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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0022900 |
| Transcript ID | LotjaGi5g1v0022900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT2G26510.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|Q8GZD4|NAT3_ARATH Nucleobase-ascorbate transporter 3; TrEMBL-Plants: tr|A0A151RMM3|A0A151RMM3_CAJCA Nucleobase-ascorbate transporter 3; Found in the gene: LotjaGi5g1v0022900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:4083066..4088915) extracted from Lotus japonicus Gifu genome v1.2.
ATTCAACCGAAACATTATTAACTCAGATCAGATTCATCAAAGTAAATGAGATACAAATGTAAATGCTCCCTTCACAACAC GACAATTTAATAACCATAAAACGCAACCTTAACTCATTTACTTCACTATTTCCTCACATCCTTCCTTGTACTTTTCTGGA AATCCACACTACTCTACTCTTTCATTTCATTCATTCAAGCTTTTTATTTTTATTTTTATTTTCATCAACTTTTATTCTTT TTTCTTCTTTCCTTTCTTTTATATAAACACCATTCTCTTCTTCATTCAAAGCCTTTTCACTTCAAAAAAACTCTCCTAAT TTTCTCTCTCTGTCTCTCAGAATTTGGCTGCAAATGGGTCATGAGACTGATAACCACCACCACCATGCTCCGCCGCCAGT TCAGGCTCCACCGCCAGGTCCACCACCACCGAACTTTGGACTTTCCAGGGGACCCACTTGGGCTCCTGCTGAACAACTCC TGCAGCTGGATTACTGCATCCACTCCAATCCTTCATGGCGTTAGTCTCTCTCTCTCTCTCCCTCTCTCTCCCTTTTGTTT TTGTTTTTCCATTTTTTATTTGATTTTTTTATGCTATAAGCTTTGAAAAAGTTAAGCTTCATGTCAAAAGCAGTTAGGAA TCTCATGTCAAACCTTACTCAAAAGGGGTTTGTTTTATTTTTTTTTCAGCTGAATTCTGTGTCTGTGTATCAGATTGCTT TTTATTACCTTTATTCCAATCTGATTCTCTTATAAAAAAAGTTGCTTTGTTTTTTGTTTTTGTCATTTGTATGAATCTTT CTTTGTGATTCTGTATGTGAAATTGGTATCTGAAAGGAACCCATTTCTGAGTATTCTGTTTTGGGTCTTAAAGTTTCACC TTTTTTGCAGCGGAAGCACTGCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACTGTTCTGATTGCTACCTC CCTGGTGAATCAGATGGGTGGGACTCATGTAAGTGCTGTTTTGATTTGAGGTAGAGAGCCCATTTGGATACGGACCAAAA AAGCGCTTATGGGAGCTTATCGACTAGAAAAGTCATTATTAGATAAGCTCCGATAAGTGCTTTTTGGTTCGCATCCAAAC AGGTTGGAAGAAGCTTGGTTTTTTATTTGTTGCTTAGTTTTGTGCTGAGTGTGTTGTTGCCATTCTCTTGCAGGGTGACA AAGCTCGTGTGATTCAGACTATGTTGTTCATGTCTGCCATCAACACTCTGCTCCAGACTTGGTTCGGGTCGAGGCTTCCA ACTGTGATGGGTGGATCGGTTGCTTACATTCTTCCTGTGATGTCGGTCATAAATGATTATACTGACAAGACGTTCTCATC TGAGCATGAGGTTTGATCAATGACAATGTTTCTTTTGAAGTAAATTCATTCTTATTGTATTGATTTAATTGCTGTTGGAA CTCAAGTGTGCTAAATTCAATTGTACTAGATTATTCAAGATGTTATTTTTTGCTCCTTATTCTTCATGTGTGATTGATTC