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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0040200 |
| Transcript ID | LotjaGi5g1v0040200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like protein; TAIR: AT5G26010.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9XGZ9|P2C72_ARATH Probable protein phosphatase 2C 72; TrEMBL-Plants: tr|I3SRC7|I3SRC7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0040200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6804935..6812306) extracted from Lotus japonicus Gifu genome v1.2.
GTTCAACTAAGCTTTCAGGTACCGCCCACTTGTAATCACATCTGGACCTTATATATATATCATTAAATATTATGCATGAC TTGCTATATATTTAGGTCCTCAAATTCTTAAGGAATAGACTCACTAAACTGTATTAAATTAATTACAGAACAACTAGAAT GGGTATCTGCATATCCCTTGCATCTTCAGAGATTCATGGGGTCCCTGAAGAAGTTCATGATGAGAATGTGACAATATTTG AATCAAACAAGGTCCTAAATGGGAATAAGAGACTTTGCTCTGTTTATTCTAAACAGGGAACAAAAGGACTAAACCAAGAT GCTGCCTCACTTTACCAGGTTTGTTTGTTTATACCATGTTTTGAAATTCTTATACAATTGATTCTAAAGTCAGAATCAGT TTTAGCAATAAGTTTCTGTGGGTAGCTTCTGGGTTCCATAAATTGATTCTGATAAAAAGTTGATCCAAATATATTATAAA TTGGAGTCTTTCTTCTGTGCCTAAGATTAATAAAGCATATAAAATTACGGAGTACATATTCAGATATACAGTAGAAAATC ACGGTGCAGACAAAATCATGATGGGCAAAAATAACTTTTCTTACCTTTTGTTATTGTCCACCATGATTTTCATCCGGGTA TCCAAACATGCAGTGAAACTCCCTCCCCTAACTTTTTTTTCTTTTCTCCTTGCTGTTCCTCAAAAGGGTTACGGGATGGA AGATGGAGCATTTTGTGGCGTTTATGATGGACATGGAAGATATGGACACATAGTGAGCAAAATGGTAAACAGTCATTTGC CTTCACTCATTCTGAGCCAAGGGAATGCTCCTGTAGAGATTAATAAAATAGAAAATGGTGATGACAACACCCCAAGCAAT TTTAACACAGTGGAAGATGACTTGGCTCCAAAGAACTTTCAGAAGTGGAAGAGAGCCATTGTTAGTGCTTTCATGGTGAT GGACAAGCAGGTTAAGCTACAAGAGAATCTAGACTGCTCTTGCAGTGGAACTACTGCAGTAGTTGTCATTAGACAGGTAA ATAAAATAAACACTCAGATTTCATTATTCATTTTCATCTTTGTTATGAGAACATCTATAACAAAAACAATATACAGGGTG AAGGTCTTATCATAGCTAATTTGGGTGACTCAAGAGCTGTCTTGGGAACAATCCATGATGAGAAACTCACAGCCATTCAA TTGACCACTGATTTGAAACCTGGATTACCTAGTAAGTCTCTTCTTATAAACTAGTATGCAGCTTTTTTTTTTCTTTGGTT TAGTTACATTTTTTGTCATTAAAGTTTCAGAAAAATGTAATTTTGATCTCTATAGTTTTAATTGCTCAATCAAGTCATTC TACTTTCAAAAATCAAAATTAAACAAACTTTTAGTCCATATGTTAACGTGTTAACTAATAACTAACTAACGGAAAAAGAC