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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0041300 |
| Transcript ID | LotjaGi5g1v0041300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G44640.1 beta glucosidase 13; Swiss-Prot: sp|B8AVF0|BGL12_ORYSI Beta-glucosidase 12; TrEMBL-Plants: tr|B2ZUU0|B2ZUU0_LOTJA Beta-glucosidase D4; Found in the gene: LotjaGi5g1v0041300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:6917070..6923742) extracted from Lotus japonicus Gifu genome v1.2.
TTTAACTGGACTTAATCTAACCAAGTTTCGCTTATAAAAAGGCCCACATTCTCACACAAATACTCACTCTTCTTCATCAC ATTCACTTGATATGGCACTCAACACGTTCTTAGTTTTCCTACTTCCCCTCTTGATTCTTCTTGTTTGCACATTACCTTCG TTTACTTTTGCACAAGAAGTTTCTCCCATTGTTGATGTTGCTTCACTTAATCGCAGCAGTTTTCCGAAAGGCTTCATTTT CGGGACAGCATCCTCAGCATATCAGGTATGGGTCTTTAAATACTAGGTTTTTTTTTTTTGCTTCGGAAAATTAACAAACA AACAACACAAGGCAAAGAAAACTAAGGACTCCTAAGCTATCCTTCAATAGATTGAGTTAATAAGAAAACACAATATTTGT CTCATTAATTCATGAAAAAAGTTCTATTTAATTTTTGTTTCGAAGTCGGTACTAATACAACACATTAACTTTGAATGTGA AGATTTGTGCTCATGGACATTACCTCCTGGACTAATGACATTCTATGGATTAACACATCAACTAAATAACTCATGGCATG TACTTGGTTTGGGTTACAATCCATGGTGTAGATCGTTCAGAGATTGAAAATGCATATGAAGTTCCTTCATTGTACAATAC TTGAATGCTGAGACTAGCTGGACTAGAAATTAAATACCAATTTTATGTATTCTTTCAAAAAAAAACTACAGTATTGATTT GGAAATAATGATTTAAACATCCAAAAATATCATGTTTGAATTAGCGTTGGGCGCATAGTACAAATTAAATCACCGCCATA TAATTATGCGCTCCCCTCCCCATGAAGAATGAAACGAGACTGTATCTCTTCATGTGCATTCAGAGAGCTAATAATGATAC AATTTGTTTTCTCTTGTTTATACCGACCACTTTGGTATTTAAGATTTTCCAATCAAAATCACATTCATTAAGTAATTAAT TTTGTGTGCTCATGATATGTGTTTGCAGTATGAAGGTGCGGCAAATAAATATGGTAGAAAACCAAGTATATGGGACACCT ACGCCCACAACTATTCAGGTATATATCTATTTCAAGAAATTCAAGTGTGAGTAAGAAGTAATATGAGTAAATTAAAGACT ATATATAAGCGTGAACACGCATACTTAAAATTTAACTGTAAATAATGAGTGGCTTATATTTGAACTTTTTTCTGGGTTAT GAGGGGTTGAATTATAAAAAATTAGATATATATATATGTTGCTATATGACTGAAGATCTTGATGGAATGAATATATAGAA CAAGTGATATAAGTTTTATTCTTATTTTTTCCTAACAAAGTTGCTCCTGCCCGTTTTCATCGTTTGGTGCTTGATTCAAT GTTACTTGGAGTTTATCTAGGTGTTTATCAGGCGATGTGTTTCAAAAGTTTTACTTTTGGGTTCACCATAGCAATATGAT TTTGAGGCTTTCTTATGTATTATTGAGGAGACTATACTCATTTTGTTGAGTGTCGTTTGTATTATCGACCATTCATCTAA