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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0040100 |
| Transcript ID | LotjaGi5g1v0040100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|O24325|VPE1_PHAVU Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A0B2RVB7|A0A0B2RVB7_GLYSO Vacuolar-processing enzyme; Found in the gene: LotjaGi5g1v0040100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6781988..6789199) extracted from Lotus japonicus Gifu genome v1.2.
GTGATCATACTCAATTTTTCGAATTCATCACTCGTTAGGCCAGTAGCACCTCATTCAGTTATTTATAAAACCTGCTCTAC CTTAAATTCTCTTCAAAGAGCCTCGTGGGCCCCATAACCCCCATTCCTCATCCCCTCTCAAACATCTCTTCATTGGAATC TTTGATTCTCTTCTCCAGCCAACTCAAGGGTCACATTCCCTTTGGGTTAGGCTCATTGTTGAGTCTCTGAGTTTTTCTAA TCGATGACAATGACCTCATCGGTGTAATTTATGTGTCACTTGAGAATATAGTTAACCTCACATGCCTTGGTTTAGCTTCA TCCAGACTCACCGGTTCGATTCTTCCCCAACTTTGGCAATTCATTGAGTCAGTACAAGTTGGTAAGTCTGCTTCGGTATG AGATGGGGAGCTGCTCAAGCATGGTCACCTTCATTGTTGCAAACAACAAATTCAATGACTCAATCCATAGTGAATTGGGT CAGCTCAAGGAACTCCAAACTCTCAACCTTTCCAACAACAACCTAGAAGGGGAAATTCCAAGTCAACTCAATCAAATGAG TGAACTTATGAATTTATAGGGAACCAACTTGAGGGTCGGGTTCCATCATCACTAGCTCACATGGGTAAGCTTCAAACTCT TGACTTGTTTCTAAACGCGCTCAATGGAAGAATTACATAGGATTGAGCAACATGTTATTTGGGGAGATACCTTTAGAGGT TGATAATTGTTTAAGTTTGCAAGCGATTGATTTTTGTCGGAAATATTTCATTGGGGAGATTCCCATCACTATTGGGACAC TGAAAGAGTTGAATTTCCGTCAAATTAGGCAGAATGACCTCGTAGATGAGATTTCATCCTCCCTTGGCAACTGTCATATT GTTAAAGACGTTTTAAAAAAAACTGAATATCAGATACCCAATTGAATTGAAGGGGGTCGTTAGCATAGAGGAAAATTATG CAGGGGTTGAATCATTATTGGAAATTGACTCAACAGAAGTTGTTCGAGTGATTGGAATATGGAGCATGGGTGGCATAGGG AAGACCACCCTGGCGTGTGCTTTGTATGCCAAGTTTTTTTTATCAATTTGGAGGTCATTGATTACATCCTCCCTTGGCAA CTGTCATAAACTGACTATAGTGGACTTGACAAACAATTATCTCTTAGGGGAATTCCTTCAACATTTGAATCCTTCGAGTC TTGTTGTTCATTTGTGCTCTTTATTTGTAATTTTGTATCCTATCTATGTTTATGATATCACATTAAAAGTTGGGTAAAAT GTCTTTCAACACAAACGAAAAGCATATATCCCTCCTTCTATTATCTATTTAATCAAATAAATGATAAAGAACTCACAAAA TTCTTTTTCATACCAAATAATTTATAAATTATACTTTTTTCCTATCTTCTTTCACTGTTATCATCTTCTTTTTACCAACT TCTCTCTTTTAATTTTCTCTAATTAACTAAACAAAGTCTAAATCACCACCACCACACCTCACACACCCCTCGTTGAATTT CAATTGCTTCAAAAATTAACCAAGTTTCTTCAAATGACAAATATACTTGTTTTTAAGCATAAAAACCAAAAAATAAATGC TTACAATTTTGTTGCAACTAACTTAAATAAAATAAGATAGGAAACCAACAAAACTTAAATAGGATTCAAATATCTCCGGG AGAGCGTGAATTAAAAAAGGACTCACTATCAGTTTACATCAGAAGGAGGGACCCATGGAGAAATTTCGCCCAATGTATGT AACCCAAATAACAAGATATATTATCAATTATTCAATTTCCAACTCCATACGCCATCTATATACCACTCATACCATTATTT TTTTATTTTAAGATATTCTCATTACGATAACCATAAGACTAATCATTCGAGACTCTAATTTTAAAAAAAAGAAAAAATTC