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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0036800 |
| Transcript ID | LotjaGi5g1v0036800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G10120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74; TrEMBL-Plants: tr|V7CU85|V7CU85_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0036800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6089741..6094716) extracted from Lotus japonicus Gifu genome v1.2.
ATTACAAGGAGTAAAGTACAGAAGAGAAAAGAGATTAGGTTCTTCTGCTTGTGCAATAATTTACCAACAGGAGCAGTTGG CAGTAGTTAGTCTGTCTTTTAAAATGATACATGTCATTTCATAGCTTGGGCAGGTAAGTAAAGAAACACTCTCCCACACT CTCTCTCTTCAATTTGTGTCTTTCTCTTTCTAGCTTTGTAGCTCCTGGTGTTGTCTGTAATCTATAAAAGTTAGATTTTT ATGCTACCTTTGGTGTTTATGCTCACTACCCATTTCATGAAATTTGTTTTTGCTGTCAAATTTATTTACATCTAAGCAGC ATTTGATGCTCTCTGGTGATATTGTCAGAACACACCCCAACTAGAGGAACTGTGTTCAACTTCAACCTAAACCCTGTCCC TTTCAGTTTCCCTCAGTCATTGCAGGATTTGAGTAGAATTAGATGCTTTTGGTCTTTCCTTGTTCTTGGATTCCCATCCT TGAATTTAATAGCAAGAGTTTCAAAACAGCACTTCTTGTCTTGTCTTTTAAATCAAAATCTTAAAAAAGATATATACCAA CTGTTTGTTCTATTGCCTCAAAGAGTTGCAATTGCAAGCAAGGCAATTCATGTAATGGAAGATTTGATGGAATGGAGATT TTAGTTGATGTTGTGTGGAGTTTGGACAAAGGAGAAAAGGGAATCTGCTTTACTTGCAGTTTGATGAGCTGTTAGCTAAT CCCATTGTCCATGTCCTTCACCTTTATGCTCTCACAAGACTGAAAGGTTCACTTTCTTGTCTCAGAGGAAGCATTTTATA TATATTTTTTGAAGCAGTGTAGACTTTGATCCTAAGGTTCTTGAAGGAAGAGGTAATAACCTGGTGTCTGACGAGTAAGA TTATATTCCAATTTACTTTTTCTATGTAAGCTACTACAATGAGGGTTTTCTTTTACTTTAACTTCCTCTCAGTCCTATAA AGCTGCCAAGCCCTTTGTTCCTTGTTTAGTCCTGCAAGATATCTCTCGAACCAGCTTAGTCAAAATTCACTTTCCCTTTA ATCATTTGCAATTGTTTATTTCTCATGTTTCATCATATCTAGATGCAGCACTGGTGTGAATCAGACTGCAGAACTAGGAT TGTGGTCACAGGTTGATATATATAGAGAGAGAGGGTAACTTTCTTGGTTGTGACTGTTTAGTTTAGACTTTAGAGTGTTA GAAACTATTGAATCCAAATGGGGGGTCAAGAAAATGCTATGAGGTTTCAACATGGAAAGGAGAGTATTATGAGTGCAAAT GTTTCAGAAATGGCCATTAGTTCTGTGTCTTTGGCTAAACCTTCAGAGGCAGCTAATCCTTTTCTTGCTTCTCATGCTTG GGATCCCCTTGTTTCATTGAGTCAGGCTCAAACTTTTGGAGGGTCTTCAATGGTTTCTCATGGTGAGTATGCCAATGCAA ATGCTTCTTACCCTCTTGTTATGGAGAATCAGGGAATGGGAAGCACCTCTCACCTTGTTCAATACATGTCTGACTCAAAT