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LotjaGi5g1v0050400.8

Overview

Field Value
Gene ID LotjaGi5g1v0050400
Transcript ID LotjaGi5g1v0050400.8
Related isoforms 8
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G31750.1 HOPW1-1-interacting 2; Swiss-Prot: sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59; TrEMBL-Plants: tr|I1MX28|I1MX28_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0050400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:8497306..8502177) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGTTACCTCAACTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCT CAGGTTAATATCCATCTTTTTATAGATCTAGAATTGTGTTTAATGGTTGCAGTTTTTGTTGTTGGTTAATGTCATTAATA CTTTGTAGTTTTGTGTTGATTTAGCTAGACTTCCTTTATATCTTGTGTCTTCAGGTCAATTGAATGAGATGTTTTGACAT GGTTTATTATGGTTTGTTTTACAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCCTCAA TGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGAGGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTATATTA TATTTACACAATTCTCTTATATCCATGCTGCATATTTAAGAAGATTCTAACATGAGGAACTGGTTGTAGTCATACATTGA TTGGACACATGATGAACTATTGCCCACAGTAACGATAAAAATGATGATCTCTTTCTTTATTTTGTTTCTATCCATGGATT TCCCTTTTTAAGTTACCAGGAAATTAATTATTCCATTTGACTTAGTAGTGCCATATTGTTGAGAGGTCTCACATTGACTA GAAATATGACCAAAATAGTCCTTATCAAGGGTAGAGCAACCCTCACCCCTAAGCTAACTTTTGGGGGTAGAGTTATGCCT AACCTGAATTCTAAGATGATGATATCAGAGCCTATCCGAAATCTCTTTATTGGAGACTACCCATATATGGGCAACCACAG ATGTCCAATCCTGCAAAATTTATGCTCCAAATGTCCATCCCTAGGCGTGAGAGGGTGTGTTGAGAAGTCTCACATCGACT AAAGATATGGCCAAAATAGTCCCTGTAAAGGGTAGAATAGCCCTCACCTTTAAGCTATAGCTTTGGGGTAGAGTTAAGCC TAACCCGAATTCTAAGACAGATGAAGATGCTTGACAATGACATGGACTCATGCATAATGAGGAAGGTCTAGATTTGTTAC ATTTATGGTCTCATCCTGATCCCCATGTCAGCATATCTGATTTTGGATTGTTTGATTTTTCTGATTCTCTATTGTACTGT TTCCTGAACACAATAAAGGAAATCTCTCTGGAGGTTAATCATCTAAGTAATATGTCTCAGTATTAATTTGATAGGCTTCT CCATTGTCTGGTACTTTCTCTTTCTAGTATTTCTCGTTGTGTTGACGATTTTTCAATAATTCCTTATAAGAGCAATTATG AGTTGCAGACTGTTTATTAATATGGCATCACAGAGTATTACTTTTTTGCTATTGAAGCATGTAGGAAATATTGATTTTCC ATATATAACCTATGCTTGATACTATTCTTGTTTAAAACTTTCAGGTCACGGTGGTGCTCGTGCTGCTGAGTATGTCAAGC AAAACCTATTTAGTAATTTGATCAGTCACCCAAAGTTTATTTCTGACACCAAATCTGCAATAGGTATGTAGTTTCCTGCA TATAGCAGCATGACCTTTTTAGCCTGATGTTCTCGAATTTGTTTAATCTTGAGAATAACCCTGCTCCTACCCAACTTCTT TTTCCCACAGCTGATGCGTATAACCATACGGACTCTGAATTTCTGAAGTCAGAAAATAATCAAAACAGAGATGCTGGATC AACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGAGCTGTTATATGCAGGG GCGGAAATGGTAAGGCTAGTAGCTTCATATTCTTGTATTGTAAACAATGTTGTTAGGATCGGGATCTTACTTAGGATTGG GAGGGGGATGAAAGATCTTAATCGGAGGATCGTAGATTAGATCATAAGATCTCTTCTAGAAATACAAAATTATAGAACAT ATATATGCATAGAAAATCAAACAAATAAGGTAAACAACCTCTATATCACATCAATAAAGTAAACTTTTAAACTGAAAATT TATTAGCATGAGATCACATAAGTCATAATATAACTTTTGCATAAGAAACATAAGTTCATAACGTAGAACTTATACTGAAA AACCCAAAAGAACATAATCTAATTGTCCAATTCCACTACGCTACTACTCTAGAACTATTTTTTCTTCAATGGAAACAGCA CTAGCAGAGACAAGAACAAATCAGCTCTGTAGGCAGAGGAAAACAGTAGCACTGCATGTGCAGGGTGAAGAATACAGAGG GTCCAAACTTCAAATTTAGAAGTTGGCTCGTAGAATAGAAAGCTTTGACTTTTCCTTATGAAGAAGAATATTGTGGTGAA AGAGGGATGAGGAGGATCACGATTATCATTCGTTGTGTTAGGTTTTAGTTTTTGGTTGTGGGGTTCGAATTGCGATTTGT AATGGGTGAAAGAGTGGCAAAATCGGACTGTAAAGCAGGTCTCCCGATTCATGATCCGGAAGCCTAGCAAGAGTGGTAAT CGGATTGGATCTAGGATACTACGATCTTACATGAAAGATCACGGTCCTGCTTGCAGTCCTACCTATTCATAATTGCCATC TTGATCGGAGAGCTCTACTTGGATCGCAAGATCGTGCAATCTCACATTCAAAATTGCGATCTTGACAGCATTGATTGTAA ATACATTCTTGGTTGTAGTGTATTACATATATTATTTCACATGATTGTAATTTTCTGATTGCTCAGGAGGTCATAATAAT TGTGGTTGTTAAATGTATCTGGAAAATTTTATGATGCCAGCCCCATGCTTTTTTCTTGGTTCCTGCTGTTGTTTTATGTA GACTAGTGTCATCTCTATTGTGGCTAGAGTCTATTGAAGTTCCTAATATTTGTATTGTGAAAACAAGTTTAAAGGCAGTA ACTGTCTTGTGTTTGTCAACTCTGTCGTAATTTTTACAATTGTTTGTCCACTTCTCTCCTTTGATTTTTTTTTTCTTTCC TTCTAACTCTATGTTGAAAGTCTATCTTGGTATAATTCACAGTTAAAATGTTAAGGATTTTCATTTGGTAATAAAAGGGT