Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0031900 |
| Transcript ID | LotjaGi5g1v0031900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT3G19540.1 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); Swiss-Prot: sp|B3PC08|GATA_CELJU Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A0L9V1J6|A0A0L9V1J6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0031900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:5288501..5292398) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAGAAAAGCTTTAAGTATTGGGCAAATTGTGGTGTGAGAATGAATCCAGTGTAGACCACAGTTTACTTACCTGTCTG GCGGCAGAAACACCAAATCAGTTGCTTCACACACACCTTTCTTTCCCTTCTCTTTTTCACTAACAATTTGTTTCCTTCTT TTCTCATAAACCCACTGTGCTGTGCAACAAAACACCCTCATTTGATTCTCTTCTCTTCTCTCTCTCTTTTCTTTTCTCTT TAAAAAAATAAAAAATAATAATCTGTTTATTTTATTTTATTTTGTTTTTATTTATTTATAACTGTCAGTGCCAGTGTTCC CCCTTTCTTCCCTCACTCACTGTTCTTCTGCTCAGAAAATTTGTAGAGGGAGTGGCAAAGTGGTAATAATGGAGAGAAAG CAAGGGTTCTTCTCGGCGCTCAAGGAGGAGGTGGTTCGCGGTCTCTCGCCGGCGAGGTCACGGGCCAAGAGTCCGGCGAG GAGCGCTTCTCCGATGTCGGGGTTACTCCGGCGACGGAGGAAGCACCACGCTCCGCCTCCGGAGATTTTCGTTACGAGAT CGGGGAGTCTCAGGCCGGCGGAGGCGTTGTCGCCGTTGAAGGAGGGTCCCGACGGAACTGACGGCCAGTGCTCCAGCAGA GGGGAAGGACGGTGGGGGCAGTGGATGAAGGGACCACTGGCTAGAGCGCCGTCTGTTTCTTCTTCTTCGTCGTCGTCTTC GGGTTCTTCTTCTGCTGCCGCATGCAAAAAGTCCGATCTGAGATTGTTGCTTGGTGTGTTGGGTGCTCCACTTGCTCCTG TTCATGTCTGCACCACTGACCCTTTTCCTCATCTCAGCATCAAAGACATACCCATTGTTAGTCTTTCTCTCTGTTCTGTT GTGTTGTTTTGTTTTTGGGTTGGAGTTAAGTTTTTGTGATGATATTCATGTTCATTGATCAGTGAAATGGTCAAATTAGT TTGGGTGTGTGATGATTTTTCTGTTCTTTGTGTGGTATTGTTACAGATCAAATAGGCTTATGGTTCATACATATCATGTT TCTATATTCCCATTTGCTAATTCTAAGTTCTAATGTCTAGCCTGGAATAAATGGGTTTTTGTAATGGGTGATATGAGAGA ATGATTTTGATTTGTGATGACAAGATGCAATTGGAAGATTAGGGAATATTCTGGATTATGGTAACCATGTGACTGGTTGG TGGTTTTGTGTCATGGGCTCATGGGGTTATATTTAGAACATTTAATGTGTTTATGGTGTGTGTTGTGTCTGTATTTGCAG AAGAGGTAATAGGGGCTGGTGTTACTTTTGATCTTGAAAAGGGTTCTGTTCCTTTGTTTTTATTAGATTTATTGTTGTGA TATAATGTGGTTTTGTTGGGTGTTGTTGTTGCAGGAAACTTCTTCTGCTCAGTACATACTGCAACAGTACATTGCTGCTT CTGGAGGGCAAAAGCTTCAAAATTCCATCAACAATGCTTATGCCATGGGGAAGGTGAGGATGATAGCCTCTGAGTTTGAG ACTGCGAACAAGGTCACTCGCAACAAGAACTCCTCCAAAGCTGCAGAGTCCGGTGGGTTTGTCCTGTGGCAGATGAACCC AGACATGTGGTATGTGGAGCTTGCTCTTGGTGGCAGCAAGGTTCATGCGGGTTGCAATGGGGAGCTTGTGTGGAGGCACA CGCCATGGCTCGGTGCACATGCAGCAAAAGGGCCAGTGAGGCCTTTGAGACGTGCCCTTCAAGTGAGTTTACCCCCTACA