AACATATATCAATTTTTTATGTGGAAAATGACAAATTGTCTTCACCTAAAAATAATAATCTACTTGAACTTTTTCATTAG TTATTGAATGACAAGTTAATATTTAAGCCATATTTGTTCAATTTGGAAAGTAGGGGTGAGCTTCGGGCGGGTTCGGTCGG GTTCGGGCCAATTTCAGCCCACCCGAAAAAAACCGAACAATAATTTATTAGGCCCGCTACCGACCGCTGCTACTTTCGGG TTGGTCGGTTCGGGTAAAGTTGGGTCCAACCTAGTTTCGGGTGGGTTTGGTCGGGTTGGGCCCAAATAATGGGCTACGTT TTTTTTTTGGACCTGGTAAAAAAATCAAGGTTTTTTTTTTAGTAAAACAGACTTGCAAAAAAAATTAATAAAAACTCCAA AATTAATTTTTTCTTGGGCTGTACTAATTTTGGTAAACTAAGGCCTTAGCCCATGACTAAAATCATATTTTTGCTAACAA TGAGTCTGGCTCATTGATAAAAACCTGCACCAAATTAATATTTCATACAGCACATTCCAAACTAGAGTCACTAGAGATCA AACTAATAAATTTTTGAACTTAATTAAAAAGTAGTCATAGGTAAACTTAATTAAAAATTAGGCATAGGAAGCATAAGCAC AACATCAATGGTCATGCGTGAATCAAGTTACAGACCCATAGTCATAGCTTAAATTGCTAAAAAGTAGATAAGTATGTTAT AGTTACAGACCAATCATAGCCTAAATAACTAGGTAGAAAAGTATGCATATGTCATTAAAGCTTTGCTTCTTAAGCAGTCA TTCACCATTCTTCAATCTTCACCATCAAACTTGCATGAATCTTGGGGCACTCTATCAAACTCTTCCAGCCCTCAAGTGAC ATCTAGCATTTAAATTACAAGAGTTAAACATTTTCCTTTGCTGGAAATGTAATGCAGCACAAAATAAAATAAAAACAAAA TCAAAGAGTTACTAATATTACCTAATTCATGTACACTACTAGCATATGAGCTTCAAGGGAATAACCAGTAATTGTATTCC CTGGAAATCTTTTAGGAGCACTCTCCATTAGCCAACAATTCTACAAAGGGAGGGATTGAAGCACAACTCAGTTATATTCA CAACATAATAATAAAATCGGAAGCACAAACAATAACAAATACATAAATACACATACTTTTCAATAGTAGAGCTCCAATTA ATATTCCTTCAATGGTGATCAACACCACATTTTGGCTGCAATAGAAATGAATTGATCAAAACACAAATTCAGTCAAATCT AGCTAACACCAAACATAGAGTAAAAATCAATATCAATAAAATTACCAAAGACAACCAGAACAGAGTAGTAGCATGCCCAT CTTGAGAAAGCCAAAATAAGTCCAAAGAATGCCCCAAACTCAGCCAAAATATATCCACATTGCAACACAATTCGACAACT GCAAGAAGCTATCGACATACTAGCTGCCAACAATGAAGATCACAAAAAAATTAAGATATTTGTCCAAACTAAAAAGAAAG AAACAATAATTCTAAGAAATAGCTTGACTTACCAAAATATGAGTCATTGCACACAATGACTCCAAAAAAGTCTTTCTCAA CTGAAAATTAGCCATAAAATAAACATTTAGTTGAAAAATTAGTCAATTTAAAAAATAAATTGTAGGAGGCAGCAATAAGA AAACTTATTCATAAAATATTGCAAACCATTGAACTTCAGCCAATAGACATTGGCTGTGACTGAGAAGATCCAGCACCAGC AGCAGATCTTCTAGCCCTTCCAGAAATTATCAAGCCTCGAAATTCTACAGAACAAGGAAAGAAAACACATCCATTAGGAA AGAAAACAGATAAATAAAATCACAGTTATGAAAAGAAACTTCTACCTGTTATAACTTTTTCAGATTGGTCAAATACATCA ACAACATCAAGTTCTTTGGGCTGATTGGAAGATTGTCTCATCCAGTTTTGAGTACAATTCAGTTCTTCTGCAACTTCAGG