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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0017000 |
| Transcript ID | LotjaGi5g1v0017000.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT5G42720.1 Glycosyl hydrolase family 17 protein; Swiss-Prot: sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7; TrEMBL-Plants: tr|K7M5G2|K7M5G2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0017000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3247278..3252333) extracted from Lotus japonicus Gifu genome v1.2.
TCCATTTCCCCCCTTTCTTTCACTCAGAAGAAGTTCATTCTTTCCTTGCAAGTTCCAACATGGCAATCTTGGTCTCTTCC TCTAGAGTCCTTCTACCTATCCTGCCACTCTTTCTCGCATTCAATCTTGCAAGTAAGTGTTCTTGAAACCTTGAAATAAT CCCACTTACTTGAAACTTATGCACCACTCTTAAGATTCACAAGACCGAGTCGGGTGAGGTGAAGACAAAATGTTTTTCAA CAGTGCTGCTCTTAAGATTCGAACTGTTGACAGTTCAAAGTTCAAACAACCACTTTTTACCACTGGACGAGACGTAGCAA GTTGAAACTTAGATTTTAGATATTTTGTGTCTTTTAATTTGCTATTAACGTGAACAAGAAAGTGTAGTGATAATTGCCAC TATTATTCTGTGCAGATTCTGAACCGTTCATCGGCGTGAACTATGGCCAAGTCGCCGATAACCTACCACCGCCGTCAGCC ACGGCGAAGCTTCTCCAGTCCACCGCCATCGGAAAGGTCCGGTTATACGGAACCGACCCGGCGATAATCAAGGCCCTAGC CAACACCGGGATCGGAATCGTGATCGGAGCAGCGAACGGCGACATTCCGGCGCTCGCCTCCGACCCGAACTTCGCGAAAA CCTGGGTGAGCTCCAACGTCGCTCCTTACTACCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAGGTGATAACC TCCAATGACACCGGCCTCGTGAACCAGATGCTGCCGGCAATACAGAACGTGCAAAACGCCCTCGACGCCGCTTCGTTTGG TGGTGGCAAAATCAAGGTCTCGACGGTGCATTCCATGGCGGTTTTGGGTAACTCTGAGCCTCCTTCTGGCGGGAAATTTC ACGCTGAATACGACACCGTTTTGCAGGGGTTGTTGTCGTTTAACAATGCTACAGGGTCACCCTTTGCTATCAACCCTTAC CCTTACTTTGCCTACAAGAGTGACCCTGGTAGACCTGATAACCTTGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGT TGACCCAAACACCAATCTCAATTACATGAACATGTTTGATGCTCAGGTGAGTCTAAATATGAACTGTGATGGTTACAATT TTACTTGAAAATAGCTTATCGCGTGTTTATAAACTGTTTTGAACTTATTTTCATAAATCGCTCATATTAGCTTATGATAA GCACTTATTGCTTAGTTAAGTTGTTTTTACTTTATAGTAACATAAGTAATTATGTGATTTTACAATTTAACTTGCAAAAA TAAATTCTCTCATAAATGTATCCAAATTTAATCACTTAATTTCAACTCACTTTTGTCAAAATTTATTTTACCAAAATCAA TTCTATCACCACTATCGCTTATGACATGTTTATAAACCATATTGAGCTTATTTTCATAAATCAGTCGGATTCGCTTATGA