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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0047900 |
| Transcript ID | LotjaGi5g1v0047900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein plastid movement impaired 1-related 1; TAIR: AT5G26160.1 light-independent protochlorophyllide reductase subunit; Swiss-Prot: sp|Q7Y219|PMIR2_ARATH Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2; TrEMBL-Plants: tr|A0A0B2P9D0|A0A0B2P9D0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0047900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8031465..8035806) extracted from Lotus japonicus Gifu genome v1.2.
GAAAACTATATAGAATAAAATGAACATGTTCGTCATCGGCGGCGGGTGAAGGAAGCAAAAGCATAACAAGAGGTCAATCA AATCACTCCACGTCTCCACCTTAATTTCCTCGAAGAATAGTCACAGAACCCACCACAATTCACAAAGCTCTACCTACTAC CCTCTTGCAATTCCTCAATTTGGTCAGTAATTTCATTTCCAATTGCTACTTTTTGCTTTGTAGTTGTTACTCTCACCACA TTACACTCTTCTATGTTAACAATCATGTAAATTTTTTTGTAACTTGTTTTATGGAGTAGCACTTTGGTTTTCTCAAGATT CTTGCTTGCTTTATTTTGATCTGTTATATGATGAATAGTTATCCATCCCCTTTTAAATTCTCAAGCTTCCTTCTACTTTT TTGATTGCTGAGTTCATGATTTTAATTTTCCTGGTTTGTTAAACATGACAGATTTCTTGAATTGCTTGATCAATCAATGG TACTGGTGTAGTGTGATGGGCTGAACAAATTTGTTAGGTTTTCCCCAATTTATTGTTTCGATTTTCAATGTCAACAAGAT GATGAAACCCATGTTTGAGTCTGGAAACCAAGATGCTGATGATGGTAGTGGAGACACTAATGGGAATAATGGTGAGCAGC TGCTGCATGACATTGAAGAAATAAGCAAAGCTCTTTACTTGCACAATACCCCTTTTAAGGCTTCATTCTCCTCGGTCGAT AATCGATCTAAGTCTGCTGGAAAGACTCGTGTGTCGAAACGTCAAGTTGACTCTACCACGAGGTTTCGAAGAGAAGATCT GTTTCCCAGGGACAAGAAGTTTTTGTCTTCAGCATGGATCTGGAAGAAGCCCTTGAAGGCTTTGGCCCATGTTGGTCATC AAAAGTTTAATTGTTGCTTTAACCTTCATGTCCACTCAATTGAGGGGTTGCCGTTGAATTTCAATGGCATTAGCTTAAGT GTGAACTGGAAAAGGAAGAGCAGCATTTTACGGACGCGCCCGGCAAGGGTTCTCAAGGGAGCTGTCGAGTTCAACGAAAC TTTGACACATAGATGTTCTATTTATGGTGGCCGCACAGGGTCTGGTCACGCTCTCAAGTACGAGTCCCGGCGTTTCTTGA TTTATGCTTCCATTGTTGGGGCACCTGAACATGACCTCGGGGACCACCATGTTGATGTCACAAGGATTTTACCTCTGACT TTAGAAGAGTTATTGGGTGATAAAAGATCAGGGGCATGGAGCACTAATTTTAGGTTGGCAGGAAAGGCTTTAGGAGCTAG CTTAAATGTTAGTTTCAGTTATCAAGTGATGAATGATGAGTTGATCGGACTTGGTGGCAATAATCTGAATGATCATAACC