GTTTAGAGAGCTCCTGTAAGTGTCCAAGACTCTACCACCAGTGCAAATTTTCAAGTGGGTGTTCAAGTTTGTGGTGCCAT GAGTCTTGCTATCACACAAATACCTCTTACCACAGTAGTTGCAAGCAGCAGTGGGGTCTTGAACTTCATTTTCAGGTAAT CTGGTAAAGTGCTTCCATATAGAAGTTGTTGTACGCGGACCGCTAGCATTTGGCTTACGCTTTTTCTTAGGATTAGCCCC TTGAACTTCAGGGGGTGGGGGAAGCACAGCAGGATCAGCCATAGAAATCTCAGTCTCAGCACCTTGAGTGGGTTGACTTC CACCAATAGAAGCACCTGCTGGTTGAGTTACATTGGATGGTCCAGCTGCTTGGGTGTCTATTGGAGATGGTGTCGAAGAC AAGTGTTGATTAGGTTGCTCCATCACTGTGTCAATGAATAAGCATGTTAAGTGTGAAGTTCAGCTAGTTTAACTTTCAAG AGTCAATCCAAAATAGAAACAATGATAAATAAGAAAAAAACATAATGAAAAAAAAATCATAACCAACTTAGATATCAAGA CTATGGAATTGTCAAAACAGAAGCCCAAGTTTCAAGTGAATGAATAAGCATGTTAAGTGTAAATTTCAGCCAGTATTAAT TAACTTTCAAGTGTCTTTCCAAAACAGAACCAATGATAAATAAAGAATAAAGCATAAAGGAAAAAATTATAGCCAACTTA GAGATCAAGACCAAAAAGGAAACTTACTTTTACTAAAACCAAGTGCTAGACAAAAACTTTTTACTAATTTCTATTAATAA CAAGGACGAGATAGAAAGTTCCTATAACTTAAAATTGCAGCAGTCAAAAGAATTCCCTCGGTAAGTGGCCCATCACATAT TCTTCATTGTTCATGTAAAGAGCTTTTGGAAAATTGAAACAATGGGGCCACTCTAGTTCATACGATCAAAGGATGACATG TTCATGGTATTTTTGAATTACTAAGGCCTTTCCAAACAACTACAACCTCTCTTTTGACATTTGGTTAGAAAAAGCATTGA TTTTTAATCTGGGTTGCATCTTTTTTATAATAAAAATTTCTTGCAGATGACAAACCTTTACTTTTCTTTTCTTTTTTTAA CTTTTCAATATCATTAACGAAATGGAACATAACATTTACATGTACAAGATAGTTATCCATTTATCCAAGCCAGACAAGGA GGAAAAAACTACAAAGGTAAATCATTGCAGAAAAGGTGCAAAGACAGGGCAACAGATATATAATTAGCAAGCTCGCAAGG TTTAGACAAAATTAAAAAATAAAAATGGGGTTAGAAACTTACCAAACGAGATTCACAAGTGAAAAAAAGTTTGAAGATTA AGTTGTTGCTCCAATATGGTCTCCTGGCCTCCTAATGGCATCAGACAAAAAGAAGATAATAAGAACAGAGATCAAGAAAA CAGAAAATATAGAACAAGACAACGTAACAGAGATTGGAAGGGAAGCTAAAAAACAAGTTTTCATTTCAATGATTTATGAA ACCAGAAACTGGTCAAGACCTTAGAGGATCTGAAACCTTACCTTTTCTTCCTTCAAACAGCTTTCGTTTCACTGTTCAAG CTTAAGGAGGGTGAAGAATGGAGGGGAATACCAAGGGAAATGAGGGAATGGGCGGCGGTGCAGGGTTCAAGTTCTAGGGT TTTGCCATTTTGGTTTCTTTCCTAGGGTTCAAGTTCAACTACAGCCACTGAATGAATGAAAATTGTGAGTTTTGAATTTA TATCTAGGGTTGGGGTTCAATTAATCAGACATTCAACTTGTGGTTGCAAAGCCACTACATGTACCGTATAAACATTGGGC CTCACCAATTTGTGGGCTTGTAACAAGGAAAAATCTTTTATTTTTAATCGGGTTGGGTCGGGTACCGACGGATTTATTGA ACCCACCCGAACCCGACCGTGATTACCCGCATAGAACCATCTGTCCAGTTTTTAATACCCGTAAACCGACCCGACCCGAC CCATCAGTGCTTTTAAAAGTCGGGTTTTCCGGGTTTGGGTCGGGTCGGATATTTTGCTCACCCCTATTGGAAAGTTGAAT