ACATTTTTGCACCCAGAATTGATCGACTTTGAAGCTCCTTTAGCTTCTGTCCTAATTGTGCTTACCAGGGTTTTAAACTG CAGTTGCGATCACTTAAATAGCGGAACTGAGCACAAAAGCGGTTTGATGCTGTCACAATTGCAGGCGCAATGTCATTTCA GATACTCAAAACACTTTTACGATGTAGCTTCAATTGCAGTTGCGGACTGCCGACTGCAATTTTAAACCCTGCCTACTTTC AGGATTTTAAATGGCGGTTGCGGTCACTTATATCTTGGAACTATGCACAAATGCGGGCTGATGCAGCCGCAATTGGGGTC GCGATGTCTTTTTCAGAGACTCAAAAGACCTTTTGAATTGCAGCCTTAATTGCAGTTGCAGACAGCAATTTAAAACCCTG CCTACTTCAAAGCCCCTTCTTTTGTTTGTTTAAATGCATTGTGCTCTCTCTGTTCCAAATTATGTACCTTGGTTTTGTTC TAATATTTGGATTTTGTTGCTTTTTCCTGGAACTCAACACATTCTCACTTCTGTTTTGTGTGAGCCTTATTATTTGTTAA CTGAATTGCCTTCTCCAATATGAAAATTGGTGATCCAAACTGCTAATGAATTACAAAATTCGATCTTGTAGAGGTTTACC TACACAATCAGAACAGTTCAAGGATCCCTGATTGTATCTTCTTTCGTCAATATCTTCCTTGGGTATAGCAGGGTATGGGG GAATTTAGTAAGGTAAATTTATGTCAATCTTCAATATTAATTTGTTTCCCCTTTTTCTTTCAAAAAATTTAGTCCATATC TAAAGCTGCATTAAAATTAACAGCCTTAGTTTTTTCATTTTTCATTTATTAACATCTTTTGGTGATTTTTTTTATCAGGT TGTTTAGTCCCATAGTCATTGTTCCTGTAGTATGTCTGGTGGGTCTTGGCGCGTTCATGAGAGGCTTTCCATTGGTAAAG ATTCCTAATACACTTTGAAGAATTTCTTATCATAATAAAAATTATAGATAGAAAGAGTTTGTGAACTCGATTATCTTTCT CTCTGCAGCTTGCGGATTGCGTGCAGATTGGACTACCTATGCTCATTTTTCTGGTTTTAATGCAACAGGTTATATATATC TCATCTGAAGCAATCTCTTAGATTTTTATTTTCGTCTACTCTCAATATCTAATTTTTTTTTCCTTTTCCCTGGTCCTGCA GTATCTGAAGAAGATTCATCCTAAAACTCATAATGTACTTGAGAGGTATTCTATTCTTCTTTGCGCCGCTCTCATCTGGG CTTTCGCTGCTATCCTTACTGTGGCCGGTGCATACAACAATTCCAAAACAAAAACCCAGTCGAGTTGTCGCACGGATCGC TCATTCCTGATGTCTTCTGCTCCTTGGTATGTTCAGAAGTTATGGAATTTTTAACAGTTTGTTTCAGCTCTTTGTGGAAT GTTGTAGTTGTAACATTAATATTGTTTTTATTACAGGGTTAAAGTTCCATACCCATTTCAATGGGGTACCCCCATATTCA GTGCTGGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCTCTTCTGCTGAGGTCTACCAAATCTTCCTTTGTGGTTTT AGTTCTATAATTTTTTCTGATAATTTCACATGTCCATTCTCAATTCTGAGGTGTGTTAGAAATATAATATAAAACCACTT ATGTTCCATCCAACCGCAAAATATTTTAGAATAGTTGGTTCGTGATATGGTGTTAAAGTTTCAATGACCAAGTGATCTAG AGTTTGATTCTCATTGCCCTAATTATTATAATAAAAAAAGTTGAATTTGACAAGGCATTTTAAATCTCAATTACTTCACC AACAAGATGTTGGTCTAGTGGTAGGCAAGCTAAACCACTGTAAGGGTGAGAACAAAAGTTTGAACCTCAGGAAAGTCATC TGTTGGGAGAGACTGTCACAGATTCCCAAACGGGATTAGTCTTTCCCTCAAAACAGGGTGGGGGACACTCGGTAAAGACA AAAAAAAACTGACTACTTCACCCTCTACAAAATGATCTATTTGTTTTTGCATATATTACCATTATTTTGAATCTGTTGTC