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LotjaGi5g1v0044800.1

Overview

Field Value
Gene ID LotjaGi5g1v0044800
Transcript ID LotjaGi5g1v0044800.1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT2G26200.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q6AXU8|METL6_RAT Methyltransferase-like protein 6; TrEMBL-Plants: tr|A0A151SVB8|A0A151SVB8_CAJCA Methyltransferase-like protein 6; Found in the gene: LotjaGi5g1v0044800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:7580828..7585947) extracted from Lotus japonicus Gifu genome v1.2.

ACTAATTTTTTTAAACTAAAAATTAATTTAAACTTTTTAAAATTTCAAAACATAAAACTAAAAATCAACCCAATTCAGCG CAGACATAAAACTTAGCCGGAAGAAATAGATCTGAATAGGGATAAACGCCGAAACTAACACATGCTTGATCTCACTTGCT GCACCAACACTCCCTTGCGTCCCAAATCAATGGCGGCATCATCGGAGGCCCATACCCAAACCTTGGAAATTTACCCGAAG AAAGTTTCTGGGGTTTCCCCCTTTTGGAGAGACAAGTATGAAAGAGAAGCCAAGAGGTATTGGGATGTCTTCTACAGACG CCACAAGGACAAAGTTAGTTTGTTTGTTTTCTCAATTCTTCTCAACAATCTCACGTCCGTCAATGCAAATTTTCTAACTA ACTAACTAACTAACCTGTCTATTCAGTTTTTCAAAGATCGCCACTACTTGGATAAGGAATGGGGCGATCACTTTTCCGTG AGTCAAATTAAATAATTAATAATGTCTTATATTTCAATTTTATTTTTTATTGTTTTCGGTTTGCTAATGAGTTCAATGAT TTTTCAGGGAGGAAGAAAAGTGATTTTAGAGGTATGGTGTATAAGCTTATCATATAAATTACTCAAATGATCAACATATA AGTGATGTTGTTTGCTAAACAGGCTGGTTGTGGAGCTGGAAATACTATCTTTCCTGTCATAGCTTCTTATCCGGATGCTT TTGTTTATGCGTGTGATTTCTCGCCACGGGCTATCGACTTGGTTAAGGTTTGAGATCTCATTTTTTATAAACTCTCATTC AAATCATCATTTGCTTCAATGAATGTGTTTTCTTTATTGCAGGCGCATGAAGACTTCAAGGACTCCCATGTTCACGCTTT TGTCTCTGATTTGACAGCTGATGATCTGTGCAAGGAGATTCTTCCATCTTCTGTTGATATTGTTACAATGGTATCTGAAA TTCTGAATGAAAGTTATAATGTTTAAAGTTTATGTTGAGTGGTTATTGGATCACATTTGCTTTTATTTGCTACAAGCTGT CATTTTCTTTTCCAATTTCAGATAACTTCTGTGCTAATATCAATTTATTATTGAGAACTAGTTATGGTTCTATGTGAGTA GCTGACATTGTAAGCAGATTTTTATGTTATCTGCAGTTTCCCCTGAAAAGATGCCTCTAGTTTTGCAAAATGTTAGAAAA ATTATCAAGGTAAGAAATTGTTTTATTTCTTACTGCAAATTGATTACACTTCTTCTGAAACCTTGCTTGAAGTGTTAGTG TGGTGAAAGTCTTATCCTTTCTCCATTTGCAGCCAAATGGATATGTGCTGCTCCGAGACTATGCTACTGGTGACCTTGCT CAGGTTGATTCTGCTGCTCTCTAGAAAATTGACTAGTGCACAATTATTATGCTGACAATATTCTTCTCATAATTATTACT GTGATGATTGGAAGCATCCAAATATGATTCTTATTAATGATCTGTACTCTTAGTATGATTATGACAAGGCGAGGAAAGTA ATTTCATGCTGCATCTTTCTTTTTTAGGTTAGAAGAAGCAATAGGCTAGTATTATATGATTCGGGTGATTTTGTGTCCTC CCCGTATACTTATACAAGTAACCTTACTCAATGTAAAACTTTTGGGCCCTTACTCATTAGGTAAAATATCGTGAATCATC