CTTAGGGGCATGGTACCCAAGATTCCCTCCTATGGAAGTGGTAGTTTCTCAGAAATGGTTGGCTCCTTTGGCCAACATGG GTCTGGTGATATAACCAACACAGGGTATCCACAACACTATAATGCTGGCATTGAAAGGGTTCCAATTAATTGTGAGCACT CACAGGTTGAGGACTCAACCACTGAAGAGGGAGCCCCAGGATCTGCACCTAGTGGAAATAGAAGAAAGCGTGGGCTTGAT CAAAATTCTACCTTCAATCCAAACAAGGTTTGTACTTTGTTGACTGTAATACATCAATGAATCTCATTTAGGACTTGGAA TGTTAGTTTCATTGTCTTGTTTATGTGGTTTTGTGAGCTAATAATGAATGAAATCCTATATGAACTCCAATTAGAATGCT GAGGGTGATGAACTGAAAGATTCTCCTGGGAAGATCTCTGATGGTTCAAAAGAACATGAAAAGAAACCAAAACTTGAGCG GAATGCTAGTGCAGATTTGAGAGGCAAGCAATCGGTGAAGCAAGCTAAAGACAACTCAGAAAGTGGAGAAGGTTCCAAAG ATAATTTCATTCATGTTAGAGCTCGTAGAGGTCAAGCCACAAACAGTCACAGCCTTGCAGAAAGGGTACCACCACCATCT TTCTAATATGTTTGTTATGAGAAATCCCTTTGTTCTATTGTATACATATAAATGTTTGGAAATCATTTTAGAATTGATTT TACAGCCTAAATCAATTTTAAAGAAGTTGATTCTGAGTGCCAGAATTGATTGTGAGAGAAAATAAGCTGATCCAAACTTA GTCCTAATAGTTGTAAACCTTTTTGCTTGCAGGTAAGAAGAGAAAAGATTAGTGAAAGAATGAGGTTGCTTCAAGAGCTT GTTCCAGGATGCAACAAGGTGATTTGATTGAGAAGATTAGTTAAATGATTTTCCATGTGTGTTGATTTTTCTGCATACTA TGTTCTCTTTGTTTAACTATGACAATAATGATGTCTTTGGTTTTCTATCAGATAACTGGCAAAGCAGTAATGCTGGATGA GATTATAAACTATGTGCAATCACTGCAGCAACAGGTTGAGGTATGAAAGTACTGCAGTGCCATATTTAATGTATCAATTT AATATTCAAACTTGATCTGTTTTGTACTGTGCACATGCTTCCCTCCCGGGGAAAAAACTTAAAAAAATGCATAATAATAT AATGGAATTGATTATTTAACTGAATAGTAAATGTTAAGAGATATATTATAAGTCAATCACACAATTCCATAGAGTCAATT CCATCATTATGGTTCTGGGAGTATTCATCTAATTAAGGTTTATTTTGCAGTTTTTGTCCATGAAACTTGCTACTGTGAAC CCAGAGATGAATTTTGATTTAGAGCGGATCCTATCTAAAGATGTAAGTGAAAGTCTTATAGCATGTTTGAATCAGCTTAT TTTTTCTCATAATCAATTCTGACAGTTAGAAGCTACTAACAGAAGCTTCTCCTCAGAATTGATTTTAACTTTAGAATCAA TTGTACAAAAAATTCCAATCCTGCTATCAGTGTGTTTCGTGTAGAATCAATTTATTCTCCTATTCTTTGAGAGAAATAGA TTTCCATTAGAAGTGCTTGTTACCATTGTTAACGGAAATCCAAACATAGGACATGGATGTGAGTACACAAAATTATTATG ACTTCATTTCCCTTTTGTTTAGATTCTCCAATCTCGCATAGGACATGGAATTGGTGGTTATGGTGCTGCTGGTGGTATCA GCTCCTCTCACCCATTCCCGAATACAAGTTTCCAGGGAAATCTAGCTGGCATGCCTGGTTCATCAACACAATACCCTCCT TTGCCACAGGTAAAAAAAGGGTAAAATTTCTTTTGATACAGTACTCTTTGTAAAATTTCTGCTGATATATATCCCTTTGC AGAATGTTTTGGACCATGAGTTCCAAAGCTTCTATGGAATGGGATATGATTCCAATACAGTACTTGACAATTCGGGACCT