TTCAATACTTGTACTACTCTTTTTTTCTACCTTTAAGTGCATGCTTTATTGCTTTTGATAAAATTGATTGTGAAAAAAAA AAGAGTTGAAAGTAATGTGATTCTTTTGGATAGGCTTACTATAAAAGTGATTTTTTAGGAAAATATAAATGTCTTGTGAG GAGCTAAAATCACTTTCATGCTTACTCAAGAGCTTGGTCTTTTTGCTTTGACTTCAATGTGATTTTGTCTGTCTGAAGTG TTTCTAAGAATTTCACTCAAACATGTTATGATGATGAAAAACTACTCTAGAGAAGAGTAGAACAGAAATGCTTCTATGGA GGAGCAACGTGAAACCAAACATATACCAAGTGTTCCTCTTGCTAGTCTACAGCTCACACTCTTTCTATTTGCAGGGTCTT GACCCAAGAACAACTGCGAGCATGTTTATCAATGCAAGGTGCATTGGTGAGAAGAAGATAAATGAAGAGGACTGTTTCAT CCTCAAGCTTTGTGCGGATCCCTCAACATTGAAAGCAAGGAGTGAAGGCCCAGCAGAGATTATAAGGCATGTCTTGTTTG GGTACTTCAGTCAAAAAACAGGACTTCTTGTTCACTTGGAAGACTCACACTTGACCCGAATTCAGAACAATGGAGGCGAT GCGGTGTATTGGGAGACCACCATAAACTCATTTCTTGATGACTACAGGCCTGTTGAAGGGATCATGATTGCTCACTCAGG TCGATCCGTGGTGACACTGTTCAGGTTTGGGGAAACAGCAATGAGCCACACAAAAACCAGGATGGAAGAAGCATGGACAA TTGAGGAGGTCGCCTTCAATGTCCCTGGCCTTTCTGTGGACTGTTTTATTCCTCCATCTGAGCTAAAGTTTGCTTCCATG AGCGAAGCCTGCGAGCTTCCTCAAGGTCAGAGGGTGAAGACTTCTGTGGTAGCAGGTGCTGCATACCATGCCAAAGTTGC TCAACTACAAAAATCACATGAAAGCAATATAAATAACGTTAACTGGAAGGTTGATGTTTAGCAAAAGAGGAAGTTTCTGG ATTAGCCTAGATGTCTAGTTTTAATACTTTCGTGGACTGCTGACTAATTAAGTGCATGTTTGGTAAATAGGTTCAGTTTC GTGTGTAGCATGCGTATAACAGAAGCAACAGCGTGCAGCTTCTGCCTCGAATACGCGATTATGCCCTACGGAACGCTGAA CCAAACATACACTAATGCAGGTAAATGGTAAGATTGCAGCAGGGTTGTCAAGAGTTTTCTGCTGTAGATCATTGCCTCAT CAAATTTGTAAATAGAAATGATCAGTCATGGATCCAAAAAAGTGAATTTAAATACTCTGGGTTTTGGTGGATGATTATGC TCATCAAGGTTTGATTTTTCCCCTTGTTATCCATAAGGCTCAATTTGGGAATCTGCTGATCGTTTTGTAAGCTATAATTC GTGTAGATTTTTTTTTTCTGTGAAAGCTTTCTGCAATGATGCTTGAAGATCACAGTTACAACCTAGGTTTTATCACTGAA AAGTTTTTGCTATGAGTTTTAAGTCACTAATACTGATCTTGCTTGTGGTACCTGAGGAAATCTCTTCCATCTTTGACAGG AAACTAAATAGGGTTGAAGAACTTTTGAATGTGTTTCATGCTGCGTTTGTTATGAATTGTAAACCATGTACCTAGAGTTA GTGGAAGCTAAGTTATTCCTAGACCTAAGATTCTTATGCTTTTTAAGGACACATATATTGACTATTTCCACAAGCTTGTA ACAATATTTAATTGTAACTAATGTCAGAAGAATTTCAAGATTTCCTGCACTATTCGAACTACTTTTTTTTTGTTAGCAAG AAAAAGCTATTCAATTATGTACTTTGAATGATGATGGCTTTTTCATGCAGTTTGATATCATCATTATCTCTGTCCCCTCA TGCGCTGCTAGCTCCGTCAATTATGCTTGAGATGTTCACATCTGCTTGAGATGTCCACATCTCGGTATAGTTCTTTGCAC TTGGAGATAATATAGTATTTTCTTGTGAAAATATTTTTCTAATATATATATATATTTGGTGAAAATAGAGTTGTTATCTT GCCAAACCTTTTGATCCCCCAATGGACTTTGAAACCCATCGACGCAAATTAGTTTTAC