TATAAATTTTTGCTTTAAAAAAAATATTGGTTGCAAACGTAATCTAATGATAAAACACATTAAATAAAAGAAATAATTTA ATAATTATTAGTTTATGAGTTTAGTTGATATGCAACCATGTAAATCTTTTGAAATCAGAATATTTTGACACATAAGATAT TTGAATAAAAAATTAAAAAAACAAAAACTGAATCCTTTATTTGGTTGCAAAATAAACCTGTATCCTTTCCTAACTGTAAA CGGCTTTAAAAATTCTGGTTATACTTTATAAATTCTGGCCAGAAGCAAATGAATTGGCAATGCTTATGGCCAGATTATAT AAACCAATAATCTTGGATGGTTTCTTTACGGAATGCAAATCATGGTGTGGTGAGAAATGGGAATTGTATGACAATGGATT TCACGGCTGTCAAGGGGTGATATATAAGGACAAAAAACAATTGTTCAAAATAGATCGTTAATAAAGAACATATATAGTAC TATCTTAAAATAAAAAATAGGTGATTATCTTACATATTCTATAAAATTTTACTTTTGAAAAATAAAACACTTAAAAAGGT ATCATTTTTTTCTTTCCGAGTTCACTGAGACAGTGATTCGTTATTTTTACAAATATATTTTTGTTTGAATTTCTTCCGCA TTAACACCCCTACTTTCTACTTTAAAAAATAAGGTGTAAAGGTAGTTTACGACTTTTGGTAGTAATATTCAATCATTTTC TTTACATAAACTAATTAATAATTAATGTGCAATATGTAGAGCGCATAGTAGACAGAAGCAACGGAGATTAATAATTAATG TGCAATATGCAGAGCGCATAGTAGACAGAAGCAACGGAGATGTCGCAGTAGATGAATATCACCGCTACAAGGTATGGTTA AATTTCGAATGACGACAATAAATATTCAACTAAAGTATCCTCCACATGCGACAAACTACAGTAAAAAGGCCAATAATAAT CAACATATCCCACGAAATGATTATAAAATGATAGCCTTAAATACTTGTATATTATTACAGGAAGATGTTGGGATTATGAA GTCTATGAATATGGATGCATACAGATTTTCTATTTCTTGGTCTAGAATCCTTCCAAGTGAGTTAATTAATTAAATATCGA ATATTGACTTTCAAATCCTATTTGTTAATTTTGCTTAATTAGATGGATATTCGGATTAACATTTTCTTAATCTTAAACTA TTAACAGAAGGAAAGCTCAGGGGAGGTATCAACCAAGAAGGAATTAAATATTACAACAATCTCATCAACGAGCTGCTAGC TAATGGTCAAAATTGAAATTCAAAATTGGCATTTTATTATTTTCCCTCAAACAAATCGATAACAATTTAACATAATTAAT TGGACGTTATTACTGCAGGTCTACAACCATATGTGACACTTTTTCATTGGGATATGCCCCAAGCTTTGGAAGATGAGTAT GGTGGTTTCTTAAGTCCTCACGTTGTGTAAGTGTTACAAAATTTATGTCGGTAATGATACGTGTATCACAAATAAAACAT ACACATCAGAACATTATTTTTTCAATATCTTTTCCGATCACATTATATCACATGCCAAATTTATGACATATCTATTTTTT ATTTTATCTCTTTAATGGTCAACATTCACTAGTCACCGGATTACACCAATCTTTCGAATTCATTTTCCGCCCAAGTTAGG CCTTAGCCCCGTCCCTTTTTGTAAATTAGTAAAAAAAACACAAAAAAAAAATATTAGCGCAATTCTATTGTGTGACCAAG TTAAAAATTAGTTTATTGGTGAATCTTATTTTTACTACTAATATATGTAGTACATGTTATTTACAATTAGCTCCTTATGT GCTAATATTAATTTACAAAAAGTTATTTTAACTTGTGAAGCATATTTTTCTTAGTCCAGAGTAGGCAAAGTCATAAAATA AATATTTTTAATTATTTTCGTTCAGATAATTTAGTCTTTTATGAATAAGAGTATAGTTCCTTAATCATGAATATATAACA TCAATTTAGTTTTTCAATAATATAAATGTTGAGTGTGAGTTTGAAGTTTCACAATGGATGGAAGTGAAGATGTTGAAGAG