ATCTTAATTTGAGCAATTGAAACTACGAGGACCAAAATTATCTCTTTATAAAACGATTGGAACCAAAATTGCAGTTAAAC ATTTTTCTTTCTACTTCCTTTCGAGATATTACTAAAACCATGAAGATCATTTGTGAACAAGAAATAATTTTGTGCGTCTA AATTGGAATGCAGGTGAAGCAGAAAGAATAAGGAGGTGCAACGGTTGTGTGTATGCTCTTAAAGAAGAACCACATATCCA GCGAGTGTGGTTGCCTAATGAGAACTTCCCTGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACCATG GTGTTATTGCCATCCCAGATATTTGGTATCACCATGTAACATCAAGGGACCAATTCATTGTTCTTGCAAGTGATGGGGTG AGTGTTATTTGCATACAACAAACACTTATGTTTATACCAGGGTTTTGAATAGTCGTTGCGGTTGTGTTGTGGAATTGCGG ACAAATGTGGGTTGATACAATGACAATTGCAATCGCGATGCCCATGTGGGAACTTAAAACTCATTTACGTTGCAGTTACA TTACATACCAAAACCTAGAACCCTAGTTTTGTTAAGATTCAAAAAAAGAAAAATTGTTCCTACTATCGTGGAAATAATTC TAACATGTTTGAATCCGCTTCTATTTCTTCGAAATTAATTATTCACCAATAAGCTAGTTATAAAGGCTTATTATCCCCAT GATTAATTTTGACTTCAGAAACATTTGCCCAATAAGATTTATAAACATGTACAAAGCATCATTTTGGCACAAGCATTCTT TATAGACTTGTTTTTCCTGCTTGTAGGTGTGGGATGTGCTAAGTAATAGTGAGGTTGCATCAATTGTGTGGATGGTAGAC ACTGAAGAGGAAGCAGCAAAGGCAGTTGTGGAAGCAGCCACTGCTGCATGGGAGAAGAAGTATCCTTCCTCTAAGGTAGA TGACTGTACAGTGGTTTGCCTCTTCCTGCAGAAGAAACCACAATACTCTGGGCATATGAAAAGTGAAAAGTTAGGTTAAT GCCCAGTGACAAAATAGGCTCTTTGTTTTACCATTTACAGTAAAAAAACATTTACATTTCCATGTCAATTATGTTCGGGC AGTTTTTTCCCTTGGATGAAAGTACTTATACAAATAACTTAGCCATATTGGGATATATGTTGACACCGGTGCAAACATAT GTTAACACACACTTCGACATAAAAATAAATAAACTTTTCTTATGAATTAAGATAAAATTCTATTTACGTTGCACTCATCG GATATTTAAACGCATTGAATTTACATTTATTTTAAGTGAGAATTTTACTTTTTCATTATGAGAAATTCATTCGAAGTGTG AGACATACAAAATATATCTATATTTATTTACCCCTCAAGTAATTCTAACTATCCACACAAAATTAATTTTCGAAGTTACT TTCAAAATAACATTCCTAATCACAGATTCATTCTCAACTTGAATTTTACCAAACTTAATTATAATAAGCTTCAACTTAGT TTTTCAAAAAAAAAAAACCTTAAACTACTTATACTGAACTTGAAAACAAATTTACCCTAATTAGTAATTACCTTCCAGAT ATAAAGGCCATGAACAATGTTGAATTGTCAAACCACCTAAATGATGTTAATTGAATTAGCAGGTAACAAATGTAGGGTCA AGCAATGGAAATTGAGTAAACCCACGAAAGACATTGCATTGCGTAAATAGTTAATTTACCCTAAAATATAAAATGATTAC ATAGAGAACTACAAGATAGAACTACTTTGAGGGCAGATACAAAGACTTGTCATCAATGTTTCAATTTTTTTTTATATTTT AAAGATTAAATA