TAAGCTCTTATTGCGTAGTTAGGTTGTTTTTTTTTGGTGCGTGCTTAGTTAGGTTGTTTACCGTACCATTATGTGATTTT ACAATATTACCTTACAAAAATAAGTTTTCTCATAAATGTATCCAAATTTTAATTTTAATCGCTAAATTTGAACTCGCTTT TGTCAAAATTGATTTTACCAAAATCATTTCTATCCACGATCAATTATTAGAATGTTGATCCAATCACACTCATAGTGTCT TTTAATTGTTAATGTATGTTATGATATGTGTCTTGTGCCATATAGGTGTTTAATGTTATGTTGTGTTGTGTGCAGGTGGA TGCTGTGAGGTCTGCGTTGGATTCTCTGGGGTTTAAGAATGTTGAGATTGTGGTGGCCGAGACTGGGTGGCCTTACAAAG GAGACAACGACGAGGTTGGTCCTAGTCTTGAGAATGCTAAGGCTTACAACGGTAATCTGATTGCGCACCTTCGATCCAAG GTTGGAACCCCACTGATGCCAGGGAAATCAGTGGACACTTACCTCTTTGCTTTGTACGATGAGGACTTGAAGCCAGGACC TGCTTCTGAGAGAGCATTTGGGCTTTACAACCCTGATCAATCCATGATCTATGATGCTGGCCTCTCCAAGCAACAACAGC AGAGTAGTAGCCCTTCCCCTGTGGTTGCCCCGGTATGGACATATATTTGAATTCCACTTGCATAACATGAGTACTTTAAT ATTATCTTACACTTCTATATATGACCATGGATTGATCCGATGCTGTCATTGATTGAGTAACCAGCTTAAATTGTTACATG GACATGAAGTATATCTGCATAAAGCATCATTTTTCTTAGTTCTTAATATCTTGAAGCTGTTCTATAGAGTAGTGCTTCTA GTCTAGAGACTAGTGTTTAACAAAATGTGTTTCTGAATTTGATTGAAGACTCCGGATGTGTCAAATTCTCCAGCGACTCA AACTCAAGTCCCAGTGGTGATCCCCCCGGTATATATATCTGAATTCCATGCATGATGACTATACTATTATCAATTTATCA TTTTTTTTCTATATATAACCTTTGATTAGTCGAATACTGTCATTGATTGATTAACCAGCTGAAATTGTTACATGGGCATG AACACCATATATGCATAAAGCATCATTTTTCTTAGTTGTCAATATCTTGAAGCTGTTCTAGAGTAGTACTTCTAGTCTAG AGACTAGTGTTTAACAAAATGTATTTCTGAATTTGATTGAAGACTCCGGATGTGTCGAAATCTCCAGTGACTCAAACTCG AGCGCCAACAGGCCCAAGTCCAACGCCAAATAAAGCGGAATCCTTAAACCGACACGACGCCCCCATTTTGCAATCTTTAA TCATGTTCACTCTTCTCATCTTAAAGCTGTTCTAGTGTAGAGTAGCTTGTGGTTGTATTTAATAATGTAATATTTCTTAA TTTTATTGAAGACTACTCCGGATGTGTCAAAATCTCCTGTGAATCCGACCCCAAGAGTTTCAAGTCCAACGAAACCAAAT AATAGTGCAACATGGTGTGTGCCAAAAGCAGGAGTGGCAGATGCAGAGTTACAAGCAAATTTGGATTATGCTTGCGGACA GGGGATAGATTGTAGCTCAATCCAACCAGGAGGAGCTTGCTTTGAACCAAACGCATTAGTGAACCATGCTGCATATGCCA TGAATCTCTTGTATCAAAAGTCTGGGCGGAATCCATTCAGTTGTGATTTCTCGCAAACTGCCACTCTATCAACATATAAT CCAAGTATGTACCAATGTGATTTCTGTTCAACATGCTTTCTGCCTTTCCCATCTTTGAAAGTTGAAACATTGTGGGGTTC GGGCCTTTTTTATTGGAAACATGTTGATAGATATCCCATAAGGGTGTCTACACTTTAAATACAAAGAAATAATAGGAAGA GCAGGGTTAAATTAATATATGATAAATGATATGATCTGATATGAAGATAGACAGAAAAGAATAAGTGAAAATATTATTGG GTTGTCAAAAAATTCAGAATTTTTATGTTGTTCTCTAGTGTGAGGCGAAAAAACTGAATAACTAGTAAGAGATTATTTAG