CDS sequence (LotjaGi5g1v0031900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGAAAGCAAGGGTTCTTCTCGGCGCTCAAGGAGGAGGTGGTTCGCGGTCTCTCGCCGGCGAGGTCACGGGCCAA GAGTCCGGCGAGGAGCGCTTCTCCGATGTCGGGGTTACTCCGGCGACGGAGGAAGCACCACGCTCCGCCTCCGGAGATTT TCGTTACGAGATCGGGGAGTCTCAGGCCGGCGGAGGCGTTGTCGCCGTTGAAGGAGGGTCCCGACGGAACTGACGGCCAG TGCTCCAGCAGAGGGGAAGGACGGTGGGGGCAGTGGATGAAGGGACCACTGGCTAGAGCGCCGTCTGTTTCTTCTTCTTC GTCGTCGTCTTCGGGTTCTTCTTCTGCTGCCGCATGCAAAAAGTCCGATCTGAGATTGTTGCTTGGTGTGTTGGGTGCTC CACTTGCTCCTGTTCATGTCTGCACCACTGACCCTTTTCCTCATCTCAGCATCAAAGACATACCCATTGAAACTTCTTCT GCTCAGTACATACTGCAACAGTACATTGCTGCTTCTGGAGGGCAAAAGCTTCAAAATTCCATCAACAATGCTTATGCCAT GGGGAAGGTGAGGATGATAGCCTCTGAGTTTGAGACTGCGAACAAGGTCACTCGCAACAAGAACTCCTCCAAAGCTGCAG AGTCCGGTGGGTTTGTCCTGTGGCAGATGAACCCAGACATGTGGTATGTGGAGCTTGCTCTTGGTGGCAGCAAGGTTCAT GCGGGTTGCAATGGGGAGCTTGTGTGGAGGCACACGCCATGGCTCGGTGCACATGCAGCAAAAGGGCCAGTGAGGCCTTT GAGACGTGCCCTTCAAGGTCTTGACCCAAGAACAACTGCGAGCATGTTTATCAATGCAAGGTGCATTGGTGAGAAGAAGA TAAATGAAGAGGACTGTTTCATCCTCAAGCTTTGTGCGGATCCCTCAACATTGAAAGCAAGGAGTGAAGGCCCAGCAGAG ATTATAAGGCATGTCTTGTTTGGGTACTTCAGTCAAAAAACAGGACTTCTTGTTCACTTGGAAGACTCACACTTGACCCG AATTCAGAACAATGGAGGCGATGCGGTGTATTGGGAGACCACCATAAACTCATTTCTTGATGACTACAGGCCTGTTGAAG GGATCATGATTGCTCACTCAGGTCGATCCGTGGTGACACTGTTCAGGTTTGGGGAAACAGCAATGAGCCACACAAAAACC AGGATGGAAGAAGCATGGACAATTGAGGAGGTCGCCTTCAATGTCCCTGGCCTTTCTGTGGACTGTTTTATTCCTCCATC TGAGCTAAAGTTTGCTTCCATGAGCGAAGCCTGCGAGCTTCCTCAAGGTCAGAGGGTGAAGACTTCTGTGGTAGCAGGTG CTGCATACCATGCCAAAGTTGCTCAACTACAAAAATCACATGAAAGCAATATAAATAACGTTAACTGGAAGGTTGATGTT TAG
Protein sequence (LotjaGi5g1v0031900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERKQGFFSALKEEVVRGLSPARSRAKSPARSASPMSGLLRRRRKHHAPPPEIFVTRSGSLRPAEALSPLKEGPDGTDGQ CSSRGEGRWGQWMKGPLARAPSVSSSSSSSSGSSSAAACKKSDLRLLLGVLGAPLAPVHVCTTDPFPHLSIKDIPIETSS AQYILQQYIAASGGQKLQNSINNAYAMGKVRMIASEFETANKVTRNKNSSKAAESGGFVLWQMNPDMWYVELALGGSKVH AGCNGELVWRHTPWLGAHAAKGPVRPLRRALQGLDPRTTASMFINARCIGEKKINEEDCFILKLCADPSTLKARSEGPAE IIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDAVYWETTINSFLDDYRPVEGIMIAHSGRSVVTLFRFGETAMSHTKT RMEEAWTIEEVAFNVPGLSVDCFIPPSELKFASMSEACELPQGQRVKTSVVAGAAYHAKVAQLQKSHESNINNVNWKVDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 467 | 467 | 7.8E-258 | – | |
| MobiDBLite | 1 | 92 | 92 | - | – | |
| PANTHER | 1 | 467 | 467 | 7.8E-258 | ||
| Pfam | 185 | 426 | 242 | 1.2E-122 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0031900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…