ATCAACTGGTGATCTAATCTGAATCTCAAATGAAAATTTCAATGCAGTCTACTGGTACATACTTTGCTGCCGCAAGGCTT TCGGGTTCAACACCCCCTCCTCCACATGTGATCAGCCGAAGTATCGGGTTGCAGGTAAAGTTTTTATTTTCGCGCCTCTT TACAATTAATTTAATTGTTCTTTCATATTGTTACAAAACCTTAAACTCCTGCTTTGTCACCCCATTAAATGCAGGGCCTT GGCATGCTAATTGAAGGCATTTTTGGTTCCGTTGTTGGTACTACTGCATCTGTGTAAGAAAACAATTCTCTTAAGAACTT TTAGTAATCTAGATTGGTGAAATGTATCTTATAGTTTCTTAATATTTGGGTTTGACCTAACTCTTAGTAACCCGTGTTTG TGAATTGTCATTTTTCGTTTCTTACTGTGCTCCATGCACGCCCTAGGCTTTTATGGTTAATATTTATTATACATCGATTT ATTGATTATTTGCCAATTGTTAATATTTGAAAAATCTGTTGTATTTTTAAATCTTGGATTCATGGTTGTTTATAGTAAGA GCTTTGCAAAAAGAGGAATGTTAGTTCACATTTATGGTTAAGAATTTTCTGTGTTCATTGCAGTGAAAATGTTGGCCTAC TTGGTCTAACTCATATAGGGAGCAGAAGAGTGGTGCAAATATCATGTGGCTTCATGTTCTTCTTCTCTATTTTTGGTACT ATATTCTACTTGAAACCTTGTAAAGAGAGTTTCCTTCCAGTTTTTCATTTCTCATGGAATTCATTTTTCCATGTCTCTTT CAGGAAAATTTGGAGCCTTTTTCGCCTCGATTCCCCTGTCAATATTTGCTGCTATATACTGTGTTCTATTTGGTATTGTG GGTAGGTGCCACTGCTATTACTTAAATAAAATGGCAGCCTTGTGCACAAAAGCTCCGGCTATGTGCAGGCCGGGGAAGGG TCCGACCACTTGGTTATGCAGCCTTACCTTGTTTTTATACACAAGAGGCTGTTGCTAGGACCTAAACTCGTGACCTCTGT CATATGACAACAACTTTTGCCACTGCACCATGCCAAGGCTTCCCTTCGCTGCTATTACTTAAATTGTTATAAATTAACCA GTAGATGCTAACCTTCTCTCTGTATCTGTGTCTCTCTCTTGCAGCTGCTATTGGGATTTCATTCATACAGTTTTCAAATA ACAATTCCATGAGAAATATTTATATTCTTGGCTTATCCTTGTTTCTTGGAATCTCAATCCCACAATATTTCATCATGAAC ATTTCACCAGATGGCCGTGGTCCAGTTAGAACAAATGGTGGATGGGTAAGCAACTCGTGAAGTCTTATAATTCTTTATTC CACATGATTATGCATAAGCGCTTAGTATATATTTTGTTTCACGTTGCTCATCCACATAAGTTCTTCTAATCTTCTCTAAC GTGATTTTTCATCATTTGAACATGTTCGGGTAAAATTCTTAGAAACACTTCAGGCTGACAAAATCATGTTGAGGCCAAAG TAAAAAGACCAAGCTTTTGAGTTAACATGAAACTGATTTTAGTTGTTCTCACAACAATTATATTATTTTCCTATGAAGTT AAGTTTTATAGTAAATGTATCCAAAACTTTTACCTTACTATCCACAGGACCTCAATTACTCCTCTTAATGCAAAACCAAA CATGTTTTCACTTGACTATTTGTTTGCTTGATTTCTGTGTTAAGTGCATTTATATATCTGATTGGTGGACTTTTTCTTGT GTGACAACAGTTTAATGACATTTTGAATACCATATTCTCTTCTCCCCCAACTGTGGCCATAATCGTTGGGACTGTTCTTG ACAACACACTGGATGTCAAACACAAAGAGGACGACAGAGGACTTACATGGTGGCGTCCTTTCCAGCATAGGAAGGGAGAT GTTAGAAATGATGAGTTTTATCGCTTTCCTCTAGGATTAACTGAATATATTCCTTCAAGGTTCCGGCCATGAGCATAAAT GTTAAATCTTCATGCTGAATGACCTTGTTAAATATGGACAAACAAAATTATCTATTAAAGGCAAATAGCCAAATTTTACC TTAGCTTATAAAAAATATTAAATGGATTCTTGTGACATACTTAGTTCTTTATATCTGTTGGTGCGGATCATCAAGCGAGT AGATCAAGTGACGTGCAATTGTTTTAACTTAAGTAGATGGCTCGTGTTTGAGTCACCGTAAGTGTGGTTACATTAAATAT TTGATAGTTG