TTAGGTCTCAAGTCTCAAGTCTCAATGCCAAATGCATTGCATGAAAGTTTGATTTGATGTAGTACATTGTTCCACAGGGC ACTTTTTTGAAAAAGTTATGATCACCGCATCTAGCTTAGATCCGGTCTAATATATATGAACATGGGATTTCTGATTTTTT TTTGCTAAATACTGCTTTGATCATCCCACTAAATCGATGTCCTCACTTTTCAATCTTTGCTCTTTGTTTATTTTATAGGT TACAATAATTGCGTGTATGCCGGAGGAGCTGCCTAACCTAAAAAACAAGAAAGTAGATACGTGTGGCCCTTTTTGTTTGT TTAAATTATTCTCTCTTAATGGCTAAGGAATGTTTTTGTTTTGGAGCGCTCTGAAGTAGAAGGGCTTGCATGAAGGTCCT CTATTTAGTGTTACCTTTTTTAATGTCTCTGTCAGAAGGAAGCTTCTGTGTTGTGTTGTCTATGATGTGGGTGAACTGTG AATTGTGATGTGTAGTATATGTATGTATGTTGAGTCATTATTTAAAATCTCAGGGTCCATGTATATACTATGTTGTACTG GTTCAGTAAAAAGTTTTTCTTTCTTAAGGTTTCGCCAAGTTTTCAGTTTAGTCTAATAAATTAAGTGTGCCACATACACT TAGTGCATGTTTGGAAGCTCGTTTGATGACAAACACTTATTCTTGATCTTAATGCAGTTTTAGCATATCATATACGGTGC ATTTGCCACATAAGAAAAGCCATCTGGTACAAACTACTTATGTGCTAGATATGGAGCAAACAAACATCACAGTATATCAT TTATCCTTTTGAGTTACCATGTCCTCTAAGTTCATTGGATAACACAATTTAGTGTACCGACCATTCCATATGTTATCTGC AAGAATCGCATTCACTGCATCAGTTGGATGAAACTGGTCCCACCAAATATAGTTGGAAGCATTCTTGCATGCCATTTCTG GTGACAAGCACATGAACCAGCCCTTGTACTTCCCAAATCCACAACAGGCTTCAGTCGTGATGTTAAACCCTAATTAGGGA ACACAAATCAGAGCTAAGATGTTATGACAAAGCTATGAACATGTTTGGAAACTCGTTTGAAAACCACGGTGAAGACAAAG TCATGGTAGACAGAAGCAAAAACTAAGAATTAGTTGCTTCTCTTCACTATGATTTTGGTTTCAATGTGGTTTTTGAACAA GTTTTCAAACATGCACTAATCTAATTCCAATATATTTAGAGGAAAACGAAAGCTATTACCATAAGGTTCAGGATTCTTGA AAATTTCCATAGAACCTTGAAACATGTCACAGAAGATGATATTGGCATCAGGGAGCTCCATGGTAAGATTTTCAGTCATG TATCTCATGAGAAAGTTAAATTCAATGGCCATGTCATTTATCTGCTCAACACATTCTCCATTTTCACTACCATACTGCCA TAAGTAATGAGGGGCACAACCAATAGGGGCAAGTCCCATGACCACCACTTTCCTAACATTTAAGTTATACAGGTTCTGTG CCATCAAGATTAACAT
CDS sequence (LotjaGi5g1v0017000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATCTTGGTCTCTTCCTCTAGAGTCCTTCTACCTATCCTGCCACTCTTTCTCGCATTCAATCTTGCAAATTCTGA ACCGTTCATCGGCGTGAACTATGGCCAAGTCGCCGATAACCTACCACCGCCGTCAGCCACGGCGAAGCTTCTCCAGTCCA CCGCCATCGGAAAGGTCCGGTTATACGGAACCGACCCGGCGATAATCAAGGCCCTAGCCAACACCGGGATCGGAATCGTG ATCGGAGCAGCGAACGGCGACATTCCGGCGCTCGCCTCCGACCCGAACTTCGCGAAAACCTGGGTGAGCTCCAACGTCGC TCCTTACTACCCCGCCAGCAACATCATCCTCATCACCGTCGGCAACGAGGTGATAACCTCCAATGACACCGGCCTCGTGA