TCCGAGACTTTGTACGTCTATTAACAAATGTTTCACCATATGCACCGCCTATAAATTGCACCGTGAACTAGATATGTAAG AAGCTCAACTATCTATGAATTGTGGTGGGAGCTCACCTTCATTATTGATTGAGTGAGTCACTCACTATATCCATCTATTT AATCCTCTCCAACTTCCCTTCACCTGATTCACAGAATCACAATGGAATCTTCTCAATTTCCCTCCCTTCTCTTTTTCCTC CTCACCGCAGCCTTCCTCGCCGTCGCCGCCGCTGGCCGTGACCTCACCGGCGATCATCTCCGCCTTCCCTCCCAAGCAGA AAGATTCTTCCGTGAACCCGAGAACGATGACAACGTTCAAGGGACTAGGTGGGCCATCTTACTTGCCGGTTCCAGTGGCT ACTGGAACTACAGGCATCAGGTACGTGTAATCTTTCATGGTTTCAAACTAGATTCTTACATGGAATTGAAAACATGCGTA TGTTGCTGTTTGAGTGATTAAGCTTAATTGAATGAAAACTTTATTATTTGGTCATGTTAATAATAAAACTAACAAGTGTT TTTGTATAATAATTGTAACATGCTGTTTATTTAGTTACAAATTGTAACTAAATAAATGACATGTTTGAATCAACTCTGTT TTATCAGAATTAATTGCCACACTCCCCGTAGGATAACTCAAGTGGTAGGAGCTAGGGACATATGAGTTGGACAGGTACAA TTTATTTTTCCGATGTACAAAAAAAAAAGAGAATTAATTGCCACACTCAAAAGCTATTCACATAAACTTCTCTAGAGAAT TGAAGTATCACTATTCTATTCTATGCAATCTTAACATCCCTCACCCTAAATAAATCATATTTTGATCAGCACAGAAAAAA AATAATTCAATTTTAGTTTCTGTTGGTAAAACCATTTTCAGTGTCATCCTTGCCTAACATGGTTGTTAATTTTTATGATA CTGAAATTTCCATGGAGTTACTGTAAAGTATAGAGACTAAATTGAAAACAATTGTCAATTATTGGAACCCAAAAGTTCAA GCAAGTCTGGTACCTAGCTTCCTATACATGAAAGAAACTCATGTTTAATATGGTCTGTCTATATACGCTGTACTTGTTTT CAATTTGGTTCCTACACCTCACATGCTACAGCTCTAACAGACATAACTAAATAACTTCAACCTGAGAGTACTATAACTGT CATAGACTGCAAGGACCAAACTGAAAAGAGTTGAATGTTTAGGGACGATTTTTTTGTTTAATGTATATATAGGAATGAAT CGATGTTTATGTTATAGGGTGTCATTGATTGGGATCAATAACATATTTTAACCTTAATTTATTTACAATTTTCTATATGT ATTTAGTTGTTTAGTTTTAATATGTTGTTTCCTCAGGCTGATGTTTGCCATGCCTATCAAATCCTGAGGCAAGGTGGCCT GAAAGAAGAAAATATTATTGTTTTCATGTATGATGACATTGCTTACAATGAAGAGAACCCTAGGCAGGGAGTCATCATTA ACAAACCAGATGGGGGTGATGTTTATGAAGGAGTTCCAAAGGCAAGTTGTGTTAGTTTTCCGGCATCCCATATCCTATTG CTATTTCAAGTTTGATCGTCTCCTAATTATGAACTTTTTATTTTTTTATGGCAGGATTACACTGGAGCAGATGTTACTGC TAGCAACTTTTATGCTGCTTTACTTGGAAATAAGTCCGCTCTTACTGGCGGCAGTGGGAAGGTTGTGGATAGTGGCCCCA ATGATCATATATTTGTATACTATACTGACCATGGAGGTCCAGGGGTGCTTGGTGAGTAGCCCTGAATTCTTCCAAAGAAA CTTTATAATGAAAGACATGGACTGTGTAGGTTGTTTATGTGTTTCAGTTATGGTATAGACCTTGTTTGAGGTTACTACTG ACAAATAAGCGTGTTTATTTTTGTTGTTTGGTTGATTGTGAGTTTATTTGGTAGATCATGTCTTAGAAGAATGAAACCTC TAAATATTTTAGCATTGCCTATGATCTCCTCAAAATGTAAACTGGGTTCTGCGGTGCTTGGTACTTTCAAGTTTCAACAC AATAAACTGAAAATTTTGAACAGATAAACGATGTGTCTGAATGGAATGAAATATTTCAAAATTATTATTCGCTTGTTGGA ACTTGGAGCACAGGAGTGGGTTCAAGAGAGTCCTGTTGGTCCTTTCTGTTTCTTATTTAGTCTTTTTGTAACACTAATAT CTGCTCCTTTCTATTTCTTTTCTGGTCTTTTTTTGGGACTTGGGAGTGGATTTCAGGGATGCCTGCTGGTCCTTACTTAT ATGCAGAGGATCTGATTGAAGTCTTGAAGAAAAAGCATGCTTCCGGAACATATAAAAGCCTAGTAAGTTACTAGTTATTA