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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0017500 |
| Transcript ID | LotjaGi5g1v0017500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lipase, putative (DUF620); TAIR: AT1G75160.1 DUF620 family protein (DUF620); Swiss-Prot: sp|Q47LE7|NUOD_THEFY NADH-quinone oxidoreductase subunit D; TrEMBL-Plants: tr|A0A072VF85|A0A072VF85_MEDTR DUF620 family protein; Found in the gene: LotjaGi5g1v0017500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:3466030..3469531) extracted from Lotus japonicus Gifu genome v1.2.
CCTTATTGTTGCATGCATGTTGATGTTACACACTAGATTTCCGTTAAGAAGGTTGGTAATGAATCCCTAACGCAAAGGGG ACGAAAAAAGAAACGATATGCCGGTAAAGCCGCAGCCAAACGCACCTCACATCTCCTTCTATAACGCAACACCCTCATTT CTCATTTCTCACATTAGCGACGAAAAACAAGAAGAAGAAATTGAACTTTGAAAATCGATTAATCGATTGAATGAGGAAAC TGTGTCCGAATTTCGACAAGGTGGATGGATTGGACACGGTGCTGGAGGTGCCGATTCCGGAGGACATGTGGACCAGCATC GGTAACAACGGCGCTAACCGCTGGCAGAACCTCCGTGCTCTCATGAGAGCTCAGATTTCCGCCGATAACGCCTCTCATCT CTCCGCCGCATCTAACCATGAATTCGTCGCTTTGTTGAAGCTCGTTGGTTCACCGCTAATCCCTCTTCACGTTCAATCCG ATCACACCTTAACTCGCCCCCTCAAAGATCCTTCCATTGTAAGCGTAGTTCGTTCTTTAATTTCAATTAATTTCATCTAG CAGCATGCATTGCACAATTAATTGATCGATTGATAGATTTCGGCATAGGATTATGAATGCAAGCACTAGCGTTTTTAGCA ATTAGAATCAAGGGATTATTAGTTAAACTATAATTGTTTATTACATTACGAATTAGCTGCAAAAACCTCTAAAACCTTGA AATTGATTGTATACTTTGATACCCTGAATCAGAATGCACAAGTGATTAAATGATTTTCTTGGTATTGTGAGTCTTTGTGG TGCAATTGGAAGAATTAGGCTGCATTTGAAATTATCTTATAGAATAAAATGTTTGGGAAAATTTATGAAAATAGCATATC AGTTACATGGTATGTTTGAGTATTGAGTAAACAGCTTGATTAAGCACTTATGACAATAAGCATTTATCGCATAGCTTATG CATAAACTAATTTGAGAAACTTATTGAAATAAACTAAAAATATGGAATATGTAAGCATAAGCTTCTATTTATATATAAGC TAATTTGAACGCTTCATGAAAATACACCCGAAAAAGCTTATAAATAGGTTATGAGCTATTTACGTAATATCTCTCAAATA GTGGCATAAGTGCAAATTCTATAAGATAAAACTCAAGTAAGCTATTCCAAACCGGAGTACATAGATTTTGAGGTTATTCA TAACTCACTCAGATTTAGCTTATGAATGAACACATACATGCCTAAAAGTTATTTTAAGCTTATTCTATTAAGCTTCTCAA ACTATCTTATCTTATGAATAAGTGCTTGTGTGCTTATGTAATAAATGATTATTGTCATAAGTGCTTACTTAAGTTATTTA ACCAACATGTTTATGTTTCAAATTGTGGTTATATATCACGATCTTTATCTTGAGAAATATTACTAGCAAATGATTGGCAA