ACCAGATGCTGCCGGCAATACAGAACGTGCAAAACGCCCTCGACGCCGCTTCGTTTGGTGGTGGCAAAATCAAGGTCTCG ACGGTGCATTCCATGGCGGTTTTGGGTAACTCTGAGCCTCCTTCTGGCGGGAAATTTCACGCTGAATACGACACCGTTTT GCAGGGGTTGTTGTCGTTTAACAATGCTACAGGGTCACCCTTTGCTATCAACCCTTACCCTTACTTTGCCTACAAGAGTG ACCCTGGTAGACCTGATAACCTTGCGTTTTGCCTCTTCCAGCCCAACTCGGGCCGGGTTGACCCAAACACCAATCTCAAT TACATGAACATGTTTGATGCTCAGGTGGATGCTGTGAGGTCTGCGTTGGATTCTCTGGGGTTTAAGAATGTTGAGATTGT GGTGGCCGAGACTGGGTGGCCTTACAAAGGAGACAACGACGAGGTTGGTCCTAGTCTTGAGAATGCTAAGGCTTACAACG GTAATCTGATTGCGCACCTTCGATCCAAGGTTGGAACCCCACTGATGCCAGGGAAATCAGTGGACACTTACCTCTTTGCT TTGTACGATGAGGACTTGAAGCCAGGACCTGCTTCTGAGAGAGCATTTGGGCTTTACAACCCTGATCAATCCATGATCTA TGATGCTGGCCTCTCCAAGCAACAACAGCAGAGTAGTAGCCCTTCCCCTGTGGTTGCCCCGACTCCGGATGTGTCAAATT CTCCAGCGACTCAAACTCAAGTCCCAGTGGTGATCCCCCCGACTCCGGATGTGTCGAAATCTCCAGTGACTCAAACTCGA GCGCCAACAGGCCCAAGTCCAACGCCAAATAAAGCGGAATCCTTAAACCGACACGACGCCCCCATTTTGCAATCTTTAAT CATGTTCACTCTTCTCATCTTAAAGCTGTTCTAG
Protein sequence (LotjaGi5g1v0017000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAILVSSSRVLLPILPLFLAFNLANSEPFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIV IGAANGDIPALASDPNFAKTWVSSNVAPYYPASNIILITVGNEVITSNDTGLVNQMLPAIQNVQNALDAASFGGGKIKVS TVHSMAVLGNSEPPSGGKFHAEYDTVLQGLLSFNNATGSPFAINPYPYFAYKSDPGRPDNLAFCLFQPNSGRVDPNTNLN YMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDNDEVGPSLENAKAYNGNLIAHLRSKVGTPLMPGKSVDTYLFA LYDEDLKPGPASERAFGLYNPDQSMIYDAGLSKQQQQSSSPSPVVAPTPDVSNSPATQTQVPVVIPPTPDVSKSPVTQTR APTGPSPTPNKAESLNRHDAPILQSLIMFTLLILKLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| PANTHER | 14 | 368 | 355 | 4.8E-213 | – | |
| PANTHER | 14 | 368 | 355 | 4.8E-213 | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 437 | 411 | - | – | |
| Gene3D | 29 | 360 | 332 | 1.3E-121 | – | |
| Pfam | 30 | 348 | 319 | 1.6E-81 | ||
| SUPERFAMILY | 30 | 349 | 320 | 1.46E-89 | ||
| MobiDBLite | 351 | 413 | 63 | - | – | |
| MobiDBLite | 351 | 416 | 66 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0017000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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