TTAGTAACTTAAATGTTATGGGTTGTACTCCTAGCAATAGGGAAGTAAAGCTTTGGCAAGGTGGGAGTTTTCCACATGAT GTATATAATGGATCGGTCCTCCCTTCTCATTCCAATGGTGATATGTTACCCCATGAAGCATTGTTGAAATCTGGCTTTAG TATTTCCAAATCAATGACTATACTATATCAAAAACTTGATGAGGGGAACTTCCATACTTCAGAATCAGAAGACTCAGAAC ATTTGGAACCACTTAAATCCCAAATTCTTCTGAAACCAGACTCACCTCGAGAATCAAATCTAGACGACTCTGATGATACT GAATTTTCCATTACTGAACAAGGAATAGAAACACTAGAAGAGGATTCCTTGAAACTTGATCAGACAGGAGTTCAAACATT TGATATGTCAACAGTCGAAATCATTGATGTGGATGAGATTCTTAAGGATGATGACATATTTGATGAGAATAACACAAGCT TTGATTCAATGGATGCCATATGCAGTAGTTATGTGAATGGGGCCATAGCAGATGACAGCAAACATATATGCATGAAGATT GTGGATACAGTTCCTGAGACATCAGATTCTTTTGGCAAAGAACACTACTTGAGTATTAAATCAAATTATAAATCACATAA AATGGCAAAAAAATCACATAGCTTGGATGATATCATTGAATCCGTTGCGGGTGATTTCCTAAACATGCTGGCCATGGAGA ATGGTTCATTCGGCTCAGGTTGTGGTGGTGATCCCCAGTCTCCCAGAGAGCAGCTTTTGAGACAGTTTGAACAAGAAGCA CTAGCTTCAGGTGATTTTACTTTTGACTTTGATGCCAATGGGGAGGAATTGGGGACAGATACACTTGAAGATGGCTTCGG GTATAGTGCCGAGGATTCTGATTTGTCTTCAATTATTCAAGCTGCTGAAGAGGAGTATGCAACAGAGCACCAGTCAATAA TGCAGAGAAGGAAGGCCAAACTTCTTGAAGATTTGGAGACTGACTCATTGATGCAACAATGGGGTTTAAATGAGAGGGAC TTTGAAAATTCTCCGCGAACTTGGTCTGGTGGGTTTGGAAGCCCAATTGAACTGTGTGACAATGAACCATCCATGCTGCC TTCAATTGGACAAGGACTTGGTTCATTTGTTCAAACTAGGGGTGGAGGATTTTTGAGGTCCATGCGCCCTTCCCTCTTCG TGAATGCTAAAAATTGCGGAAACCTCATCATTCAGGCTTCTAATCCAGTTGTTCTACCTGCGAAAATGGGTAACGACATA TTGGAGATACTGCTGCATGTGGCATCTTCTGGAGTTGAAGATCTGTGTGATCATATCTATAAATTAATGCCTTTGAAAGA TATCACTGGAAAATCCATCAAGCATATTTTGCGGGATCATAGAACCCCCAAGGGGGCTCTTCAGAGGTTAGTGTGGCATT ACTTGTGAATGATTGTGTTTCCATTTTTCTCATGTCATTTTTTTCCTTTTTTACTTAAGTATTTGAGTTTTTTCTTTTTC TGATTTGCTTTTTTAATTCTGTTTCAGACAGGGATCATGGGAAGATTTGTTTGAAGAATGTCCACAAGGTTATTTAACAG ACGAAAGCATGGGTTTGGATTTTGTGCCTCTAGAAGCTATAGCTCCTATGACTATTGATAAGATTGAAGCCCTTTTGATA GAAGGGTTGAGAACACAGTATGACATGTCGAACGAGCAGGCACCATCATACATCCATTCGCAACATACAAACACGCCTGA CTTTGGAGACATAAGAGCCAACATGAGAAGGTATCCCACATTAGAAAAAGTTACTAAATTGCAGTTAGAAGATAGTGGTG AAATTTACAATGATGTTGATGGATTGATGGGTCTGTCACTAACATTGGACCAGTGGTTGAGGTTAGATTCTGGCATTATC GATGCAGATCAGAATTTGGGGAAAATGTTGAAGATCCTTAAAGCACACCATTGTAAAATCCCAGAAATAGATGATGACAG