGTAAGGGAAAGGTGAAGGGACCTTTGTTTGATCCAAATGCTAGCTACAAATGGAAATT GTGCAGCACCAGAAGCAAGCATAACTACATTCCCTGCATTGATATTGAAGCTGGTGGTGGAAAGGGGCAGGGTTACCGTC ATAGAGAGAGGAGTTGCCCGAGGACACCCTTCATGTGTTTGGTTCCTCTTCCACATGCAGGGTATGGGTCTCCACTGCCA TGGCCTGAGAGCAAATTGAAGGTATATGAAAAAGTAGATAATGATAAGGTTAGATGTTGGAGTGTTACTTCTTTGTTATC TCATGGTAACATGTGGCGTCAGTGCAGATTTTGTATAAGAATGTTGCGCACCCGAAACTGGCTGCGTATATCAAAAGGCA TAGTTGGTTGATGGAATCTGGAGAATTTCTTACTTTTCCCCAAAACCAGACTGAGTTCAAGGGAGGGGTTCGTCACTATC TTGAGTCCATTGAAGAGGTAATTTTTCTATTAGGGTGCATTATGTTTGGTCCCTCTTAAGCATGGGTTTTGTTTGTTATT TTTTCTAAAAAATGAGAGGAGCAGCTGCTAGATTTTATTCTCAAACATGATAAACTCATAGTTAGTTCACTTGCATTAGA GATTCAGATTTCAGATTAGTCTGTTAGTAATGTGATGGCTTGTTTTTTCTTATTTTCATTGTAATGTGACACTCTAGGAG GAGAAATTAGTGAGTTAAGGGAAATTGCTAATTATATTAGGCCTACACAATATGTATACTTTATGTGATATGGAATGTGG TTTAATAAATTCATGATAAGTGGAGAATGTACCATACCGTAAGTCCCACGATTTAAGTGTAAGGAGGAGGAGTGCTAGCA ACACACTCTTTTGAACACTTAATATGATTGGTTTAATTTTAAAAAGTCAACATATTTTTTAAGAGGTGAAAGAAATGTGT TACTTTTCAAGGAAATAGAGGGACTTGTCAACGATATAATACAAATAGGGTGGCTGAAATGAAAGAATGCTTCTGCCATA ATTTGCGAAAAAAAACTATGATTGAAGCTATAAGGAAAATTTTACTGCTCAACTAATCATCTGAGATTGAGTGTCGAGTG CTAAAGTGCTAACTAGAAAGTTAACTTAGTCTTGCGAAAATAAGAATGTTACAATGTAAAAGTGATCACACAAGATGAGA TTTGATTAGGAAAGAAAGCTTTAGAGAAAAAGTTGGGGTAGCACCCATTCTGGAGAGGACGAGAATTGACTAGGAAAGAA AGCATTAGAGAAAAAGTTGTGGTAGCAGTAGCACCTATTATGGAGAAGATAGTAGAGTCTCGTTTTAAGTGGTTCAGGTC GTATGGAGAAGGCCTTAGAAGCACTAGGGTTGACCTGACAGAGGATTGTCCAATAGTTAGAGCCTTAGAGGTAGAGGGAA ACCAAAGAAAGCTATAGCCTATTTTAGGTCAAACCATGAAGAAGGGTTTGGATTTTTGCACAACTGTTTGCAGTGATTGG TTCTTTATGCATGGTGATAAATTTGTTTCATATATTATATATTATATATCGTGATGTTGATGTTGACATTTGTTTATATT TGCAAATATTATGACTTTCAACTTAACAGAAAAGATATTCGTTAACATTTATTGCTGTCATCCTTGGACGTGTTTTAAAA TTCATTCTTAATTTTATAGATGGTACCGGACATTGAGTGGGGTAAAAATATTCGTCTTGTCCTGGATATTGGATGTACAG ATTCAAGCTTTGTGGCTACTCTCCTTGATAAGGAGGTTTTAACATTGTCACTAGGCTTGAAGGATGACCTAGTGGACTTA GCTCAGGTGGCACTTGAGCGTGGCTTCCCATCAGTGGTTAGCCCCTTTGGCAGAAGGAGGCTTCCTTTTCCAAGTTATGT TTTTGATGCTGTACATTGTGGGGGTTGCAGCATACCTTGGCATTCCAATGGTTTGTGCACTTGTTTTAGTTCTGTATTTT TCAAATACTTTTTTCTCCAAATTATCATTATGTTAATTGCTAGTATCCCCTTCATTTTTCAGGGGGTAAGCTTCTATTAG