TGATTTTCTTGTTTATATGTTTCAATCCTTGTTTGGGATGTTTAACATGTTTGGATTTCATCATTTCTGGGCAAATAATT TTTTTTTTATAATTTTTTCAAATGCTCTCTCAACTTTTAGCTGTAAGTTGTTTTGAAAACAAGATAAGCTTATCCAAACA AACACTAAATCTTTGGGTGTATGTAACGGCGGTGCAGGTATTTTATCTGGAGGCATGTGAATCTGGGAGTATCTTTGAAG GTCTTCTTCCTGAAGATATCAATATCTATGCAACAACAGCTTCAAACGCAGAAGAAAGCAGTTGGGGAACCTATTGCCCT GGCGAGTACCCTAGTCCTCCCCCAGAATATACAACCTGCTTGGGTGATCTGTACAGTGTTGCTTGGATGGAAGATAGGTA TGTGCATAATAAAGGAACATAATTATATCATAAATGAGTTTATTTAACGTGATGAAATACTTCTTATACCCATGCAATTA CCATGAAGTAGTTAGTTCAATGCCTGTTTCTACTGCGTCTTGTGTGTATCTTCATGAGAGTTTTATATGCCTGTCTTTGT ACTCTGAAACAATTTCTTATAATAAATTATTCTCAATTATTTTAATTTCCACTTGCAGCTTTTCTTAATTAGACCTGAAG GTTTTTTGAATAATTAGTTTTGTAAGATTTGTTTGTACTAATTTAAATCTTTCTTTACTTGTGAGCAGTGATATACACAA CCTGCGAACAGAATCCTTGCACCAACAATATAAATTGGTAATAACTTGTTGCTAACTTGATTTTCTCTAAATCCACTGAG ATTTTTTAGTCTGCTTTTGTTGAATTCTTGGTCTAACACCACGGGTAGAAAATGTGGTAAGAATTATGTGATTGATGCCT TCTTTACTCCTGTGCTTATAGGTTAAAGACAGGACTATCAGTGGAAGTGAATACTATGGCTCTCACGTGATGCAGTATGG TGATATAGGTCTTAGCAGCAATCATCTCTTCCTATATTTGGGAACAAATCCTTCTAATGATAATATTACTTTTGTCGACG AAAACTCCTTGAGGACACCTTCAAAAGCAGTCAACCAACGGGATGCTGATCTTGTCCATTTCTGGGATAAGGTATCCTAT ATGTGCGCAGTATTTTTCCTCTTAACTTATGAATTAGTTGCTTAATCATTTTTTCATCAATGATTTGACTTTCAAATTTT ATACTTCTGGTATATACATTATTGGGATATATTTGTCATTGAGAGGCAAAATCTCATGACTGGATAGAAATTCAGTGGCA ACCAGTGTGGATATGTTTAATGAGTATTTCTCTGCGGTAGGACTTTCACGCTGTTGTCGCTATCCTTGTTTTCTTCCCTT GAATTTTGGTGCTTAATGCTAAAACAACAAGAGAATAAGGGTGTTCTTATCGGATTACTTGTACTTCATGCTGTAGCTCT TCAAAATTTTCCTATATGTTTCATCTCTTGACTTCGTTGTCACTATTTATGCCAGTTCCGCAAATCTCCTGAGGGTTCTC GAAGGAAAAATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATGTAGACAACAGTGTGGAGCTTATT GGAAAGCTCTTGTTTGGCATTGAAAAGGGTCCAGAAGTGTTCAAATCTGTTAGACCTGCAGGATTGCCACTTGTTGATGA CTGGGTCTGCCTGAAAAACATGGTACCGTTTCCCCTGTTTCAACTTCATCTCTTCTAATGCTGATATAGTGATTTTTCTT TTTTGATCATAATGTAGAATTTGATTCATTGTTTTTCTGCTTGAGCCTAGGGGCAACGATAGAGTTGTGCCTTTTGATTG CGTAAATATTCACAGTATGAGACAATAACAACGGAATTGGCATTTTCTTTTCTTATTACTGTAAAGCATTTTGCTTTTCA CTTTGGTTCATGAGAAAATTTAGCACCTTGATCTATTTTGAATGCAGGTAAGGACTTTTGAGACACATTGTGGATCGCTG TCTCAATATGGGATGAAACACATGCGGTCTTTTGCGAACATCTGCAATGCAGGAATACAGAATGAGCAAATGACTGAGGC CTCCTCACAAGCTTGTGTCAGTGTTCCTGCTAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAGTTCCTAAAAT GCACACTTGTAAAGACCAAAGCACAATGCTGCTACATTATGTTTCATGGCTGTATATACATGTTTATCCTGTTCATCATT TCTCGTCCTGCCTCTGTAAATACAAATAGGACGCGCTGCATCTACGTTTGTGATCCAGTTATTTGGTTGTATCATAGCAA GAAAAGCAATTTCAAGGCATGGTGGCTTTGGCATACAGAAGGATAAAGGACCAATAGCTTTGGAATCTCCTGTGATTTTA