GTTGAAAAATGCAGTGGACGAGGTAAAAACGTGCGGCGAAAAGCACGGACTCCTGGGGAATCACATAACAGTGGCTTTTA TGATCCAGCTTAGAGATCCACTGCGAAATTATGAACCGGTTGGCGTTCCAATGCTGGTTTTAACTCATGTGGAAAGAGCT GACACACATGCTATGCAGCAAGACCACAGCAACTTTCTTGCGAGACAGGAAAAGGGAATGGAGGATGACGAAACCTCTCG GTTCGGATTTAGAATCAAGGAGATTGATCTTGCAGGAATCATTACCAAAGCTGGAAAGACGCACCTTTGGGGTACAGCGG CTCAGCAGCAATCTGGGTACCGTTGGTTGCTTGCGAGTGGCGTGGGGAGTACTGTCAAACATGCATCTTCAAAATTGAAG GCAATTGTTAGATCTTCTCCATTGATTACCAAGAAGCTGCTGAATCAGGATGTACTTTGGAGCATTTCTTATGTTGATAA CAACATGAGGACTAATGGTAAAGAGTTGGCAGCTGAAAATGTACACATTCGGAACCCTGATGTCCTCTTTCCAAGTTGAA CTATATCAAATCATTTTACAATTCTGTTTTAACCAATTTCATAAATTTCTCCATGTAGATAGTTATACGGGTACATCCAC CAAGTGTTAAGTCTATAAGAGTCAGTTAGCTCAATTTTTTTTTTTGTTATTAATCATATTGAATCTTCTGGCTTCCTGGG AAATGACCCTTTTTTCTTTCAATATCCCTTTCTGTTTTTGGAGATGTACATACATGCACTCAAATTTAAGGAATAGAGTA GAGTTATCTGGTATGTTTTATGTTATTATCTACTGTATAGATTCTTGCAGTATTGTTTGCTCTGAAATGCAAATGAAAAC CTGCTTGGAATTAATAAAATGTTATCAGTATAGGAATAAACCAGAACAATATATGCGATGGGATACAAAGAGAAGAGAGA TAAATTAAAAATGTGATGATAG
CDS sequence (LotjaGi5g1v0047900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAACCCATGTTTGAGTCTGGAAACCAAGATGCTGATGATGGTAGTGGAGACACTAATGGGAATAATGGTGAGCA GCTGCTGCATGACATTGAAGAAATAAGCAAAGCTCTTTACTTGCACAATACCCCTTTTAAGGCTTCATTCTCCTCGGTCG ATAATCGATCTAAGTCTGCTGGAAAGACTCGTGTGTCGAAACGTCAAGTTGACTCTACCACGAGGTTTCGAAGAGAAGAT CTGTTTCCCAGGGACAAGAAGTTTTTGTCTTCAGCATGGATCTGGAAGAAGCCCTTGAAGGCTTTGGCCCATGTTGGTCA TCAAAAGTTTAATTGTTGCTTTAACCTTCATGTCCACTCAATTGAGGGGTTGCCGTTGAATTTCAATGGCATTAGCTTAA GTGTGAACTGGAAAAGGAAGAGCAGCATTTTACGGACGCGCCCGGCAAGGGTTCTCAAGGGAGCTGTCGAGTTCAACGAA ACTTTGACACATAGATGTTCTATTTATGGTGGCCGCACAGGGTCTGGTCACGCTCTCAAGTACGAGTCCCGGCGTTTCTT GATTTATGCTTCCATTGTTGGGGCACCTGAACATGACCTCGGGGACCACCATGTTGATGTCACAAGGATTTTACCTCTGA CTTTAGAAGAGTTATTGGGTGATAAAAGATCAGGGGCATGGAGCACTAATTTTAGGTTGGCAGGAAAGGCTTTAGGAGCT AGCTTAAATGTTAGTTTCAGTTATCAAGTGATGAATGATGAGTTGATCGGACTTGGTGGCAATAATCTGAATGATCATAA CCTTAGTAACTTAAATGTTATGGGTTGTACTCCTAGCAATAGGGAAGTAAAGCTTTGGCAAGGTGGGAGTTTTCCACATG ATGTATATAATGGATCGGTCCTCCCTTCTCATTCCAATGGTGATATGTTACCCCATGAAGCATTGTTGAAATCTGGCTTT