AAATGAATCGTATTCTACGACCTGGTGGATACTTTATTATGTCAACTAAACATGACAGCTTCGAACAAGAAGAAGGTTGG TCCCACTTTTGAATCAAAGTTGTAGTCATAGATGACCTAAAAGAACTCTGCTTCTTGTGATTCATTCTCTCCATCTCTCT ATTCCAGGCTTTAGCTTTGGTTATTATGATACTTCTTGCTTGATGCAATTCACATTTACTTATCATCTGTGTGAGCAAAA GTGCAAAACGAAAGCAGGATATTTAGTTAGGTGTATTTTTTTGTTGAAAGGGGTGGCATTTATGCTCTTTAAAGTGATGA TAATGCAGTCTGTGTGAGGAAACAGTACTATAAACTAAGATACACTATCTCCATCCAATGTGATGATAAGCCATCAAACA AGAAAAAGCCCTAAAAGATATTAACAAGAGAGAACTATGGAAAAGAGGCTTGTGAACAAAAACTGAACTACTTCACTTGG CTTTCTTGACTTACTCATGAGAAAGGTACATATTTATGAGCTCCTTAGATAATTCATAGTTCTACTTCTACATTTGACTT AATTGAGCTGACCTTGAAACTAATGACTAATAACTTATAAGTGGCTTATTAAAAATAGAAATATGCAATACATGAATCTT GAACTTAGAAGTAAACAATTGAACAGTGAAATATTAAATTAGTGGTAAGCACTAACTTTTCTAAAAAAAATTGAACTTCT TCATTTCCAACAGCTTGATGATACTTTCTCTCCATGTCTCATTTCGTGTGTGTGTACCTTTATTTCCGCTGCTTTTTTTT TCATCAGTTCATTCGTTTCTATAACATAAGTAGCATCTGCGGGTTATGATGTCTAAACGATGCTGCTACTGTGTACATAG TGTGCAGTATGCTCCCTACCTTCTGTGCTTATCGGTTGGGTATCAGATGCCCATTGCCTTTTGGCAGAAAATATTGAATT ATATTATGTTATCTTGCAATGCTTTCTGGAGATATGAACCTTGCTCTGCATCATTTAAGTGACAATTGAAGTGCCATAGA AGAGGCAGTGACATATATTTTCTGTTCCAGCCATGACCATGTTGACAGCATCTATTTGTTGGAACATTCTGGCACATAAA AGTGATGATGTCGGTGAAGTTGGAGTTAAAATATATCAAAAGCCTGAAGGAAATGACATCTATGAATTGAGGAGGAAGAA GATTCCACCACTTTGCAAAGAAAATGAAAATCCCGATGCGGTCTGGTATGCTCCTGTGATATAATGCGATTTTCTTTCTA CAACTTACCCAGTTATAACTTTTTATACATGAAAGTAAAAGCGTATTTATCTTCAGCATGTGAACCTGATTTTTCTTGTT ATTTTATGTTAGAGGAATTCATTTGCATGACAGTACATTTGAGCTTTGTTGGGTGATATACTGTAGCTATGCTTAGAAAG TTAGAATTGATCATTTGAGCTTCCAAACCAAACTTAAAAGAAAGATGACAAGTTAAGATTGAAGTGCATTATTAGATGCT TGGGATATTTCCAAACCAAACTCATCATTTATGCTATATTATGGATATTTTCTTTTGGTGTCATTCTGTTTGTTACTGCC TAATAGATGAGCTGTTTCTAATTATCTTTCCTTGGCAATTTTTAATATTCTTTGAATAGGTATGTTCCAATGAAGACTTG TTTGCACATCATTCCAATTGGAATCGAACAACATGGAGCAGAGTGGCCTGAGGAATGGCCCAAGAGGCTTGAATCTTATC CTGATTGGGCAAACAATAAAGAGAAATTGGTGGCGGACACCCACCACTGGAATGCTATTGTTAACAAGTCATATCTCAAT GGAATGGGCATTAACTGGACAAGCATCAGAAATGTAATGGACATGAAAGCCATCTATGGAGGGTATGCTAGCAAAACATC TTGATTTTATACTCAATTTGAAAGCCTTACAGCATGTTTCGGTTCACGTTTAAATTTTCCAGAATCACTTTTCTCCCCCC