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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0017000 |
| Transcript ID | LotjaGi5g1v0017000.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT4G34480.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7; TrEMBL-Plants: tr|I1M8D6|I1M8D6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0017000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3247065..3251751) extracted from Lotus japonicus Gifu genome v1.2.
GTATCCACATACATTCCTTCATTATGATTCATATTTTGAATTCCTGAACATATATCGCATTGGCATTGGCATTGGCATTG GCATTGGCATTGGCATATGCTAAGTAAGACACACTAATCAAAATCTACTTTTAAACCATCTTGAAAAGCATTGAAAATAA CTTCACACTTTCAACTCTACCCGTTTTACCCCCAACCCCTTGCTATATATATTTCCATTTCCCCCCTTTCTTTCACTCAG AAGAAGTTCATTCTTTCCTTGCAAGTTCCAACATGGCAATCTTGGTCTCTTCCTCTAGAGTCCTTCTACCTATCCTGCCA CTCTTTCTCGCATTCAATCTTGCAAGTAAGTGTTCTTGAAACCTTGAAATAATCCCACTTACTTGAAACTTATGCACCAC TCTTAAGATTCACAAGACCGAGTCGGGTGAGGTGAAGACAAAATGTTTTTCAACAGTGCTGCTCTTAAGATTCGAACTGT TGACAGTTCAAAGTTCAAACAACCACTTTTTACCACTGGACGAGACGTAGCAAGTTGAAACTTAGATTTTAGATATTTTG TGTCTTTTAATTTGCTATTAACGTGAACAAGAAAGTGTAGTGATAATTGCCACTATTATTCTGTGCAGATTCTGAACCGT TCATCGGCGTGAACTATGGCCAAGTCGCCGATAACCTACCACCGCCGTCAGCCACGGCGAAGCTTCTCCAGTCCACCGCC ATCGGAAAGGTCCGGTTATACGGAACCGACCCGGCGATAATCAAGGCCCTAGCCAACACCGGGATCGGAATCGTGATCGG AGCAGCGAACGGCGACATTCCGGCGCTCGCCTCCGACCCGAACTTCGCGAAAACCTGGGTGAGCTCCAACGTCGCTCCTT ACTACCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAGGTGATAACCTCCAATGACACCGGCCTCGTGAACCAG ATGCTGCCGGCAATACAGAACGTGCAAAACGCCCTCGACGCCGCTTCGTTTGGTGGTGGCAAAATCAAGGTCTCGACGGT GCATTCCATGGCGGTTTTGGGTAACTCTGAGCCTCCTTCTGGCGGGAAATTTCACGCTGAATACGACACCGTTTTGCAGG GGTTGTTGTCGTTTAACAATGCTACAGGGTCACCCTTTGCTATCAACCCTTACCCTTACTTTGCCTACAAGAGTGACCCT GGTAGACCTGATAACCTTGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTTGACCCAAACACCAATCTCAATTACAT GAACATGTTTGATGCTCAGGTGAGTCTAAATATGAACTGTGATGGTTACAATTTTACTTGAAAATAGCTTATCGCGTGTT TATAAACTGTTTTGAACTTATTTTCATAAATCGCTCATATTAGCTTATGATAAGCACTTATTGCTTAGTTAAGTTGTTTT TACTTTATAGTAACATAAGTAATTATGTGATTTTACAATTTAACTTGCAAAAATAAATTCTCTCATAAATGTATCCAAAT TTAATCACTTAATTTCAACTCACTTTTGTCAAAATTTATTTTACCAAAATCAATTCTATCACCACTATCGCTTATGACAT GTTTATAAACCATATTGAGCTTATTTTCATAAATCAGTCGGATTCGCTTATGATAAGCTCTTATTGCGTAGTTAGGTTGT TTTTTTTTGGTGCGTGCTTAGTTAGGTTGTTTACCGTACCATTATGTGATTTTACAATATTACCTTACAAAAATAAGTTT TCTCATAAATGTATCCAAATTTTAATTTTAATCGCTAAATTTGAACTCGCTTTTGTCAAAATTGATTTTACCAAAATCAT TTCTATCCACGATCAATTATTAGAATGTTGATCCAATCACACTCATAGTGTCTTTTAATTGTTAATGTATGTTATGATAT GTGTCTTGTGCCATATAGGTGTTTAATGTTATGTTGTGTTGTGTGCAGGTGGATGCTGTGAGGTCTGCGTTGGATTCTCT GGGGTTTAAGAATGTTGAGATTGTGGTGGCCGAGACTGGGTGGCCTTACAAAGGAGACAACGACGAGGTTGGTCCTAGTC TTGAGAATGCTAAGGCTTACAACGGTAATCTGATTGCGCACCTTCGATCCAAGGTTGGAACCCCACTGATGCCAGGGAAA