AGTATTTCCAAATCAATGACTATACTATATCAAAAACTTGATGAGGGGAACTTCCATACTTCAGAATCAGAAGACTCAGA ACATTTGGAACCACTTAAATCCCAAATTCTTCTGAAACCAGACTCACCTCGAGAATCAAATCTAGACGACTCTGATGATA CTGAATTTTCCATTACTGAACAAGGAATAGAAACACTAGAAGAGGATTCCTTGAAACTTGATCAGACAGGAGTTCAAACA TTTGATATGTCAACAGTCGAAATCATTGATGTGGATGAGATTCTTAAGGATGATGACATATTTGATGAGAATAACACAAG CTTTGATTCAATGGATGCCATATGCAGTAGTTATGTGAATGGGGCCATAGCAGATGACAGCAAACATATATGCATGAAGA TTGTGGATACAGTTCCTGAGACATCAGATTCTTTTGGCAAAGAACACTACTTGAGTATTAAATCAAATTATAAATCACAT AAAATGGCAAAAAAATCACATAGCTTGGATGATATCATTGAATCCGTTGCGGGTGATTTCCTAAACATGCTGGCCATGGA GAATGGTTCATTCGGCTCAGGTTGTGGTGGTGATCCCCAGTCTCCCAGAGAGCAGCTTTTGAGACAGTTTGAACAAGAAG CACTAGCTTCAGGTGATTTTACTTTTGACTTTGATGCCAATGGGGAGGAATTGGGGACAGATACACTTGAAGATGGCTTC GGGTATAGTGCCGAGGATTCTGATTTGTCTTCAATTATTCAAGCTGCTGAAGAGGAGTATGCAACAGAGCACCAGTCAAT AATGCAGAGAAGGAAGGCCAAACTTCTTGAAGATTTGGAGACTGACTCATTGATGCAACAATGGGGTTTAAATGAGAGGG ACTTTGAAAATTCTCCGCGAACTTGGTCTGGTGGGTTTGGAAGCCCAATTGAACTGTGTGACAATGAACCATCCATGCTG CCTTCAATTGGACAAGGACTTGGTTCATTTGTTCAAACTAGGGGTGGAGGATTTTTGAGGTCCATGCGCCCTTCCCTCTT CGTGAATGCTAAAAATTGCGGAAACCTCATCATTCAGGCTTCTAATCCAGTTGTTCTACCTGCGAAAATGGGTAACGACA TATTGGAGATACTGCTGCATGTGGCATCTTCTGGAGTTGAAGATCTGTGTGATCATATCTATAAATTAATGCCTTTGAAA GATATCACTGGAAAATCCATCAAGCATATTTTGCGGGATCATAGAACCCCCAAGGGGGCTCTTCAGAGACAGGGATCATG GGAAGATTTGTTTGAAGAATGTCCACAAGGTTATTTAACAGACGAAAGCATGGGTTTGGATTTTGTGCCTCTAGAAGCTA TAGCTCCTATGACTATTGATAAGATTGAAGCCCTTTTGATAGAAGGGTTGAGAACACAGTATGACATGTCGAACGAGCAG GCACCATCATACATCCATTCGCAACATACAAACACGCCTGACTTTGGAGACATAAGAGCCAACATGAGAAGGTATCCCAC ATTAGAAAAAGTTACTAAATTGCAGTTAGAAGATAGTGGTGAAATTTACAATGATGTTGATGGATTGATGGGTCTGTCAC TAACATTGGACCAGTGGTTGAGGTTAGATTCTGGCATTATCGATGCAGATCAGAATTTGGGGAAAATGTTGAAGATCCTT AAAGCACACCATTGTAAAATCCCAGAAATAGATGATGACAGGTTGAAAAATGCAGTGGACGAGGTAAAAACGTGCGGCGA AAAGCACGGACTCCTGGGGAATCACATAACAGTGGCTTTTATGATCCAGCTTAGAGATCCACTGCGAAATTATGAACCGG TTGGCGTTCCAATGCTGGTTTTAACTCATGTGGAAAGAGCTGACACACATGCTATGCAGCAAGACCACAGCAACTTTCTT GCGAGACAGGAAAAGGGAATGGAGGATGACGAAACCTCTCGGTTCGGATTTAGAATCAAGGAGATTGATCTTGCAGGAAT