CDS sequence (LotjaGi5g1v0040200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTATCTGCATATCCCTTGCATCTTCAGAGATTCATGGGGTCCCTGAAGAAGTTCATGATGAGAATGTGACAATATT TGAATCAAACAAGGTCCTAAATGGGAATAAGAGACTTTGCTCTGTTTATTCTAAACAGGGAACAAAAGGACTAAACCAAG ATGCTGCCTCACTTTACCAGGGTTACGGGATGGAAGATGGAGCATTTTGTGGCGTTTATGATGGACATGGAAGATATGGA CACATAGTGAGCAAAATGGTAAACAGTCATTTGCCTTCACTCATTCTGAGCCAAGGGAATGCTCCTGTAGAGATTAATAA AATAGAAAATGGTGATGACAACACCCCAAGCAATTTTAACACAGTGGAAGATGACTTGGCTCCAAAGAACTTTCAGAAGT GGAAGAGAGCCATTGTTAGTGCTTTCATGGTGATGGACAAGCAGGTTAAGCTACAAGAGAATCTAGACTGCTCTTGCAGT GGAACTACTGCAGTAGTTGTCATTAGACAGGGTGAAGGTCTTATCATAGCTAATTTGGGTGACTCAAGAGCTGTCTTGGG AACAATCCATGATGAGAAACTCACAGCCATTCAATTGACCACTGATTTGAAACCTGGATTACCTAGTGAAGCAGAAAGAA TAAGGAGGTGCAACGGTTGTGTGTATGCTCTTAAAGAAGAACCACATATCCAGCGAGTGTGGTTGCCTAATGAGAACTTC CCTGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACCATGGTGTTATTGCCATCCCAGATATTTGGTA TCACCATGTAACATCAAGGGACCAATTCATTGTTCTTGCAAGTGATGGGGTGTGGGATGTGCTAAGTAATAGTGAGGTTG CATCAATTGTGTGGATGGTAGACACTGAAGAGGAAGCAGCAAAGGCAGTTGTGGAAGCAGCCACTGCTGCATGGGAGAAG AAGTATCCTTCCTCTAAGGTAGATGACTGTACAGTGGTTTGCCTCTTCCTGCAGAAGAAACCACAATACTCTGGGCATAT GAAAAGTGAAAAGTTAGGTTAA
Protein sequence (LotjaGi5g1v0040200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGICISLASSEIHGVPEEVHDENVTIFESNKVLNGNKRLCSVYSKQGTKGLNQDAASLYQGYGMEDGAFCGVYDGHGRYG HIVSKMVNSHLPSLILSQGNAPVEINKIENGDDNTPSNFNTVEDDLAPKNFQKWKRAIVSAFMVMDKQVKLQENLDCSCS GTTAVVVIRQGEGLIIANLGDSRAVLGTIHDEKLTAIQLTTDLKPGLPSEAERIRRCNGCVYALKEEPHIQRVWLPNENF PGLAMSRAFGDFMLKDHGVIAIPDIWYHHVTSRDQFIVLASDGVWDVLSNSEVASIVWMVDTEEEAAKAVVEAATAAWEK KYPSSKVDDCTVVCLFLQKKPQYSGHMKSEKLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 344 | 330 | 8.3E-141 | – | |
| PANTHER | 15 | 344 | 330 | 8.3E-141 | ||
| Gene3D | 21 | 340 | 320 | 8.7E-77 | ||
| SUPERFAMILY | 27 | 338 | 312 | 5.23E-60 | ||
| SMART | 30 | 335 | 306 | 2.7E-65 | ||
| CDD | 38 | 298 | 261 | 2.15025E-67 | ||
| ProSiteProfiles | 39 | 337 | 299 | 42.408 | ||
| Pfam | 64 | 316 | 253 | 5.6E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0040200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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