TATATAAGAGATAATAAGATCCACAAATTCAATGTCTTAATGTTTTGGGTAAAGATGTGGTGTATGTCTCTTGATAATCT TTTCTACTGGCCAACATAATGTGTAGATAGATCTCACGGCCGCTGATGAGGCAAGAATAAAATGACGTTTAACCCATCAG TTTCAGTCATATACTAGAAGGGTGATGTATATATTATTTTTCATATCTCACACAAATTTATTTTCAAGGTCAAATTATGT TCTCTCTATAATAAATTATATATGCACCTAAATTGAAGGTATGTATATAAATAAATTTATATTTAACATGTCATGGTTGA TTTTTCAGAAAAGATTTTAGAGATTATGCGGAGCTTTGTTTCAAAGAATTTGGAGATAGAGTGAAACATTGGATTACTTT GAATGAACCATGGGTTTACACTAGCAATGGCTATGCAGTTGGGGAATTTGCACCAGGTCGATGTTCTAAATGGTTGAATC GAAATTGCACCGGTGGTGATTCAGGAACAGAGCCATATTTAGTTTCACACAACCAACTTCTTGCTCATGCAGAAGTTTTC CATGTGTACAAGAAGAAATATCAGGTTCATTACACTATTGTGAATTAATGACTAAATATACTTACTACTATATGTGTTGT TGGGGATGTATGACATGATAATATATAGTATACTTAATGTGAGAATGATATGAATAAATTATGACTGTTAGATCTAATTA TGAAGATTAGCACATGAAGTCATGCATGTGACGTGACATTTTTAAGTGTCACATGAACATTAATAACTTTTAATCTGTGA TCATTCATGATTAGATCTAAAAGTCATGATTTATTTTTATCATTCTCATATAAAAAAGTCATTCTCATAACGTACATCGT TGGTATTGTTAGCTAACTTACTACCAAGTTTAAACTCTCTATGCAGGCATCTCAAAAGGGTATCATAGGAATAACATTGG TGACTTATTGGTTCGAACCACTTTTAGATAACAAATATGATCATGACGCTGCTGGACGAGCAATTGACTTCATGCTTGGA TGGTATGTGCTGCAACGCTCTCAAATAATATATTATTAGAAGTACAAGGACGCTTCAATTCATTACAATACCAACATAAG AATAAATGACAACATAGATTATGTTGCACTACTTAGTGCACATCAAATTAAAACCACTCCCGACAATCCCTTAGAACTAG AAACCCATTGGAAGCTTAATCTAGCTCACTTAAAATACACCTAAAGTCAAGTAATTTCCATGACAATAGGTTTGTTAATT ATGTGCTAAAAGTAATGTGTAAAGAAAGTATTTTAACTTGTGATCAACCGACTTATTTTTCATGATTCATCGAGTCAATT TTCATTTGTAAACAATGATTGCAGGCATTTGAATCCACTGACAACAGGAAAATATCCACAGAGTATGCGTTCCCTAGTTG GAAACAGATTGCCAGAGTTTTCTTTGAAGCAAGCTAGGCTAATTAATGGTTCATTTGATTTTATTGGACTAAATTATTAC ACCACTTATTATGCTACCAACGCATCTTCTGTAAGCCAGCCCAATTCTATCACAGACTCTCTTGCCTATCTTACACGTGA GCACATCTTTATCAATCAATTCTTTAAATTATTACTCCATATATATAAGTTAATTTGATAATTAATAGCAAAATCTCTTG TTTCTTTTATGGTAGATGAGCGTAACGGGAATCCCATAGGTCCAAGGGTATGTATATGACCATATCAATGTGTAGTTGTA TAATGTCCATGTTAAAATTTGTTGGGTAATGATCCATAGATGTACGATTTTTTTTAACACCCAATGGATATACTTTTTAA TGTGATTTAAGCCACTAAATTTGTAGCGGTTCAGACCACTGCTAAGCGCATGTCCATCGGATGTTCGGAAAAATCTATAT GTCTATGTAACATTTTTGAAATTTGTTTGACTATAGCAATAACTAATGTTTCTAATCATGTTTGTAGGCTGCTTCGGATT