AAAAGCTACTCCTGGTAGCTTCTTTCAGAATCACGTTTTCCCAACATGAAAATTTACCAGGTTATCAAATATACTCTTGG TGCATGTTTGGAAAACTTTCTATAATGGATTCTAAAGGCAGAATCAATTCTGGGAAGAAGCACATGTGTCTAACTTCTGC ATTTTAGAATTGATTATGAGGAAAGAGAAGCTAATCGAAACATGTTCTAAGTGTGCTTGTTTGTATGAACACAAATGTGA TTTCACAGATCCAAGGTACAAACAGAGAAGCATGATTTATGGCGTTTAATTCAATATGGATCAATGTTGAGTTCAACAGA AATCCAAACACACAATTATAACTTCTAGACATCACATCATGTATAAGTTTGTTGCATCAACTAGTGAGCTGCATTTTTCT TTGAAACATAATTACATATTCAATGTACATGTGATTTCGATTCAACCTGGATGATTTGTTACATATATTTGAAACATGGG GTAAAACTAAAATGATAATTCTCCCCTCAAAATACAGATTGGCTGCTGCTCTCTCTCAACAACAGAAGGTCTGGGTGATG AATGTAGTCCCTGTTCACGCGCCGGATACACTTCCCATTATTTTTGAACGTGGGCTTGTTGGTGTCTCTCATGATTGGTG CGAGTCATTTGGAACTTACCCAAGATCGTATGACCTTCTGCATGTTGATCATTTGTTTTCACGGCTCAAAAACAGGTATA ATTAGTGGAAACTTTTTCACACTGTTGTGTTTATTTTTCTCTAGATGCTCCTCCATTTCCTTGACCCTTAAATGGTTCGG TTCTTGTGGATTATAGTCAAGTTTGAGTTTTATTTAAATATTGGTCTCGTTCGGAAGAGCTTGTTTGAACTTATCTTATA GCAAACGCTCCAAAATTCCAGGGGTTATTTGAAAGTGTGACGTCCTCGCTGTTCCCCCAATCTTCTTATTGCCGAGCTAT GCCTAATTTACCTAGACCAAGCCATGCCCTATTTACCCAGACTGAGCTATACTTAAGTTTACCCAAACACGTGTGTGAAT GCTGAATAAATTAGGGGTACCTCCGAATGGGTAAATAAGGCATTGGCTCGGTTTAGGTAAATTAGGCATAGCTCGGCCAA AGATTGACGGAACAACGAGGACGTTACACTTTCAAATAAGGTTATGACTTATGACCTATCTATAAGTTGTTTGATGCTTA TTTTCATAAGCTGATCAGAGTAGCTTATGAATAAGCTCTAATAAATATCTATAAGCTATTTTGAGCTTATTTCAAAGTAT ATCAAATTAAGATTAGCTTATAAATAAGTGCATAAGTTCTTAAGCTTAAGCTATTTACCCAAATGCACTCATTATTGTTT GAGTGGTAACTACATTCTGAAGCGTACTGCCATGTTCACTTCCATTTTTCATTTAACTTGAGCTCTAATATATGCTTAAG CTAGTTGAAACTTGCGACCGAATTGCTTCTATGTGGTTGAAACAATTGTTTTGCAGGTGCAAGCAACCTGTATCCATTGT TGTTGAGATGGACCGGATATTAAGACCTGGGGGTTGGACAATCATACGTGACAAGGTTGAAATTCTGAATGCATTGGAGG AAATACTGAGAAGCATGCAATGGGAGATCAGAATGTCATTCAACCAGGATAAGGAAGGGATTCTTTGTGCGCAGAAGACT CTGTGGAGGCCTTGAATCTCTATTGTATGCTGTTTTCTTGTACCATATCGACCACGAGTGCCACTGTGACTTGAATTATC ATGATCTTTCCTTCAACTGAAATGATATGAAGGAGTTTTCTGGGTATCCTTCATCTAACACATCAACCAATCATCAATTC CGATCAATATAATATGTAAAGGAAAGTTGAGTTTGTAAAAATTTATTTGATTTATATTGATTGTTCAAATTTGTTTGATT ATAGAATTTATGGAACGTTATTTCTTTTTAAGTAAACAACTAGTCCAGTCATAAATAATAAAGTGGAATTTTCACTATAG AGAACGAATAATGATGAGGTCCGATTATGAATTTGTTTTTTGAGGGATTTGATTTTTTGGGTTTTCTTTGGGGGGGTTTT ATTTTCTGGGTCGATGGAAAGAATGATGAGGTCTGATCTGGACTCTTTAGAGTGTTGTCGTTTCAGGGGAAGAACAGAGA GGAAGAAGGTGAAAGGAAAAAAATTGTTCAATGTTTGCAATAAATAACAAACGTTGGACTTATAACACAAACAAATCGTG TAGCCTTGTGGTAAGGTATATTTAAGTTG