AAACAGTTTGCCAATTTCAGTATTTCTTTTGTTGGAAAGAAAAAAGTGATGTAGATGTAGGTTGTAGATCTACAAGAACC CCATGAAATCCCAGGATCTAGCTTGCTTTAGTTTCAAGTAAACATCAAAACACATTAGAATTCAAATCAAAAGGAAAGAT AATATGAAAATGGAAGGAGATTAGAAGAAGGAAGGCGCCACATTCTCCATGAAAGAGTTGATAAGCCAAGTGTAAGGACA CTAGATAATTCCCAAAGCAAGTTCTCCAAGAGAACTCTTACAAGAATCCAAATTCTTTTGAAATGATTCAAAGTTATCAA AATGTACATGAGATCCTCCTTATATAGAGGACTGGTCGACCATATGGATGGGCCTAGAGATGGAGCCCATCTTGGTTCCA TCTAAGGTAAACTCCTATCATGCTAAATGGGCCACAATACAAGCCCAGCAAAGAAAGATACATCCTAAAATGCTAAATGG GTCAAAATACAACCTAACAACGGAATACAATCAAGAAAACACAAAGAAAAAGGATTTCCTAAGAGTTTAATACTCAATAG AAAAAGAATAATAATCATAGATGGACATGCCATCTCAACAATTTCCGTTAGCAATTTATCGGAACCCATATAGAAGGACC CAATTTACTCACGCCAATAAATTCTGGGATCAAAATCGCTGGTTTTAAACATTGGGGATCCAAATTGCACAATCGTGATA GACCAGGGACGAAAAGTGCAATCAAGCCTAGAATTAAACCCAAACTAAAAACATCATGTCTTAAACAATAAGTCCAATAA CCTTGACATGGTTCCTCCCAAACCATCCTTTGCCAAGTATGTATCAAAAAGTGTTTGAGTATCAAATATATGTTGATGTG TTTCTTTTTGTTTAAGCAACTGATGATTTATAATGTTTTTCTGTTCTATAGGAAAGATTCTCTGGAAAGGATCAAAAGAT CAGTGATAACTTTTATGTTAGAGGTGATGGCACTGTAAGTATTCAACTTTGTCCTTGTTATCATGTAACTTAGTTAATAT GTGTGTTTCTTCTTTTCTAATGCAAAACTCTTTTGTTTCCTATGCAGCGTGCTTACTATTTTTCAAATGAGTTCTTGACA AAAATATTCAAAGAAAATGGTTTTAATGTTCACAAACTTGATGTGTGCTGCAAAGAAGTTGAGAATCGCTCAAGGGAGTT GATAATGAAACGGTAACATATTAAATAACACGTTCGCTTTGCTCATGTTCATATAGAATGTATTAGTTTCTGTGTTTTTG GTTCAGGTAGCCTATCATATAAGATGCTTTGTTGAACTTCTGTGGGTCTAGATTTTTTAGATATGATGTTTCATTTTTTT TCCTATTCGCCACAACTCCCCCAGCCCCTCTTTTATTTGCCATTTTGACTGAAAGCATTATTTTTTATTCTCCTTTGGTG GTTTTAGGCGTTGGGTCCAAGCTGTATTTCGCGTTTCAGATGATTCCAACTCTTCTTCCAGTAAAGAAGCTCAGGCCAAT CATCTTGGTAGTTATAGTATTGAAAAGGAAAGCAAGAAAAATAATTTAGATAGTAATTTAAATGACTCTGCCGTTGACTT GTCTGAGGGACTCGCACTTGACATGTTTGGAGTCTTACCTTCTAGTGAGTATGAGGTAAGACTGTCAGCTTTACTTGGTT GTTGCAGATTCTATCTAACCCAAGAAAGAGAAAGAATCAGATTCCATGCAATTATTTGTTATTTAATTATTTTAATATGT TCGATATGATGTTGATGCTTTTCTTAAGAAACAATTTCTGAAACATGTTTTTCAAAAGAAGGGGAAAACTGTTTGAAGGA AATGTTTTACGAAGTTGAACGACCTTTATTTGAAAACTAAAAGTAGAAACAGAAAACAGTTTCGGGATTTTAGTTATAAA AATTTGAAAATAAGAACTGAAATTAGTTTCCTGTTTAAAACTGAAATTAGTTTTACAAAACAGTAATCAAACAAGCCCTA ATTTCTCTTCATTATTATTCTCAATTTTGATTAGGCATTTGCCCAATTTTTCTAATATTGATTTCCTTGTTTGCTGATAT GGTTTTTGTTTCTTTATCCTGTTAGATGATTGAGGTAAACCTTAGAGGCTGGAGTTTCAAGATTAGTTTACTCTCAAAAG