GGTTATATATTTATCCAAAAGGACTTCAACAATTGTTGCTCTATATCAAGAAAAATTACAACAACCCTCTGATTTATATT ACTGAAAATGGTAAATCCATCAAACTTCTCATTTATAATCACACAATATATAATCGAATGTTTACCTTGAGTTTTTTTAA TATATATTAACAATTATCATGTACGAAAGAATTTATATTTTGCATATTGCACTTGAATGGTAGGTATGAGTGAGTTCAAT AATCCAACACTGTCACTAGAGGAAGCTCTTATAGACACTTTCAGAATTGACTATTATTTTCGACATCTCTTTTATCTTCA ATCTGCAATAAGGTGAGTTATTGTTTACATGTATTTTTTGAAAAATGATTTTCTATACCTAATTTAATACTTTCATTTTG GTGAATTTTAAAGGAATGGATCAAACGTCAAAGGATATTTCGCATGGTCATTGTTGGACAATTATGAATGGTCTTCAGGT TATACAGTGCGATTTGGAATGAATTTTGTGGATTACGAAAATGGATTGAAGAGGTACAAAAAGCTATCCGCAAAATGGTT CACGAACTTTCTCAAAAGATATTAGACTTTGGATGACTAATTGTTCTACAAATTATGCAATGAAGTACATCATTCAAGTT AAGCTTTCAATAATTATATGATCCTTCGACTGAATCCGCTTCTGGTGCTGATGTGGGTGGGTTGTTGTGATCGTATTTTG TTTTTTGTTGTATCCATCTGCTTGTTCCAACTGCAGCGGTGTGGACTGTGGTACTGCTCAGGTCCTGCTTTCGTCTTGTT GGGTTGTTTTAGTGGGTTGTTGTTATGTTGCCTTTTGTACCTTTTTGTTCCTTGTAACTTGGGGGATTGAACTCTTTTAC TCCAATGTTCTATTTCTCTTTGTATCTGTTATGTTTCTAATCAATAAAAGTTTCTGTTATCTAAAAAATTATATGATCCT TCGTCTTTTATTTTTTGGCTATATGGAGGGATCGTCCTTCATTATCAAAGTCAAAGGAAATTATATTCTTTTAATAATAG CTATTTTGCCATACATTTATGTGCATTTGTTTG
CDS sequence (LotjaGi5g1v0041300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTCAACACGTTCTTAGTTTTCCTACTTCCCCTCTTGATTCTTCTTGTTTGCACATTACCTTCGTTTACTTTTGC ACAAGAAGTTTCTCCCATTGTTGATGTTGCTTCACTTAATCGCAGCAGTTTTCCGAAAGGCTTCATTTTCGGGACAGCAT CCTCAGCATATCAGTATGAAGGTGCGGCAAATAAATATGGTAGAAAACCAAGTATATGGGACACCTACGCCCACAACTAT TCAGAGCGCATAGTAGACAGAAGCAACGGAGATGTCGCAGTAGATGAATATCACCGCTACAAGGAAGATGTTGGGATTAT GAAGTCTATGAATATGGATGCATACAGATTTTCTATTTCTTGGTCTAGAATCCTTCCAAAAGGAAAGCTCAGGGGAGGTA TCAACCAAGAAGGAATTAAATATTACAACAATCTCATCAACGAGCTGCTAGCTAATGGTCTACAACCATATGTGACACTT TTTCATTGGGATATGCCCCAAGCTTTGGAAGATGAGTATGGTGGTTTCTTAAGTCCTCACGTTGTAAAAGATTTTAGAGA TTATGCGGAGCTTTGTTTCAAAGAATTTGGAGATAGAGTGAAACATTGGATTACTTTGAATGAACCATGGGTTTACACTA GCAATGGCTATGCAGTTGGGGAATTTGCACCAGGTCGATGTTCTAAATGGTTGAATCGAAATTGCACCGGTGGTGATTCA GGAACAGAGCCATATTTAGTTTCACACAACCAACTTCTTGCTCATGCAGAAGTTTTCCATGTGTACAAGAAGAAATATCA GGCATCTCAAAAGGGTATCATAGGAATAACATTGGTGACTTATTGGTTCGAACCACTTTTAGATAACAAATATGATCATG