TTGAGGAGGCAATTGGCAGATATGGTCTTTACCTTGGCGCTTTGCAGCAGAATTGACAACCCTTTGTATAATTAATTTAG AAGAATTGTAATATGTGGTAGACTTATTGTTTAATATTTTAATATTGATGTTGAACTAGAACATCGTATTTGTTGCTGTA TAATATTGGAACTGCATTACACTTTGGTGCATTTGCAACCGAATGATTATGATGGAGTATATCTATTTTATTTTATTACA AGTTGTGATTGAGGTCAAGATAAATTAAGATCAAGATTGCAGTTCAAGAAAGATGAATTTGTACAGAAAGCACCAATCTC CTCTGGTTTATGGCTCTAAATTTTTTATTTTTTTTTAAAGTGAACTCAGGATTACCAATCACAACGGAAGAAAATCAAAA CTGAGGGTAAACTAAGGCTATTTACCTTGTACATCACTGGTAAGTGGCCTTGCAGATAATCAAAACTGAGATTTGTTGGA TTGAAAAAAAAG
CDS sequence (LotjaGi5g1v0040100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGCTGGTCCTTACTTATATGCAGAGGATCTGATTGAAGTCTTGAAGAAAAAGCATGCTTCCGGAACATATAAAAG CCTAGTATTTTATCTGGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGATATCAATATCTATGCAA CAACAGCTTCAAACGCAGAAGAAAGCAGTTGGGGAACCTATTGCCCTGGCGAGTACCCTAGTCCTCCCCCAGAATATACA ACCTGCTTGGGTGATCTGTACAGTGTTGCTTGGATGGAAGATAGTGATATACACAACCTGCGAACAGAATCCTTGCACCA ACAATATAAATTGGTTAAAGACAGGACTATCAGTGGAAGTGAATACTATGGCTCTCACGTGATGCAGTATGGTGATATAG GTCTTAGCAGCAATCATCTCTTCCTATATTTGGGAACAAATCCTTCTAATGATAATATTACTTTTGTCGACGAAAACTCC TTGAGGACACCTTCAAAAGCAGTCAACCAACGGGATGCTGATCTTGTCCATTTCTGGGATAAGTTCCGCAAATCTCCTGA GGGTTCTCGAAGGAAAAATGCAGCTCAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATGTAGACAACAGTGTGG AGCTTATTGGAAAGCTCTTGTTTGGCATTGAAAAGGGTCCAGAAGTGTTCAAATCTGTTAGACCTGCAGGATTGCCACTT GTTGATGACTGGGTCTGCCTGAAAAACATGGTAAGGACTTTTGAGACACATTGTGGATCGCTGTCTCAATATGGGATGAA ACACATGCGGTCTTTTGCGAACATCTGCAATGCAGGAATACAGAATGAGCAAATGACTGAGGCCTCCTCACAAGCTTGTG TCAGTGTTCCTGCTAATCCCTGGAGTTCTCTGCAAAGGGGTTTCAGTGCATAG
Protein sequence (LotjaGi5g1v0040100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAGPYLYAEDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYT TCLGDLYSVAWMEDSDIHNLRTESLHQQYKLVKDRTISGSEYYGSHVMQYGDIGLSSNHLFLYLGTNPSNDNITFVDENS LRTPSKAVNQRDADLVHFWDKFRKSPEGSRRKNAAQKQVLEAMSHRMHVDNSVELIGKLLFGIEKGPEVFKSVRPAGLPL VDDWVCLKNMVRTFETHCGSLSQYGMKHMRSFANICNAGIQNEQMTEASSQACVSVPANPWSSLQRGFSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 169 | 169 | 5.2E-60 | – | |
| PANTHER | 1 | 310 | 310 | 1.2E-196 | – | |
| PANTHER | 1 | 310 | 310 | 1.2E-196 | ||
| Pfam | 1 | 145 | 145 | 2.5E-47 | ||
| PIRSF | 1 | 310 | 310 | 9.2E-149 | ||
| Gene3D | 171 | 296 | 126 | 1.6E-15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
Expression pattern of LotjaGi5g1v0040100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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