CDS sequence (LotjaGi5g1v0016200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATAGCTAGGCAAGCAAAACGCCCATGTGGGTTGTGGGTAAAGATGACAGCTGTGACCATATTGGGTCTCTGCTT CATCTTCGTCTGGACTGTGTTCTCTTCTTCTTCCACCAACGTCTCCATCCATAGGGAAAGCTTTGAGGACATTGCTGAAC CCGTTTCCGCTTCTTCCAGGAATCAAGCTCAAAAACCCAAACCAGAAATCCATGAATCCTCATCACACAGTGTAAAAGAT GAGAAAAGGGTTGATGGGTCTTCTTCCTCCACGCATCCTCCTCCTCATCATGAATCCAAGGCAAAGGAAAAGAAGAAAGG GGTGGCGCATGAGAAGAAAAGGTTGCATAAGGAAGATGAAGAGAAGCAGAATCAAGGGTCATCAAGTGATGAGCATGATC CCCAACCCCAACATCAGGAAGAGGAGGGTGAAGAAGAGGTGGAGTTGGAGGGTAAAGAAGAAGGTTTAGATCGTGAGAGT GAAGTGGGTGTGGATGGGGACACTGGTGGTGATGCTAGCAGCGATTTGGTTGAATCTGTGGATCAGGATTCTGAAGAGTT GGAAGATGGAAATGTGGAGGAGTTGAAAAAAGCAAGTAAGGGAAAGGTGAAGGGACCTTTGTTTGATCCAAATGCTAGCT ACAAATGGAAATTGTGCAGCACCAGAAGCAAGCATAACTACATTCCCTGCATTGATATTGAAGCTGGTGGTGGAAAGGGG CAGGGTTACCGTCATAGAGAGAGGAGTTGCCCGAGGACACCCTTCATGTGTTTGGTTCCTCTTCCACATGCAGGGTATGG GTCTCCACTGCCATGGCCTGAGAGCAAATTGAAGATTTTGTATAAGAATGTTGCGCACCCGAAACTGGCTGCGTATATCA AAAGGCATAGTTGGTTGATGGAATCTGGAGAATTTCTTACTTTTCCCCAAAACCAGACTGAGTTCAAGGGAGGGGTTCGT CACTATCTTGAGTCCATTGAAGAGATGGTACCGGACATTGAGTGGGGTAAAAATATTCGTCTTGTCCTGGATATTGGATG TACAGATTCAAGCTTTGTGGCTACTCTCCTTGATAAGGAGGTTTTAACATTGTCACTAGGCTTGAAGGATGACCTAGTGG ACTTAGCTCAGGTGGCACTTGAGCGTGGCTTCCCATCAGTGGTTAGCCCCTTTGGCAGAAGGAGGCTTCCTTTTCCAAGT TATGTTTTTGATGCTGTACATTGTGGGGGTTGCAGCATACCTTGGCATTCCAATGGGGGTAAGCTTCTATTAGAAATGAA TCGTATTCTACGACCTGGTGGATACTTTATTATGTCAACTAAACATGACAGCTTCGAACAAGAAGAAGCCATGACCATGT TGACAGCATCTATTTGTTGGAACATTCTGGCACATAAAAGTGATGATGTCGGTGAAGTTGGAGTTAAAATATATCAAAAG CCTGAAGGAAATGACATCTATGAATTGAGGAGGAAGAAGATTCCACCACTTTGCAAAGAAAATGAAAATCCCGATGCGGT CTGGTATGTTCCAATGAAGACTTGTTTGCACATCATTCCAATTGGAATCGAACAACATGGAGCAGAGTGGCCTGAGGAAT GGCCCAAGAGGCTTGAATCTTATCCTGATTGGGCAAACAATAAAGAGAAATTGGTGGCGGACACCCACCACTGGAATGCT