AGTATCAACATACCTGCAAATCAACTGGTTTGATGCTGTGGGAATCAGCCCGATTGATGGCTTCTGTCCTTGCAGAAAAT CCCAATATTGTAGCCGGAAAAAGGGTCTTGGAGTTGGGGTGCGGCAGCGGTGGAATCTGCTCTATGATTGCGGCTAGATA TGCTGATCTAGTGGTTGCTACTGATGGAGATGGTTTTGCTCTTGACCTGCTCACCAAAAATGTTGAATCTAACATTGAGC CGCATTTGCTGACTAAACTAATTACAAAGAGACTGGAGTGGGGAAACGAGGACCACATAAAAAGCATAAAGGAAGTGAAT CATGGAGGGTTTGATGTCATCATGGGCACAGATGTCACGTACATTCCGGAAGCTATATTGCCCTTGTTTGCAACGACAAA AGAACTGATTGCTTCCAGCGGAATCAATAGAGATGACGGTAATGCTCCTGCACTAATTCTTTGCCATATCTTTCGCCGTG TTGATGAACCGACCTTGCTTTCGGCCGCGGCACAATTTGGTTTCAGATTAGTAGACAAATGGCCTGCTGGAATTTCAACC AAGTTGTCTCAGAGCATTATCAATGATTGGTTTGTAGACAATGGTTTAAAGGATGATCTTCCTAGTACAGCATTGAACAT CTTGCTCTTCTGCCCGGAGTAAATTAAGAACCCGTTTGGATCCAAACCAAATATCACTTATTGAAGTTTATCCAGTATTT TTTTCTAGTAGCTAAGCTTCAATAAGTCCTTATCCAAACGAGTACTAAATGCAAGTTGGATTCTTGATTCATCTATTCAC TAGAATATAAGCTGAAGCTGAGAAGTAGAATGGAATTTCCAAGTTGATTCATTTATAAAGAACATGACAACCCCTTTGGG CTCATTTTTAGAAGTTGTGACAGTGGCATCCTTTGATGGTGTTTAAAGTTACTGATGGGAAAACAGAACCTAGGAGAGTT CAGTGTTTAAAAAAAAAAATCTCATTGTCTTGCTTCCCACTTTGGGGTGCCATGTCCTATATACACCAATGCACTTGTTT GAAGTGCAAAGGCCTGCTTTTTGTTGAGTGATCATGATTGTCAATTACTCTGATATGGTGATAACTTTTTCTTTCTCTTT TAGGTATATCATTAGAAAAATTATTGGTCAGAAAGCATAAGACAATTTTACATTTTAACTAATGAACAAAAAAACTGGCT TACCAATGAATCATGGTTTTACTCTAACATTTAACATGTTAATTATAATATGTTTCTTATGTGCGAAAATTAATTTGCAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0044800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTGATCTCACTTGCTGCACCAACACTCCCTTGCGTCCCAAATCAATGGCGGCATCATCGGAGGCCCATACCCAAAC CTTGGAAATTTACCCGAAGAAAGTTTCTGGGGTTTCCCCCTTTTGGAGAGACAAGTATGAAAGAGAAGCCAAGAGGTATT GGGATGTCTTCTACAGACGCCACAAGGACAAATTTTTCAAAGATCGCCACTACTTGGATAAGGAATGGGGCGATCACTTT TCCGGAGGAAGAAAAGTGATTTTAGAGGCTGGTTGTGGAGCTGGAAATACTATCTTTCCTGTCATAGCTTCTTATCCGGA TGCTTTTGTTTATGCGTGTGATTTCTCGCCACGGGCTATCGACTTGGTTAAGGCGCATGAAGACTTCAAGGACTCCCATG TTCACGCTTTTGTCTCTGATTTGACAGCTGATGATCTGTGCAAGGAGATTCTTCCATCTTCTGTTGATATTGTTACAATG ATTTTTATGTTATCTGCAGTTTCCCCTGAAAAGATGCCTCTAGTTTTGCAAAATGTTAGAAAAATTATCAAGCCAAATGG ATATGTGCTGCTCCGAGACTATGCTACTGGTGACCTTGCTCAGGAAAGATTCTCTGGAAAGGATCAAAAGATCAGTGATA ACTTTTATGTTAGAGGTGATGGCACTCGTGCTTACTATTTTTCAAATGAGTTCTTGACAAAAATATTCAAAGAAAATGGT TTTAATGTTCACAAACTTGATGTGTGCTGCAAAGAAGTTGAGAATCGCTCAAGGGAGTTGATAATGAAACGGCGTTGGGT