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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001096
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.436s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0195629.1
n.a. Vacuolar processing enzyme-1b [Medicago truncatula] gi|357503953|ref|XP_003622265.1| chr0 95464339 95467673 +
3 domain predictions
2 GO terms
Lj0g3v0195639.1
n.a. Vacuolar processing enzyme-1b [Medicago truncatula] gi|357503953|ref|XP_003622265.1| chr0 95465120 95467673 +
2 domain predictions
2 GO terms
Lj0g3v0200719.1
n.a. PREDICTED: vacuolar-processing enzyme gamma-isozyme-like [Cicer arietinum] gi|502126967|ref|XP_004499511.1| chr0 99024325 99025041 +
2 domain predictions
2 GO terms
Lj0g3v0215689.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Glycine max] gi|356560547|ref|XP_003548552.1| chr0 109339187 109339489 -
2 domain predictions
2 GO terms
Lj0g3v0258929.1
n.a. PREDICTED: GPI-anchor transamidase-like [Glycine max] gi|356516961|ref|XP_003527159.1| chr0 134449921 134456009 -
4 domain predictions
2 GO terms
Lj0g3v0258929.2
n.a. PREDICTED: GPI-anchor transamidase-like [Glycine max] gi|356516961|ref|XP_003527159.1| chr0 134452734 134456009 -
4 domain predictions
2 GO terms
Lj0g3v0270939.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Cicer arietinum] gi|502175795|ref|XP_004515742.1| chr0 140320914 140325920 +
5 domain predictions
2 GO terms
Lj0g3v0270939.2
n.a. RecName: Full=Legumain; AltName: Full=Asparaginyl endopeptidase; Flags: Precursorgi|499294|dbj|BAA06596.1| asparaginyl endopeptidase [Canavalia ensiformis] gi|1346432|sp|P49046.1|LEGU_CANEN chr0 140321389 140325920 +
5 domain predictions
2 GO terms
Lj0g3v0349089.1
n.a. peptidase C14 [Fibrisoma limi] gi|496582894|ref|WP_009282733.1| chr0 183281542 183282501 -
2 domain predictions
2 GO terms
Lj1g3v1785750.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Glycine max] gi|356514571|ref|XP_003525979.1| chr1 20825153 20838882 -
5 domain predictions
2 GO terms
Lj1g3v3740420.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Glycine max] gi|356560547|ref|XP_003548552.1| chr1 42964947 42965153 -
2 domain predictions
2 GO terms
Lj1g3v3740430.1
n.a. PREDICTED: vacuolar-processing enzyme [Vitis vinifera] gi|225429442|ref|XP_002276759.1| chr1 42966395 42966911 -
4 domain predictions
2 GO terms
Lj2g3v1877640.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Glycine max] gi|356514571|ref|XP_003525979.1| chr2 27961326 27964114 +
4 domain predictions
2 GO terms
Lj5g3v0369970.1
n.a. PREDICTED: vacuolar-processing enzyme-like [Cicer arietinum] gi|502125429|ref|XP_004498922.1| chr5 3469320 3474272 -
5 domain predictions
2 GO terms
LotjaGi1g1v0365800.1
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49043|VPE_CITSI Vacuolar-processing enzyme; TrEMBL-Plants: tr|I1K8B5|I1K8B5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0365800 LjG1.1_chr1 84368187 84379753 -
5 domain predictions
2 GO terms
LotjaGi1g1v0365800.2
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|O24325|VPE1_PHAVU Vacuolar-processing enzyme; TrEMBL-Plants: tr|I1K8B5|I1K8B5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0365800 LjG1.1_chr1 84368812 84379359 -
5 domain predictions
2 GO terms
LotjaGi1g1v0365800.3
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|O24325|VPE1_PHAVU Vacuolar-processing enzyme; TrEMBL-Plants: tr|I1K8B5|I1K8B5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0365800 LjG1.1_chr1 84368812 84379622 -
5 domain predictions
2 GO terms
LotjaGi1g1v0616200.1
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49044|VPE_VICSA Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A151S655|A0A151S655_CAJCA Vacuolar-processing enzyme; Found in the gene: LotjaGi1g1v0616200 LjG1.1_chr1 116293195 116297343 -
5 domain predictions
2 GO terms
LotjaGi1g1v0616500.1
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49043|VPE_CITSI Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A151S655|A0A151S655_CAJCA Vacuolar-processing enzyme; Found in the gene: LotjaGi1g1v0616500 LjG1.1_chr1 116313994 116318670 -
2 domain predictions
2 GO terms
LotjaGi1g1v0616600.1
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49044|VPE_VICSA Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A151R8G0|A0A151R8G0_CAJCA Vacuolar-processing enzyme; Found in the gene: LotjaGi1g1v0616600 LjG1.1_chr1 116325013 116328233 -
5 domain predictions
2 GO terms
LotjaGi4g1v0209700.1
n.a. Vacuolar-processing enzyme; TAIR: AT1G62710.1 beta vacuolar processing enzyme; Swiss-Prot: sp|P49046|LEGU_CANEN Legumain; TrEMBL-Plants: tr|I1K0K8|I1K0K8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0209700 LjG1.1_chr4 48718617 48724466 -
5 domain predictions
2 GO terms
LotjaGi5g1v0040100.1
n.a. Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|O24325|VPE1_PHAVU Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A0B2RVB7|A0A0B2RVB7_GLYSO Vacuolar-processing enzyme; Found in the gene: LotjaGi5g1v0040100 LjG1.1_chr5 6781988 6789199 -
4 domain predictions
2 GO terms
LotjaGi5g1v0040100.2
n.a. Vacuolar processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49044|VPE_VICSA Vacuolar-processing enzyme; TrEMBL-Plants: tr|Q5QL07|Q5QL07_SOYBN Vacuolar processing enzyme 2; Found in the gene: LotjaGi5g1v0040100 LjG1.1_chr5 6782183 6787307 -
5 domain predictions
2 GO terms
LotjaGi6g1v0011700_LC.1
n.a. Metacaspase; TAIR: AT1G79310.1 metacaspase 7; Swiss-Prot: sp|Q6XPT5|MCA7_ARATH Metacaspase-7; TrEMBL-Plants: tr|A0A072TET9|A0A072TET9_MEDTR ICE-like protease (Caspase) p20 domain protein; Found in the gene: LotjaGi6g1v0011700_LC LjG1.1_chr6 2259073 2259483 -
2 domain predictions
2 GO terms
LotjaGi6g1v0200400.1
n.a. Vacuolar processing enzyme; TAIR: AT1G08750.1 Peptidase C13 family; Swiss-Prot: sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase; TrEMBL-Plants: tr|V7AF99|V7AF99_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0200400 LjG1.1_chr6 49708990 49715630 +
5 domain predictions
2 GO terms
LotjaGi6g1v0200400.2
n.a. Vacuolar processing enzyme; TAIR: AT1G08750.1 Peptidase C13 family; Swiss-Prot: sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase; TrEMBL-Plants: tr|A0A0S3SCH0|A0A0S3SCH0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0200400 LjG1.1_chr6 49710516 49712758 +
4 domain predictions
2 GO terms