ATTGTTAACAAGTCATATCTCAATGGAATGGGCATTAACTGGACAAGCATCAGAAATGTAATGGACATGAAAGCCATCTA TGGAGGATTGGCTGCTGCTCTCTCTCAACAACAGAAGGTCTGGGTGATGAATGTAGTCCCTGTTCACGCGCCGGATACAC TTCCCATTATTTTTGAACGTGGGCTTGTTGGTGTCTCTCATGATTGGTGCGAGTCATTTGGAACTTACCCAAGATCGTAT GACCTTCTGCATGTTGATCATTTGTTTTCACGGCTCAAAAACAGGTGCAAGCAACCTGTATCCATTGTTGTTGAGATGGA CCGGATATTAAGACCTGGGGGTTGGACAATCATACGTGACAAGGTTGAAATTCTGAATGCATTGGAGGAAATACTGAGAA GCATGCAATGGGAGATCAGAATGTCATTCAACCAGGATAAGGAAGGGATTCTTTGTGCGCAGAAGACTCTGTGGAGGCCT TGA
Protein sequence (LotjaGi5g1v0016200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIARQAKRPCGLWVKMTAVTILGLCFIFVWTVFSSSSTNVSIHRESFEDIAEPVSASSRNQAQKPKPEIHESSSHSVKD EKRVDGSSSSTHPPPHHESKAKEKKKGVAHEKKRLHKEDEEKQNQGSSSDEHDPQPQHQEEEGEEEVELEGKEEGLDRES EVGVDGDTGGDASSDLVESVDQDSEELEDGNVEELKKASKGKVKGPLFDPNASYKWKLCSTRSKHNYIPCIDIEAGGGKG QGYRHRERSCPRTPFMCLVPLPHAGYGSPLPWPESKLKILYKNVAHPKLAAYIKRHSWLMESGEFLTFPQNQTEFKGGVR HYLESIEEMVPDIEWGKNIRLVLDIGCTDSSFVATLLDKEVLTLSLGLKDDLVDLAQVALERGFPSVVSPFGRRRLPFPS YVFDAVHCGGCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSFEQEEAMTMLTASICWNILAHKSDDVGEVGVKIYQK PEGNDIYELRRKKIPPLCKENENPDAVWYVPMKTCLHIIPIGIEQHGAEWPEEWPKRLESYPDWANNKEKLVADTHHWNA IVNKSYLNGMGINWTSIRNVMDMKAIYGGLAAALSQQQKVWVMNVVPVHAPDTLPIIFERGLVGVSHDWCESFGTYPRSY DLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSMQWEIRMSFNQDKEGILCAQKTLWRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 5 | 719 | 715 | 0.0 | – | |
| PANTHER | 5 | 719 | 715 | 0.0 | ||
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 34 | 23 | - | – | |
| Phobius | 35 | 720 | 686 | - | – | |
| MobiDBLite | 54 | 202 | 149 | - | – | |
| MobiDBLite | 65 | 87 | 23 | - | – | |
| MobiDBLite | 112 | 139 | 28 | - | – | |
| Pfam | 226 | 715 | 490 | 5.3E-184 | ||
| SUPERFAMILY | 265 | 447 | 183 | 8.53E-14 | ||
| Gene3D | 316 | 491 | 176 | 1.3E-10 | – | |
| CDD | 342 | 439 | 98 | 2.13305E-4 | – | |
| SUPERFAMILY | 513 | 706 | 194 | 1.52E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0016200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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