CDS sequence (LotjaGi5g1v0022900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCATGAGACTGATAACCACCACCACCATGCTCCGCCGCCAGTTCAGGCTCCACCGCCAGGTCCACCACCACCGAA CTTTGGACTTTCCAGGGGACCCACTTGGGCTCCTGCTGAACAACTCCTGCAGCTGGATTACTGCATCCACTCCAATCCTT CATGGCCGGAAGCACTGCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACTGTTCTGATTGCTACCTCCCTG GTGAATCAGATGGGTGGGACTCATGGTGACAAAGCTCGTGTGATTCAGACTATGTTGTTCATGTCTGCCATCAACACTCT GCTCCAGACTTGGTTCGGGTCGAGGCTTCCAACTGTGATGGGTGGATCGGTTGCTTACATTCTTCCTGTGATGTCGGTCA TAAATGATTATACTGACAAGACGTTCTCATCTGAGCATGAGAGGTTTACCTACACAATCAGAACAGTTCAAGGATCCCTG ATTGTATCTTCTTTCGTCAATATCTTCCTTGGGTATAGCAGGGTATGGGGGAATTTAGTAAGGTTGTTTAGTCCCATAGT CATTGTTCCTGTAGTATGTCTGGTGGGTCTTGGCGCGTTCATGAGAGGCTTTCCATTGCTTGCGGATTGCGTGCAGATTG GACTACCTATGCTCATTTTTCTGGTTTTAATGCAACAGTATCTGAAGAAGATTCATCCTAAAACTCATAATGTACTTGAG AGGTATTCTATTCTTCTTTGCGCCGCTCTCATCTGGGCTTTCGCTGCTATCCTTACTGTGGCCGGTGCATACAACAATTC CAAAACAAAAACCCAGTCGAGTTGTCGCACGGATCGCTCATTCCTGATGTCTTCTGCTCCTTGGGTTAAAGTTCCATACC CATTTCAATGGGGTACCCCCATATTCAGTGCTGGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCTCTTCTGCTGAG TCTACTGGTACATACTTTGCTGCCGCAAGGCTTTCGGGTTCAACACCCCCTCCTCCACATGTGATCAGCCGAAGTATCGG GTTGCAGGGCCTTGGCATGCTAATTGAAGGCATTTTTGGTTCCGTTGTTGGTACTACTGCATCTGTTGAAAATGTTGGCC TACTTGGTCTAACTCATATAGGGAGCAGAAGAGTGGTGCAAATATCATGTGGCTTCATGTTCTTCTTCTCTATTTTTGGA AAATTTGGAGCCTTTTTCGCCTCGATTCCCCTGTCAATATTTGCTGCTATATACTGTGTTCTATTTGGTATTGTGGCTGC TATTGGGATTTCATTCATACAGTTTTCAAATAACAATTCCATGAGAAATATTTATATTCTTGGCTTATCCTTGTTTCTTG GAATCTCAATCCCACAATATTTCATCATGAACATTTCACCAGATGGCCGTGGTCCAGTTAGAACAAATGGTGGATGGTTT AATGACATTTTGAATACCATATTCTCTTCTCCCCCAACTGTGGCCATAATCGTTGGGACTGTTCTTGACAACACACTGGA TGTCAAACACAAAGAGGACGACAGAGGACTTACATGGTGGCGTCCTTTCCAGCATAGGAAGGGAGATGTTAGAAATGATG AGTTTTATCGCTTTCCTCTAGGATTAACTGAATATATTCCTTCAAGGTTCCGGCCATGA