TCAGTGGACACTTACCTCTTTGCTTTGTACGATGAGGACTTGAAGCCAGGACCTGCTTCTGAGAGAGCATTTGGGCTTTA CAACCCTGATCAATCCATGATCTATGATGCTGGCCTCTCCAAGCAACAACAGCAGAGTAGTAGCCCTTCCCCTGTGGTTG CCCCGGTATGGACATATATTTGAATTCCACTTGCATAACATGAGTACTTTAATATTATCTTACACTTCTATATATGACCA TGGATTGATCCGATGCTGTCATTGATTGAGTAACCAGCTTAAATTGTTACATGGACATGAAGTATATCTGCATAAAGCAT CATTTTTCTTAGTTCTTAATATCTTGAAGCTGTTCTATAGAGTAGTGCTTCTAGTCTAGAGACTAGTGTTTAACAAAATG TGTTTCTGAATTTGATTGAAGACTCCGGATGTGTCAAATTCTCCAGCGACTCAAACTCAAGTCCCAGTGGTGATCCCCCC GGTATATATATCTGAATTCCATGCATGATGACTATACTATTATCAATTTATCATTTTTTTTCTATATATAACCTTTGATT AGTCGAATACTGTCATTGATTGATTAACCAGCTGAAATTGTTACATGGGCATGAACACCATATATGCATAAAGCATCATT TTTCTTAGTTGTCAATATCTTGAAGCTGTTCTAGAGTAGTACTTCTAGTCTAGAGACTAGTGTTTAACAAAATGTATTTC TGAATTTGATTGAAGACTCCGGATGTGTCGAAATCTCCAGTGACTCAAACTCGAGCGCCAACAGGCCCAAGTCCAACGCC AAATAAAGCGGAATCCTTAAACCGACACGACGCCCCCATTTTGCAATCTTTAATCATGTTCACTCTTCTCATCTTAAAGC TGTTCTAGTGTAGAGTAGCTTGTGGTTGTATTTAATAATGTAATATTTCTTAATTTTATTGAAGACTACTCCGGATGTGT CAAAATCTCCTGTGAATCCGACCCCAAGAGTTTCAAGTCCAACGAAACCAAATAATAGTGCAACATGGTGTGTGCCAAAA GCAGGAGTGGCAGATGCAGAGTTACAAGCAAATTTGGATTATGCTTGCGGACAGGGGATAGATTGTAGCTCAATCCAACC AGGAGGAGCTTGCTTTGAACCAAACGCATTAGTGAACCATGCTGCATATGCCATGAATCTCTTGTATCAAAAGTCTGGGC GGAATCCATTCAGTTGTGATTTCTCGCAAACTGCCACTCTATCAACATATAATCCAAGTATGTACCAATGTGATTTCTGT TCAACATGCTTTCTGCCTTTCCCATCTTTGAAAGTTGAAACATTGTGGGGTTCGGGCCTTTTTTATTGGAAACATGTTGA TAGATATCCCATAAGGGTGTCTACACTTTAAATACAAAGAAATAATAGGAAGAGCAGGGTTAAATTAATATATGATAAAT GATATGATCTGATATGAAGATAGACAGAAAAGAATAAGTGAAAATATTATTGGGTTGTCAAAAAATTCAGAATTTTTATG TTGTTCTCTAGTGTGAGGCGAAAAAACTGAATAACTAGTAAGAGATTATTTAGTTAGGTCTCAAGTCTCAAGTCTCAATG CCAAATGCATTGCATGAAAGTTTGATTTGATGTAGTACATTGTTCCACAGGGCACTTTTTTGAAAAAGTTATGATCACCG CATCTAGCTTAGATCCGGTCTAATATATATGAACATGGGATTTCTGATTTTTTTTTGCTAAATACTGCTTTGATCATCCC ACTAAATCGATGTCCTCACTTTTCAATCTTTGCTCTTTGTTTATTTTATAGGTTACAATAATTGCGTGTATGCCGGAGGA GCTGCCTAACCTAAAAAACAAGAAAGTAGATACGTGTGGCCCTTTTTGTTTGTTTAAATTATTCTCTCTTAATGGCTAAG GAATGTTTTTGTTTTGGAGCGCTCTGAAGTAGAAGGGCTTGCATGAAGGTCCTCTATTTAGTGTTACCTTTTTTAATGTC TCTGTCAGAAGGAAGCTTCTGTGTTGTGTTGTCTATGATGTGGGTGAACTGTGAATTGTGATGTGTAGTATATGTATGTA TGTTGAGTCATTATTTAAAATCTCAGGGTCCATGTATATACTATGTTGTACTGGTTCAGTAAAAAGTTTTTCTTTCTTAA GGTTTCGCCAAGTTTTCAGTTTAGTCTAATAAATTAAGTGTGCCACATACACTTAGTGCATGTTTGGAAGCTCGTTTGAT GACAAACACTTATTCTTGATCTTAATGCAGTTTTAGCATATCATATACGGTGCATTTGCCACATAAGAAAAGCCATCTGG TACAAACTACTTATGTGCTAGATATGGAGCAAACAAACATCACAGTATATCATTTATCCTTTTGAGTTACCATGTCCTCT AAGTTCATTGGATAACACAATTTAGTGTACCGACCATTCCATATGTTATCTGCAAGAATCGCATTCACTGCATCAGTTGG ATGAAACTGGTCCCACCAAATATAGTTGGAAGCATTCTTGCATGCCA