ACGCTGCTGGACGAGCAATTGACTTCATGCTTGGATGGCATTTGAATCCACTGACAACAGGAAAATATCCACAGAGTATG CGTTCCCTAGTTGGAAACAGATTGCCAGAGTTTTCTTTGAAGCAAGCTAGGCTAATTAATGGTTCATTTGATTTTATTGG ACTAAATTATTACACCACTTATTATGCTACCAACGCATCTTCTGTAAGCCAGCCCAATTCTATCACAGACTCTCTTGCCT ATCTTACACATGAGCGTAACGGGAATCCCATAGGTCCAAGGGCTGCTTCGGATTGGTTATATATTTATCCAAAAGGACTT CAACAATTGTTGCTCTATATCAAGAAAAATTACAACAACCCTCTGATTTATATTACTGAAAATGGTATGAGTGAGTTCAA TAATCCAACACTGTCACTAGAGGAAGCTCTTATAGACACTTTCAGAATTGACTATTATTTTCGACATCTCTTTTATCTTC AATCTGCAATAAGGAATGGATCAAACGTCAAAGGATATTTCGCATGGTCATTGTTGGACAATTATGAATGGTCTTCAGGT TATACAGTGCGATTTGGAATGAATTTTGTGGATTACGAAAATGGATTGAAGAGGTACAAAAAGCTATCCGCAAAATGGTT CACGAACTTTCTCAAAAGATATTAG
Protein sequence (LotjaGi5g1v0041300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALNTFLVFLLPLLILLVCTLPSFTFAQEVSPIVDVASLNRSSFPKGFIFGTASSAYQYEGAANKYGRKPSIWDTYAHNY SERIVDRSNGDVAVDEYHRYKEDVGIMKSMNMDAYRFSISWSRILPKGKLRGGINQEGIKYYNNLINELLANGLQPYVTL FHWDMPQALEDEYGGFLSPHVVKDFRDYAELCFKEFGDRVKHWITLNEPWVYTSNGYAVGEFAPGRCSKWLNRNCTGGDS GTEPYLVSHNQLLAHAEVFHVYKKKYQASQKGIIGITLVTYWFEPLLDNKYDHDAAGRAIDFMLGWHLNPLTTGKYPQSM RSLVGNRLPEFSLKQARLINGSFDFIGLNYYTTYYATNASSVSQPNSITDSLAYLTHERNGNPIGPRAASDWLYIYPKGL QQLLLYIKKNYNNPLIYITENGMSEFNNPTLSLEEALIDTFRIDYYFRHLFYLQSAIRNGSNVKGYFAWSLLDNYEWSSG YTVRFGMNFVDYENGLKRYKKLSAKWFTNFLKRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 19 | 14 | - | – | |
| PANTHER | 14 | 514 | 501 | 1.2E-278 | ||
| PANTHER | 14 | 514 | 501 | 1.2E-278 | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Phobius | 28 | 514 | 487 | - | – | |
| Gene3D | 28 | 513 | 486 | 3.4E-223 | – | |
| SUPERFAMILY | 32 | 512 | 481 | 9.99E-190 | ||
| Pfam | 42 | 512 | 471 | 6.8E-159 | ||
| ProSitePatterns | 48 | 62 | 15 | - | ||
| PRINTS | 342 | 356 | 15 | 4.1E-23 | ||
| PRINTS | 416 | 424 | 9 | 4.1E-23 | ||
| ProSitePatterns | 416 | 424 | 9 | - | ||
| PRINTS | 439 | 450 | 12 | 4.1E-23 | ||
| PRINTS | 460 | 477 | 18 | 4.1E-23 | ||
| PRINTS | 484 | 496 | 13 | 4.1E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0041300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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