ATGGGGTTGATGCTTTGGTTTATGGCAATTTATTTTGCATCTGTTGAGAAAATCAATCCAGCCGTCTGATATGAATGATT ACTTAACTAATTTAATTTTGTATTTCTGTTTCCTATATAGCCATTGCCGTCTCTCGAGATCACAAACCAGATCAAACTGA TGAGAGGCAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGTGAGTTCATTGAGTAGTTAGCTCTTGTAATTT GATTTCTAGATTGATTTTGTTTATCTCTATGAAATACTTAGTCTTAAACATTACATTTATAGGAACTTGGAGAGTTGGTG GTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGTTTGT TTCTCATATGGTGACATGCACTCTTGGATTTTTTTTCAAATATTATTCGCTTCATTTTAATTTGTCTCTGCTGTATAGGA CGCATGATCTAATATATGGTTTATAATGAACAACATCATGTCAATAAATTGAAGAAAATTCTGCCACAAATGACAAGATG AAAAATAATATCACGCTTTTAACATGCTTAACTATCCTAAAACATAAACACAGTTCAGAAAGAACTTCATACATATAGGC TTTTCATTGGAACTACTAATCCCCAGAATTTCTTATTTCAAGATAAAAATTGACCGATTTGCATGAAGGGTATAGCCATG CATCGGGTTGTAATAGTTACTTGAAATATAATATGAAAATATTCATGTGTCTTCACCTAATTGCTTAAGCTTTTGGGATA GTTGGTTCATGACATGGTTTTAGAGCATCTATGACCAAGTGGGTTTGTACATGGCCCGCGATTCATGTTGAGGGATACTT GCATAGTTGGTTCATGATAATAATATACATATTTGTCTATGGCATACTTAAATAATTGAAATTCCTAGAACTTGTGAAGG TGAAAAAGTACATTGTAGTGATAGATATACTTATTCTGCAATTAGCCTTAAACAGTAGCTTTCTTGAGCTTCTTGAAGAA AAATGCTTCTAACCATATGAATTATTTTGTGATGTAACTGGTCTCTACACAAAAGACATTCCTCCTGATTGGTCGTTATT CTTGTTCAACTGGCTTTAGGTCTTTTTTTGGCATCCTTTTTCCTTTGTATATTTTAGTTTTAAAATGGTTGTGGTCTTGC AGGAAGAAAAAGTGGACGGATCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGTT TGCAATGATTTTCGCTTCTTCCACTTTCTGTTGTCAGTGGTTGAAGTATTTAATGATTTCTTTATTCAAAGTTATTCTCT AGTAAAACCACCTTACATGATTTCCTATACAAATATTTGAAAGGACAAAATGAAGTGAAAATAAGGTAGCTTTTTGCAAT TATTGGTCAAAAAATTGAAATAGGAAGATAGAGTATTAATCAAAACCCATGAGTTGTATCTTAATAAATATGTAGCTCAC CAAATTTAGAAAGCCAAACTCTGAAGTATTCGTCCATGCTTGAAAACTTTCTACAATTGATTATAAAGCCAGCAATTCTG GGTAGATGTTCGTTGAGTAGCTTATGGGTTACAGAATTGTGTTGCCTAACTCAATTTTTTCATCTTTCTCCAGGAAGCTG TGGCTATGATTAAACCAATTGAGGATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCT GACAACATTACTTGTGTTGTTGTTCGCTTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0050400.8) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTACCTCAACTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCT CAGTCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCCTCAATGGAAGATTTTTATGAGACAA GAATTGATGGTGTTGAGGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGCTGATGCGTATAACCATACGGACTCTGAA TTTCTGAAGTCAGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCT TGTTGCAAATGTTGGAGACTCCAGAGCTGTTATATGCAGGGGCGGAAATGCCATTGCCGTCTCTCGAGATCACAAACCAG ATCAAACTGATGAGAGGCAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTT CTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGT GGACGGATCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTGGCTATGA TTAAACCAATTGAGGATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCTGACAACATT ACTTGTGTTGTTGTTCGCTTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0050400.8) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEVVGLFGVFDADAYNHTDSE FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGV LAVSRAFGDRLLKQYVVADPEIQEEKVDGSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYQRGSSDNI TCVVVRFVVNQGASSRSTSS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF686
1 70 70 6.5E-143 –
MobiDBLite
mobidb-lite
1 25 25 - –
PANTHER
PTHR13832
1 70 70 6.5E-143
IPR015655
SMART
SM00332
24 245 222 2.0E-70
IPR001932
Gene3D
G3DSA:3.60.40.10
27 252 226 1.0E-70
IPR036457
SUPERFAMILY
SSF81606
28 247 220 1.83E-66
IPR036457
CDD
cd00143
33 247 215 1.46972E-78
IPR001932
ProSiteProfiles
PS51746
34 247 214 48.293
IPR001932
Pfam
PF00481
71 240 170 1.1E-59
IPR001932
PANTHER
PTHR13832
71 250 180 6.5E-143
IPR015655
PANTHER
PTHR13832:SF686
71 250 180 6.5E-143 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0050400.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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