CDS sequence (LotjaGi5g1v0017000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATCTTGGTCTCTTCCTCTAGAGTCCTTCTACCTATCCTGCCACTCTTTCTCGCATTCAATCTTGCAAATTCTGA ACCGTTCATCGGCGTGAACTATGGCCAAGTCGCCGATAACCTACCACCGCCGTCAGCCACGGCGAAGCTTCTCCAGTCCA CCGCCATCGGAAAGGTCCGGTTATACGGAACCGACCCGGCGATAATCAAGGCCCTAGCCAACACCGGGATCGGAATCGTG ATCGGAGCAGCGAACGGCGACATTCCGGCGCTCGCCTCCGACCCGAACTTCGCGAAAACCTGGGTGAGCTCCAACGTCGC TCCTTACTACCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAGGTGATAACCTCCAATGACACCGGCCTCGTGA ACCAGATGCTGCCGGCAATACAGAACGTGCAAAACGCCCTCGACGCCGCTTCGTTTGGTGGTGGCAAAATCAAGGTCTCG ACGGTGCATTCCATGGCGGTTTTGGGTAACTCTGAGCCTCCTTCTGGCGGGAAATTTCACGCTGAATACGACACCGTTTT GCAGGGGTTGTTGTCGTTTAACAATGCTACAGGGTCACCCTTTGCTATCAACCCTTACCCTTACTTTGCCTACAAGAGTG ACCCTGGTAGACCTGATAACCTTGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTTGACCCAAACACCAATCTCAAT TACATGAACATGTTTGATGCTCAGGTGGATGCTGTGAGGTCTGCGTTGGATTCTCTGGGGTTTAAGAATGTTGAGATTGT GGTGGCCGAGACTGGGTGGCCTTACAAAGGAGACAACGACGAGGTTGGTCCTAGTCTTGAGAATGCTAAGGCTTACAACG GTAATCTGATTGCGCACCTTCGATCCAAGGTTGGAACCCCACTGATGCCAGGGAAATCAGTGGACACTTACCTCTTTGCT TTGTACGATGAGGACTTGAAGCCAGGACCTGCTTCTGAGAGAGCATTTGGGCTTTACAACCCTGATCAATCCATGATCTA TGATGCTGGCCTCTCCAAGCAACAACAGCAGAGTAGTAGCCCTTCCCCTGTGGTTGCCCCGACTACTCCGGATGTGTCAA AATCTCCTGTGAATCCGACCCCAAGAGTTTCAAGTCCAACGAAACCAAATAATAGTGCAACATGGTGTGTGCCAAAAGCA GGAGTGGCAGATGCAGAGTTACAAGCAAATTTGGATTATGCTTGCGGACAGGGGATAGATTGTAGCTCAATCCAACCAGG AGGAGCTTGCTTTGAACCAAACGCATTAGTGAACCATGCTGCATATGCCATGAATCTCTTGTATCAAAAGTCTGGGCGGA ATCCATTCAGTTGTGATTTCTCGCAAACTGCCACTCTATCAACATATAATCCAAGTTACAATAATTGCGTGTATGCCGGA GGAGCTGCCTAA
Protein sequence (LotjaGi5g1v0017000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAILVSSSRVLLPILPLFLAFNLANSEPFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIV IGAANGDIPALASDPNFAKTWVSSNVAPYYPASNIILITVGNEVITSNDTGLVNQMLPAIQNVQNALDAASFGGGKIKVS TVHSMAVLGNSEPPSGGKFHAEYDTVLQGLLSFNNATGSPFAINPYPYFAYKSDPGRPDNLAFCLFQPNSGRVDPNTNLN YMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDNDEVGPSLENAKAYNGNLIAHLRSKVGTPLMPGKSVDTYLFA LYDEDLKPGPASERAFGLYNPDQSMIYDAGLSKQQQQSSSPSPVVAPTTPDVSKSPVNPTPRVSSPTKPNNSATWCVPKA GVADAELQANLDYACGQGIDCSSIQPGGACFEPNALVNHAAYAMNLLYQKSGRNPFSCDFSQTATLSTYNPSYNNCVYAG GAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| PANTHER | 14 | 470 | 457 | 9.2E-233 | – | |
| PANTHER | 14 | 470 | 457 | 9.2E-233 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 483 | 457 | - | – | |
| Gene3D | 29 | 360 | 332 | 1.8E-121 | – | |
| Pfam | 30 | 348 | 319 | 2.0E-81 | ||
| SUPERFAMILY | 30 | 349 | 320 | 2.03E-89 | ||
| MobiDBLite | 351 | 391 | 41 | - | – | |
| Pfam | 394 | 465 | 72 | 4.5E-20 | ||
| SMART | 394 | 478 | 85 | 5.2E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0017000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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