AATGGTAATAGACATTATCTTTTTAATTTTGATTATTTGTATAATCAATAGTGTGTGCTTTATTCTAATTTGTTGTCATG TTAAACAGGGCGGTTGAAAACAGAGTTATAGTATCTACAATATATAGCCTTGTTTCTACAACAAAGACTTCAGAATTTTC CTGTTGACCGCACAATTTAACTGAAGTTGAAGAAAGGAAAATAAAGGTTTTAGTTGTATAGGAAGGATCTTTCTTAATAC CTAACTCTTGGCTCTTCGATTTTTTAGCAGAAGATGACTTCGTTAGATTTATCATTGGAAAAATTACACATGTTATGTAA ATGTGTGTAAAATCTAGATCATTAAGAACATCCTGCGGTGGTGGTCTTAATATAGTGACATGGAGGAGCAGTATTTGAGG AGCATGCAAGGGTATGCAACCATAATTACTTTTTGTGAAATTATTATGTATAGAGTTGCTGGGCTTGGAATCTTGAAGCT CATTGCTTTCAACATTGTTGCAGATAAGATCATGTGTGCACTTTTGTAAGGATCTCTGGTTGTTTTTATATTGTTCTTTT GAAAAGAAAATTTACTGAGTGAAGAGCTTCTTAGTGCATGAAGGGGTGAAAATGCTGCCACTTGTATGAGTGTGTGCTAG AGATGGTTACCAATGCTTCAAAGAATGTCCTCATCTTTTCTGAGTGTTGCTTTTATAACTCTTTAACATGGGAATTACAA GAATTTAAATTGGAACCTGATACTTCCACAATTACCGTTCTCTCATATATCATATAACCCATTTTATTGAATTATGGTTG AATTATTTTAGATCAACCTAAAGTGACCAAAATCAATTAGAACCTAGTTTGTTGTGTTTAAAAAGACACGGTTCCTTACC TGCACCAGTTGAGAAAGTGTATAAGTGTTTATTTCATATATGCATGTAGTCCTCTATTCCTATGTCAGAAATGTTTTTTT TGGTCATTAGGGGAAGTTTGTTGATTAATGACTACGTGCATGTTTGGATACATGGTGAAATATTACAGTGAGCTAAAACT ATGGTAAACAAACAAGTTTCCTTAGCTTTTTTAGCTATTCGCTGTGATTTTGGCTTCACTGTAGTTTTTCTATGTATACT CAAACATTGCACTATGAAAAAGAAAGGTAAGTGTGAAAATATCTAAATCGGTATGAATATAGGGTTTTGGACTTTTGGTT GACAAATGATAGTGTATATTGTGCATATTTGCATAGCAATTGCTTTTTGTTCACTGTCAATGACCATATTTTTCCCCTTT CATGTTTTATTTTATTTTATGTAAATGACAAATTACAAGGACTTTCGGATGTATTTCAAACACATTCAATAGATTGGATC CATGTTTTTATAAAAATTACTCCCTCCGTTCCTATATATAAGTCACAAATAACTAAATCTCTTAGATTAAGAAAAGTAGT TACTAGTAATAAATTT
CDS sequence (LotjaGi5g1v0036800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGGTCAAGAAAATGCTATGAGGTTTCAACATGGAAAGGAGAGTATTATGAGTGCAAATGTTTCAGAAATGGCCAT TAGTTCTGTGTCTTTGGCTAAACCTTCAGAGGCAGCTAATCCTTTTCTTGCTTCTCATGCTTGGGATCCCCTTGTTTCAT TGAGTCAGGCTCAAACTTTTGGAGGGTCTTCAATGGTTTCTCATGGTGAGTATGCCAATGCAAATGCTTCTTACCCTCTT GTTATGGAGAATCAGGGAATGGGAAGCACCTCTCACCTTGTTCAATACATGTCTGACTCAAATCTTAGGGGCATGGTACC CAAGATTCCCTCCTATGGAAGTGGTAGTTTCTCAGAAATGGTTGGCTCCTTTGGCCAACATGGGTCTGGTGATATAACCA