TGCTGCAATTAGGGTTGAGACTGCATATGGGAAGCTAGAATTAGAATGTTCATATGAAGTTTTCTAATTACAATATATAA TATGACTGATTTGTAATTAAAGAATAAGTTGTTTCTTCTTAATTCTTCTTGAAATGAGTAATTAACAAGTTATAGTTTGG TTGGATCTTGTGCAGGAAGCTTCGACTGCAAAATATATAGTGCAGCAGTACATAGCTGCGACAGGGGGAGTGGGTGCATT GGATTCACTGAAAAGCATGTATGCAGTGGGACAAGTGAGGATGTTTGGGTCGGAGATGCGTCCAGGAGATGATAGCACTC ACCCAATAGGGAGGGCTGAAGTGGGAGGTTTTGTGCTGTGGCAAAAGAACCCTGATTTGTGGCACTTTGAATTGGTTGTC TCTGGTTTCAAGGTTAGTGCAGGAAGCAATGGAAAAGTAGCCTGGACCCAATCTTCTTCTCAACCTTGTCATGCAAACAA AGGCCCTCCTAGGCCTCTTCGCCGCTTCTTTCAGGTACAGCACTAAATCCCTAATACATTTTCACACCAATTGACAATGG TACTGCTTACTTATAAGAGGGTATTAGTTTGTTAGCAGCTAGATAGATATTGAACCATATTCATGTATTTTTAATAACTG CATTAACTTTGCAGGACAACTGTTTGATCATTGATGATATGTTATTCAGTAGAACCTCATAACTGTGTGATTTGAAGTTC ATGATACTTAATTCACATGCTTTTGCATGCTTGTCACCAACATCCTTTAATAACATGTTTGGTTTCTCAGTCAAATGCTT TAAATTACTTATAGTTAGAAGCTACAAGTTTTAGTGTATAATGCGATGATTTCTACATTAGTATGATAAGTGATTCAAGA AGAAGCTGCTTACAGTAGCTTTTGTGCGATGAGAAGTGATTCTGGAATATTTAAACATGCAACCAAACATGCTACAGCTT CTGAGTAAACATGCATTGAGTTTTGTGTAAATAGTGAAACCAAACCTTCGCTAAGTGGAAGTTAAATTTTAACTCAAATT AAATGTGACTGTTTTCGGATATTTGATTGACCACATTAGCCAGTTCATATATGTATATATATAACCATGTTATAGAGTAA CTGGGTCAATCATTCATTGGCTTGCCACTAGAATTTTAGCTTTATTAGTAAGGTTATGAGGGGGTTAAATCAAGAATTGT TTTCTAACTCTCTTTGTTTATTTTGTGCTTGTTATTACCAGGGGCTGGACCCAAGGTGCACTGCTAACATGTTCCTAGAC GCTGTGTGTGTTGGAGAGAAAACTATCAACAAAGAAGATTGTTTTCTCCTCAAGATAGAGACTGCACAAGACATCCTCCA AGCTCAAAACACGTCCAACACAGAAATCATAAGACACACTGTGTGGGGATACTTTAGCCAACGCACGGGATTACTAGTCA AATTTGAGGACATAAAATTGGTAAGAATGAAGCCTTCTAAGGGAGATGACTCTGTTTTCTGGGAAACAAGCATTGAGTCT GTCATTGAGGACTATAGGTACATCGATGGCATTAAGATAGCGCATGGTGGCAAGACGGTGGCCATTTTGTATCGGTACGG CAAGGCGCATAATCAAAAGCGGAGAATTGAGGAGACATGGAGGATTGAAGAGGTTGATTTTAACATTTGTGGGTTGTCCA CGGATTGCTTCTTGCCTCCTTCTGAGGTCAAGAGGGAGCAGGATGGTGCAGAGCAAGTAGTAGTGTCATAGGAATGAGTT AGGATTTTCCTTCCTTTTTGTCCTCATTTTCACTCTCTCAACTTGTCAACGACAACAGATTTGTGTACATATTACATAGA TAGGCATAGGTGGGTGTACAAAATTACAGTAAATACTATTCCTGATGGTCCTTGATTCAATCTTTAGCAGGAAGTTTTTT TGGCCTGCATTGGAATTTTGACAATGCATGTCAGTACTTTGTGATTGATCTTATAAATGAATGAAAAATTTCAAGGAGGA TAAAGAAGAACTATATTTTAGCTCAAACTAAAGTTGTTTAGTCTAATGACTTAATATGTTGG