CATTACCAAAGCTGGAAAGACGCACCTTTGGGGTACAGCGGCTCAGCAGCAATCTGGGTACCGTTGGTTGCTTGCGAGTG GCGTGGGGAGTACTGTCAAACATGCATCTTCAAAATTGAAGGCAATTGTTAGATCTTCTCCATTGATTACCAAGAAGCTG CTGAATCAGGATGTACTTTGGAGCATTTCTTATGTTGATAACAACATGAGGACTAATGGTAAAGAGTTGGCAGCTGAAAA TGTACACATTCGGAACCCTGATGTCCTCTTTCCAAGTTGA
Protein sequence (LotjaGi5g1v0047900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKPMFESGNQDADDGSGDTNGNNGEQLLHDIEEISKALYLHNTPFKASFSSVDNRSKSAGKTRVSKRQVDSTTRFRRED LFPRDKKFLSSAWIWKKPLKALAHVGHQKFNCCFNLHVHSIEGLPLNFNGISLSVNWKRKSSILRTRPARVLKGAVEFNE TLTHRCSIYGGRTGSGHALKYESRRFLIYASIVGAPEHDLGDHHVDVTRILPLTLEELLGDKRSGAWSTNFRLAGKALGA SLNVSFSYQVMNDELIGLGGNNLNDHNLSNLNVMGCTPSNREVKLWQGGSFPHDVYNGSVLPSHSNGDMLPHEALLKSGF SISKSMTILYQKLDEGNFHTSESEDSEHLEPLKSQILLKPDSPRESNLDDSDDTEFSITEQGIETLEEDSLKLDQTGVQT FDMSTVEIIDVDEILKDDDIFDENNTSFDSMDAICSSYVNGAIADDSKHICMKIVDTVPETSDSFGKEHYLSIKSNYKSH KMAKKSHSLDDIIESVAGDFLNMLAMENGSFGSGCGGDPQSPREQLLRQFEQEALASGDFTFDFDANGEELGTDTLEDGF GYSAEDSDLSSIIQAAEEEYATEHQSIMQRRKAKLLEDLETDSLMQQWGLNERDFENSPRTWSGGFGSPIELCDNEPSML PSIGQGLGSFVQTRGGGFLRSMRPSLFVNAKNCGNLIIQASNPVVLPAKMGNDILEILLHVASSGVEDLCDHIYKLMPLK DITGKSIKHILRDHRTPKGALQRQGSWEDLFEECPQGYLTDESMGLDFVPLEAIAPMTIDKIEALLIEGLRTQYDMSNEQ APSYIHSQHTNTPDFGDIRANMRRYPTLEKVTKLQLEDSGEIYNDVDGLMGLSLTLDQWLRLDSGIIDADQNLGKMLKIL KAHHCKIPEIDDDRLKNAVDEVKTCGEKHGLLGNHITVAFMIQLRDPLRNYEPVGVPMLVLTHVERADTHAMQQDHSNFL ARQEKGMEDDETSRFGFRIKEIDLAGIITKAGKTHLWGTAAQQQSGYRWLLASGVGSTVKHASSKLKAIVRSSPLITKKL LNQDVLWSISYVDNNMRTNGKELAAENVHIRNPDVLFPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 1 | 1079 | 1079 | 0.0 | ||
| PANTHER | 1 | 1079 | 1079 | 0.0 | ||
| MobiDBLite | 13 | 27 | 15 | - | – | |
| MobiDBLite | 50 | 70 | 21 | - | – | |
| ProSiteProfiles | 102 | 250 | 149 | 20.371 | ||
| Pfam | 107 | 253 | 147 | 3.9E-13 | ||
| MobiDBLite | 339 | 354 | 16 | - | – | |
| MobiDBLite | 339 | 375 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0047900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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