CCAAGCTGTATTTCGCGTTTCAGATGATTCCAACTCTTCTTCCAGTAAAGAAGCTCAGGCCAATCATCTTGGTAGTTATA GTATTGAAAAGGAAAGCAAGAAAAATAATTTAGATAGTAATTTAAATGACTCTGCCGTTGACTTGTCTGAGGGACTCGCA CTTGACATGTTTGGAGTCTTACCTTCTAGTGAGTATGAGATGATTGAGGTAAACCTTAGAGGCTGGAGTTTCAAGATTAG TTTACTCTCAAAAGAGTATCAACATACCTGCAAATCAACTGGTTTGATGCTGTGGGAATCAGCCCGATTGATGGCTTCTG TCCTTGCAGAAAATCCCAATATTGTAGCCGGAAAAAGGGTCTTGGAGTTGGGGTGCGGCAGCGGTGGAATCTGCTCTATG ATTGCGGCTAGATATGCTGATCTAGTGGTTGCTACTGATGGAGATGGTTTTGCTCTTGACCTGCTCACCAAAAATGTTGA ATCTAACATTGAGCCGCATTTGCTGACTAAACTAATTACAAAGAGACTGGAGTGGGGAAACGAGGACCACATAAAAAGCA TAAAGGAAGTGAATCATGGAGGGTTTGATGTCATCATGGGCACAGATGTCACGTACATTCCGGAAGCTATATTGCCCTTG TTTGCAACGACAAAAGAACTGATTGCTTCCAGCGGAATCAATAGAGATGACGGTAATGCTCCTGCACTAATTCTTTGCCA TATCTTTCGCCGTGTTGATGAACCGACCTTGCTTTCGGCCGCGGCACAATTTGGTTTCAGATTAGTAGACAAATGGCCTG CTGGAATTTCAACCAAGTTGTCTCAGAGCATTATCAATGATTGGTTTGTAGACAATGGTTTAAAGGATGATCTTCCTAGT ACAGCATTGAACATCTTGCTCTTCTGCCCGGAGTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0044800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLDLTCCTNTPLRPKSMAASSEAHTQTLEIYPKKVSGVSPFWRDKYEREAKRYWDVFYRRHKDKFFKDRHYLDKEWGDHF SGGRKVILEAGCGAGNTIFPVIASYPDAFVYACDFSPRAIDLVKAHEDFKDSHVHAFVSDLTADDLCKEILPSSVDIVTM IFMLSAVSPEKMPLVLQNVRKIIKPNGYVLLRDYATGDLAQERFSGKDQKISDNFYVRGDGTRAYYFSNEFLTKIFKENG FNVHKLDVCCKEVENRSRELIMKRRWVQAVFRVSDDSNSSSSKEAQANHLGSYSIEKESKKNNLDSNLNDSAVDLSEGLA LDMFGVLPSSEYEMIEVNLRGWSFKISLLSKEYQHTCKSTGLMLWESARLMASVLAENPNIVAGKRVLELGCGSGGICSM IAARYADLVVATDGDGFALDLLTKNVESNIEPHLLTKLITKRLEWGNEDHIKSIKEVNHGGFDVIMGTDVTYIPEAILPL FATTKELIASSGINRDDGNAPALILCHIFRRVDEPTLLSAAAQFGFRLVDKWPAGISTKLSQSIINDWFVDNGLKDDLPS TALNILLFCPE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22809:SF9
29 276 248 1.4E-113 –
PANTHER
PTHR22809
29 276 248 1.4E-113
IPR026113
SUPERFAMILY
SSF53335
39 271 233 6.04E-36
IPR029063
Gene3D
G3DSA:3.40.50.150
48 281 234 3.0E-26 –
CDD
cd02440
87 191 105 4.49943E-12 –
Pfam
PF08242
88 188 101 5.6E-15
IPR013217
Gene3D
G3DSA:3.40.50.150
326 543 218 9.3E-37 –
Pfam
PF10294
354 491 138 4.0E-14
IPR019410
SUPERFAMILY
SSF53335
361 492 132 6.78E-16
IPR029063
CDD
cd02440
386 493 108 2.91452E-5 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0044800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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