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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0050400 |
| Transcript ID | LotjaGi5g1v0050400.7 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2c, putative; TAIR: AT4G31750.1 HOPW1-1-interacting 2; Swiss-Prot: sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59; TrEMBL-Plants: tr|I3SZ64|I3SZ64_MEDTR Uncharacterized protein; Found in the gene: LotjaGi5g1v0050400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8497306..8502177) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTTACCTCAACTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCT CAGGTTAATATCCATCTTTTTATAGATCTAGAATTGTGTTTAATGGTTGCAGTTTTTGTTGTTGGTTAATGTCATTAATA CTTTGTAGTTTTGTGTTGATTTAGCTAGACTTCCTTTATATCTTGTGTCTTCAGGTCAATTGAATGAGATGTTTTGACAT GGTTTATTATGGTTTGTTTTACAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCCTCAA TGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGAGGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTATATTA TATTTACACAATTCTCTTATATCCATGCTGCATATTTAAGAAGATTCTAACATGAGGAACTGGTTGTAGTCATACATTGA TTGGACACATGATGAACTATTGCCCACAGTAACGATAAAAATGATGATCTCTTTCTTTATTTTGTTTCTATCCATGGATT TCCCTTTTTAAGTTACCAGGAAATTAATTATTCCATTTGACTTAGTAGTGCCATATTGTTGAGAGGTCTCACATTGACTA GAAATATGACCAAAATAGTCCTTATCAAGGGTAGAGCAACCCTCACCCCTAAGCTAACTTTTGGGGGTAGAGTTATGCCT AACCTGAATTCTAAGATGATGATATCAGAGCCTATCCGAAATCTCTTTATTGGAGACTACCCATATATGGGCAACCACAG ATGTCCAATCCTGCAAAATTTATGCTCCAAATGTCCATCCCTAGGCGTGAGAGGGTGTGTTGAGAAGTCTCACATCGACT AAAGATATGGCCAAAATAGTCCCTGTAAAGGGTAGAATAGCCCTCACCTTTAAGCTATAGCTTTGGGGTAGAGTTAAGCC TAACCCGAATTCTAAGACAGATGAAGATGCTTGACAATGACATGGACTCATGCATAATGAGGAAGGTCTAGATTTGTTAC ATTTATGGTCTCATCCTGATCCCCATGTCAGCATATCTGATTTTGGATTGTTTGATTTTTCTGATTCTCTATTGTACTGT TTCCTGAACACAATAAAGGAAATCTCTCTGGAGGTTAATCATCTAAGTAATATGTCTCAGTATTAATTTGATAGGCTTCT CCATTGTCTGGTACTTTCTCTTTCTAGTATTTCTCGTTGTGTTGACGATTTTTCAATAATTCCTTATAAGAGCAATTATG AGTTGCAGACTGTTTATTAATATGGCATCACAGAGTATTACTTTTTTGCTATTGAAGCATGTAGGAAATATTGATTTTCC ATATATAACCTATGCTTGATACTATTCTTGTTTAAAACTTTCAGGTCACGGTGGTGCTCGTGCTGCTGAGTATGTCAAGC AAAACCTATTTAGTAATTTGATCAGTCACCCAAAGTTTATTTCTGACACCAAATCTGCAATAGGTATGTAGTTTCCTGCA TATAGCAGCATGACCTTTTTAGCCTGATGTTCTCGAATTTGTTTAATCTTGAGAATAACCCTGCTCCTACCCAACTTCTT TTTCCCACAGCTGATGCGTATAACCATACGGACTCTGAATTTCTGAAGTCAGAAAATAATCAAAACAGAGATGCTGGATC AACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGAGCTGTTATATGCAGGG GCGGAAATGGTAAGGCTAGTAGCTTCATATTCTTGTATTGTAAACAATGTTGTTAGGATCGGGATCTTACTTAGGATTGG GAGGGGGATGAAAGATCTTAATCGGAGGATCGTAGATTAGATCATAAGATCTCTTCTAGAAATACAAAATTATAGAACAT ATATATGCATAGAAAATCAAACAAATAAGGTAAACAACCTCTATATCACATCAATAAAGTAAACTTTTAAACTGAAAATT TATTAGCATGAGATCACATAAGTCATAATATAACTTTTGCATAAGAAACATAAGTTCATAACGTAGAACTTATACTGAAA AACCCAAAAGAACATAATCTAATTGTCCAATTCCACTACGCTACTACTCTAGAACTATTTTTTCTTCAATGGAAACAGCA CTAGCAGAGACAAGAACAAATCAGCTCTGTAGGCAGAGGAAAACAGTAGCACTGCATGTGCAGGGTGAAGAATACAGAGG GTCCAAACTTCAAATTTAGAAGTTGGCTCGTAGAATAGAAAGCTTTGACTTTTCCTTATGAAGAAGAATATTGTGGTGAA AGAGGGATGAGGAGGATCACGATTATCATTCGTTGTGTTAGGTTTTAGTTTTTGGTTGTGGGGTTCGAATTGCGATTTGT AATGGGTGAAAGAGTGGCAAAATCGGACTGTAAAGCAGGTCTCCCGATTCATGATCCGGAAGCCTAGCAAGAGTGGTAAT CGGATTGGATCTAGGATACTACGATCTTACATGAAAGATCACGGTCCTGCTTGCAGTCCTACCTATTCATAATTGCCATC TTGATCGGAGAGCTCTACTTGGATCGCAAGATCGTGCAATCTCACATTCAAAATTGCGATCTTGACAGCATTGATTGTAA ATACATTCTTGGTTGTAGTGTATTACATATATTATTTCACATGATTGTAATTTTCTGATTGCTCAGGAGGTCATAATAAT TGTGGTTGTTAAATGTATCTGGAAAATTTTATGATGCCAGCCCCATGCTTTTTTCTTGGTTCCTGCTGTTGTTTTATGTA GACTAGTGTCATCTCTATTGTGGCTAGAGTCTATTGAAGTTCCTAATATTTGTATTGTGAAAACAAGTTTAAAGGCAGTA ACTGTCTTGTGTTTGTCAACTCTGTCGTAATTTTTACAATTGTTTGTCCACTTCTCTCCTTTGATTTTTTTTTTCTTTCC