CDS sequence (LotjaGi5g1v0017500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAACTGTGTCCGAATTTCGACAAGGTGGATGGATTGGACACGGTGCTGGAGGTGCCGATTCCGGAGGACATGTG GACCAGCATCGGTAACAACGGCGCTAACCGCTGGCAGAACCTCCGTGCTCTCATGAGAGCTCAGATTTCCGCCGATAACG CCTCTCATCTCTCCGCCGCATCTAACCATGAATTCGTCGCTTTGTTGAAGCTCGTTGGTTCACCGCTAATCCCTCTTCAC GTTCAATCCGATCACACCTTAACTCGCCCCCTCAAAGATCCTTCCATTGAAGCTTCGACTGCAAAATATATAGTGCAGCA GTACATAGCTGCGACAGGGGGAGTGGGTGCATTGGATTCACTGAAAAGCATGTATGCAGTGGGACAAGTGAGGATGTTTG GGTCGGAGATGCGTCCAGGAGATGATAGCACTCACCCAATAGGGAGGGCTGAAGTGGGAGGTTTTGTGCTGTGGCAAAAG AACCCTGATTTGTGGCACTTTGAATTGGTTGTCTCTGGTTTCAAGGTTAGTGCAGGAAGCAATGGAAAAGTAGCCTGGAC CCAATCTTCTTCTCAACCTTGTCATGCAAACAAAGGCCCTCCTAGGCCTCTTCGCCGCTTCTTTCAGGGGCTGGACCCAA GGTGCACTGCTAACATGTTCCTAGACGCTGTGTGTGTTGGAGAGAAAACTATCAACAAAGAAGATTGTTTTCTCCTCAAG ATAGAGACTGCACAAGACATCCTCCAAGCTCAAAACACGTCCAACACAGAAATCATAAGACACACTGTGTGGGGATACTT TAGCCAACGCACGGGATTACTAGTCAAATTTGAGGACATAAAATTGGTAAGAATGAAGCCTTCTAAGGGAGATGACTCTG TTTTCTGGGAAACAAGCATTGAGTCTGTCATTGAGGACTATAGGTACATCGATGGCATTAAGATAGCGCATGGTGGCAAG ACGGTGGCCATTTTGTATCGGTACGGCAAGGCGCATAATCAAAAGCGGAGAATTGAGGAGACATGGAGGATTGAAGAGGT TGATTTTAACATTTGTGGGTTGTCCACGGATTGCTTCTTGCCTCCTTCTGAGGTCAAGAGGGAGCAGGATGGTGCAGAGC AAGTAGTAGTGTCATAG
Protein sequence (LotjaGi5g1v0017500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKLCPNFDKVDGLDTVLEVPIPEDMWTSIGNNGANRWQNLRALMRAQISADNASHLSAASNHEFVALLKLVGSPLIPLH VQSDHTLTRPLKDPSIEASTAKYIVQQYIAATGGVGALDSLKSMYAVGQVRMFGSEMRPGDDSTHPIGRAEVGGFVLWQK NPDLWHFELVVSGFKVSAGSNGKVAWTQSSSQPCHANKGPPRPLRRFFQGLDPRCTANMFLDAVCVGEKTINKEDCFLLK IETAQDILQAQNTSNTEIIRHTVWGYFSQRTGLLVKFEDIKLVRMKPSKGDDSVFWETSIESVIEDYRYIDGIKIAHGGK TVAILYRYGKAHNQKRRIEETWRIEEVDFNICGLSTDCFLPPSEVKREQDGAEQVVVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 376 | 376 | 6.7E-201 | – | |
| PANTHER | 1 | 376 | 376 | 6.7E-201 | ||
| Pfam | 124 | 362 | 239 | 5.2E-113 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0017500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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