ACACAGGGTATCCACAACACTATAATGCTGGCATTGAAAGGGTTCCAATTAATTGTGAGCACTCACAGGTTGAGGACTCA ACCACTGAAGAGGGAGCCCCAGGATCTGCACCTAGTGGAAATAGAAGAAAGCGTGGGCTTGATCAAAATTCTACCTTCAA TCCAAACAAGAATGCTGAGGGTGATGAACTGAAAGATTCTCCTGGGAAGATCTCTGATGGTTCAAAAGAACATGAAAAGA AACCAAAACTTGAGCGGAATGCTAGTGCAGATTTGAGAGGCAAGCAATCGGTGAAGCAAGCTAAAGACAACTCAGAAAGT GGAGAAGGTTCCAAAGATAATTTCATTCATGTTAGAGCTCGTAGAGGTCAAGCCACAAACAGTCACAGCCTTGCAGAAAG GGTAAGAAGAGAAAAGATTAGTGAAAGAATGAGGTTGCTTCAAGAGCTTGTTCCAGGATGCAACAAGATAACTGGCAAAG CAGTAATGCTGGATGAGATTATAAACTATGTGCAATCACTGCAGCAACAGGTTGAGTTTTTGTCCATGAAACTTGCTACT GTGAACCCAGAGATGAATTTTGATTTAGAGCGGATCCTATCTAAAGATATTCTCCAATCTCGCATAGGACATGGAATTGG TGGTTATGGTGCTGCTGGTGGTATCAGCTCCTCTCACCCATTCCCGAATACAAGTTTCCAGGGAAATCTAGCTGGCATGC CTGGTTCATCAACACAATACCCTCCTTTGCCACAGAATGTTTTGGACCATGAGTTCCAAAGCTTCTATGGAATGGGATAT GATTCCAATACAGTACTTGACAATTCGGGACCTAATGGGCGGTTGAAAACAGAGTTATAG
Protein sequence (LotjaGi5g1v0036800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGQENAMRFQHGKESIMSANVSEMAISSVSLAKPSEAANPFLASHAWDPLVSLSQAQTFGGSSMVSHGEYANANASYPL VMENQGMGSTSHLVQYMSDSNLRGMVPKIPSYGSGSFSEMVGSFGQHGSGDITNTGYPQHYNAGIERVPINCEHSQVEDS TTEEGAPGSAPSGNRRKRGLDQNSTFNPNKNAEGDELKDSPGKISDGSKEHEKKPKLERNASADLRGKQSVKQAKDNSES GEGSKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT VNPEMNFDLERILSKDILQSRIGHGIGGYGAAGGISSSHPFPNTSFQGNLAGMPGSSTQYPPLPQNVLDHEFQSFYGMGY DSNTVLDNSGPNGRLKTEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 409 | 406 | 2.3E-179 | – | |
| PANTHER | 4 | 409 | 406 | 2.3E-179 | ||
| MobiDBLite | 155 | 267 | 113 | - | – | |
| MobiDBLite | 176 | 191 | 16 | - | – | |
| MobiDBLite | 192 | 252 | 61 | - | – | |
| Gene3D | 254 | 327 | 74 | 1.1E-13 | ||
| CDD | 255 | 312 | 58 | 1.13024E-11 | ||
| SUPERFAMILY | 255 | 326 | 72 | 4.32E-17 | ||
| ProSiteProfiles | 257 | 307 | 51 | 15.485 | ||
| Pfam | 260 | 308 | 49 | 3.0E-6 | ||
| SMART | 263 | 313 | 51 | 4.6E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi5g1v0036800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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