TTCTAACTCTATGTTGAAAGTCTATCTTGGTATAATTCACAGTTAAAATGTTAAGGATTTTCATTTGGTAATAAAAGGGT ATGGGGTTGATGCTTTGGTTTATGGCAATTTATTTTGCATCTGTTGAGAAAATCAATCCAGCCGTCTGATATGAATGATT ACTTAACTAATTTAATTTTGTATTTCTGTTTCCTATATAGCCATTGCCGTCTCTCGAGATCACAAACCAGATCAAACTGA TGAGAGGCAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGTGAGTTCATTGAGTAGTTAGCTCTTGTAATTT GATTTCTAGATTGATTTTGTTTATCTCTATGAAATACTTAGTCTTAAACATTACATTTATAGGAACTTGGAGAGTTGGTG GTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGTTTGT TTCTCATATGGTGACATGCACTCTTGGATTTTTTTTCAAATATTATTCGCTTCATTTTAATTTGTCTCTGCTGTATAGGA CGCATGATCTAATATATGGTTTATAATGAACAACATCATGTCAATAAATTGAAGAAAATTCTGCCACAAATGACAAGATG AAAAATAATATCACGCTTTTAACATGCTTAACTATCCTAAAACATAAACACAGTTCAGAAAGAACTTCATACATATAGGC TTTTCATTGGAACTACTAATCCCCAGAATTTCTTATTTCAAGATAAAAATTGACCGATTTGCATGAAGGGTATAGCCATG CATCGGGTTGTAATAGTTACTTGAAATATAATATGAAAATATTCATGTGTCTTCACCTAATTGCTTAAGCTTTTGGGATA GTTGGTTCATGACATGGTTTTAGAGCATCTATGACCAAGTGGGTTTGTACATGGCCCGCGATTCATGTTGAGGGATACTT GCATAGTTGGTTCATGATAATAATATACATATTTGTCTATGGCATACTTAAATAATTGAAATTCCTAGAACTTGTGAAGG TGAAAAAGTACATTGTAGTGATAGATATACTTATTCTGCAATTAGCCTTAAACAGTAGCTTTCTTGAGCTTCTTGAAGAA AAATGCTTCTAACCATATGAATTATTTTGTGATGTAACTGGTCTCTACACAAAAGACATTCCTCCTGATTGGTCGTTATT CTTGTTCAACTGGCTTTAGGTCTTTTTTTGGCATCCTTTTTCCTTTGTATATTTTAGTTTTAAAATGGTTGTGGTCTTGC AGGAAGAAAAAGTGGACGGATCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGTT TGCAATGATTTTCGCTTCTTCCACTTTCTGTTGTCAGTGGTTGAAGTATTTAATGATTTCTTTATTCAAAGTTATTCTCT AGTAAAACCACCTTACATGATTTCCTATACAAATATTTGAAAGGACAAAATGAAGTGAAAATAAGGTAGCTTTTTGCAAT TATTGGTCAAAAAATTGAAATAGGAAGATAGAGTATTAATCAAAACCCATGAGTTGTATCTTAATAAATATGTAGCTCAC CAAATTTAGAAAGCCAAACTCTGAAGTATTCGTCCATGCTTGAAAACTTTCTACAATTGATTATAAAGCCAGCAATTCTG GGTAGATGTTCGTTGAGTAGCTTATGGGTTACAGAATTGTGTTGCCTAACTCAATTTTTTCATCTTTCTCCAGGAAGCTG TGGCTATGATTAAACCAATTGAGGATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCT GACAACATTACTTGTGTTGTTGTTCGCTTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAA
CDS sequence (LotjaGi5g1v0050400.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTACCTCAACTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCT CAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCCTCAATGGAAGATTTTTATGAGACAA GAATTGATGGTGTTGAGGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGCCATTGCCGTCTCTCGAGATCACAAACCA GATCAAACTGATGAGAGGCAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGT TCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAG TGGACGGATCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTGGCTATG ATTAAACCAATTGAGGATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCTGACAACAT TACTTGTGTTGTTGTTCGCTTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAA
Protein sequence (LotjaGi5g1v0050400.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEVVGLFGVFDAIAVSRDHKP DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDGSLEFLILASDGLWDVVSNEEAVAM IKPIEDAEEAAKRLMQEAYQRGSSDNITCVVVRFVVNQGASSRSTSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 194 | 194 | 31.582 | ||
| PANTHER | 1 | 70 | 70 | 1.7E-107 | – | |
| PANTHER | 1 | 70 | 70 | 1.7E-107 | ||
| SMART | 24 | 192 | 169 | 1.2E-33 | ||
| Gene3D | 70 | 206 | 137 | 2.8E-51 | ||
| CDD | 70 | 194 | 125 | 2.67054E-53 | ||
| PANTHER | 71 | 197 | 127 | 1.7E-107 | ||
| PANTHER | 71 | 197 | 127 | 1.7E-107 | – | |
| Pfam | 72 | 187 | 116 | 5.7E-41 | ||
| SUPERFAMILY | 72 | 194 | 123 | 1.23E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. |
Expression pattern of LotjaGi5g1v0050400.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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