Protein sequence (LotjaGi5g1v0022900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHETDNHHHHAPPPVQAPPPGPPPPNFGLSRGPTWAPAEQLLQLDYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATSL VNQMGGTHGDKARVIQTMLFMSAINTLLQTWFGSRLPTVMGGSVAYILPVMSVINDYTDKTFSSEHERFTYTIRTVQGSL IVSSFVNIFLGYSRVWGNLVRLFSPIVIVPVVCLVGLGAFMRGFPLLADCVQIGLPMLIFLVLMQQYLKKIHPKTHNVLE RYSILLCAALIWAFAAILTVAGAYNNSKTKTQSSCRTDRSFLMSSAPWVKVPYPFQWGTPIFSAGHVFGMMGAALVSSAE STGTYFAAARLSGSTPPPPHVISRSIGLQGLGMLIEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISCGFMFFFSIFG KFGAFFASIPLSIFAAIYCVLFGIVAAIGISFIQFSNNNSMRNIYILGLSLFLGISIPQYFIMNISPDGRGPVRTNGGWF NDILNTIFSSPPTVAIIVGTVLDNTLDVKHKEDDRGLTWWRPFQHRKGDVRNDEFYRFPLGLTEYIPSRFRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 62 | 62 | - | – | |
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 6 | 550 | 545 | 0.0 | ||
| PANTHER | 6 | 550 | 545 | 0.0 | – | |
| MobiDBLite | 13 | 31 | 19 | - | – | |
| Pfam | 58 | 461 | 404 | 6.5E-69 | ||
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 63 | 82 | 20 | - | – | |
| Phobius | 83 | 93 | 11 | - | – | |
| Phobius | 94 | 112 | 19 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 113 | 117 | 5 | - | – | |
| Phobius | 118 | 137 | 20 | - | – | |
| Phobius | 138 | 148 | 11 | - | – | |
| Phobius | 149 | 170 | 22 | - | – | |
| TMHMM | 153 | 172 | 20 | - | – | |
| Phobius | 171 | 181 | 11 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 182 | 200 | 19 | - | – | |
| Phobius | 201 | 206 | 6 | - | – | |
| TMHMM | 205 | 222 | 18 | - | – | |
| Phobius | 207 | 227 | 21 | - | – | |
| Phobius | 228 | 241 | 14 | - | – | |
| Phobius | 242 | 264 | 23 | - | – | |
| TMHMM | 242 | 264 | 23 | - | – | |
| Phobius | 265 | 384 | 120 | - | – | |
| TMHMM | 297 | 319 | 23 | - | – | |
| Phobius | 385 | 407 | 23 | - | – | |
| TMHMM | 385 | 407 | 23 | - | – | |
| Phobius | 408 | 412 | 5 | - | – | |
| TMHMM | 411 | 433 | 23 | - | – | |
| Phobius | 413 | 432 | 20 | - | – | |
| Phobius | 433 | 443 | 11 | - | – | |
| Phobius | 444 | 463 | 20 | - | – | |
| TMHMM | 446 | 463 | 18 | - | – | |
| Phobius | 464 | 482 | 19 | - | – | |
| Phobius | 483 | 502 | 20 | - | – | |
| TMHMM | 483 | 502 | 20 | - | – | |
| Phobius | 503 | 552 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0022900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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