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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0051900 |
Transcript ID | LotjaGi5g1v0051900.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | BTB/POZ domain-containing protein; TAIR: AT4G31820.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q8H1D3|NPY1_ARATH BTB/POZ domain-containing protein NPY1; TrEMBL-Plants: tr|K7MND2|K7MND2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0051900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8723369..8729161) extracted from Lotus japonicus Gifu genome v1.2.
TGGTGTTGAATGGAAATTTTTTGTTTAAACCATTGTACATGGTCTTACGTATTTAACTCTTACCAAACTTGAGCTAGTCC TATGATTTTTTTTTTGAAATGGTCCAATGAATTAATTAACATTAAATTTATGATCAAATTAATAAAAATGTTCCATGTGA AGAAGACATAGCCAAGAATAGAAATGAGATAAATAGAAAAGAGAAACAAGTCCAACAAAAATGCCTTCTTGACATGAAAA TAAAACATAAGCATAAAGACTAGAATTAGTATATAGGACCTATGTGGTCTGAGCCACCCTGTCACATAGTCCCCTACTTC CTACACAAAACCCACTGTTTATATACATACTACAGTACATACATTACTCCAAACACAACCACCTCACACACACACTCATA AGTCATTACTCACATCCTCCTCTCTCTCCTCTTTTCCATACTAGCCTAGCCTGCAAAGACAAGCGCGTCAGAGCTGAAAA CCGATCATCATTCAATTTCAAGTCGCAGAGAAAAGTGTCTTCGTTTTGCTCAGAGAGGTGCAGAAGAAACAGAGTCACAG AACAAAGAAAACAGAGACCCCACTCTACACACCACACCCTTTCTTCTCTTCCCTTTTGAGATTTGCGCCTCAACCCAAAC ATGATGATGATGATGATCTTCACCGAATCACCACACTCTGCTCTTAAATAAAACCAAAGGCGGCGACCATTTATTTCTCT CTCTGACGCCATTTTCATTTTCTTATCTATATCTCTCTTCGCAGCATTGAATTCAACCCATTTGGTAACACGTTTTCTCA TAAGTGCTCTTTCTGAAGCTTGTTCCCTTTTCTTTGGTTTTGCAACCTCAACTTGCTTGCTTGCTTCAACTTGTTCTATA TTTTTTTGTTTTACTCTCTCGCTCTTCAATACTACCTTTGCTTTTTCGTCATCATCTTCAATGCCCCTCGTAATGCTTTC GATAAATGTTTCGTTTTTTATGTCTAGCGTGGCGTTTTAACGGAAACAGAGCTTCTGGGTAACAGAGCTTCTTCGTGAAA CTCAAGTATCAGAAGTAGTAGCAGTGTTCTACACATTTTTCTTTTGATTTTGAAAGAGGGAAAGAAGAAAGAAAAAGAAG ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAATCTGATGGGAAGTTTGTCAGGTAGGAATATGCTCTTCT CTTTTGTTCCATTCTCAATCTCTGCTTACCCTGTTCTTTGGTTCCTCTGTTTTGTGTGTTTCATGCATTCTAAATTCTCT GTGTGAAGTGTGTCTGTTTTTTCTTTTTGGTATCAGCATGAGGTTAATGTGTGTTACCGTTTTCTGTTGCTGAGTATAAA CTGAGAGGGGTTTGGTCACAGATGCATTTGAGTGAAGTGAGGTACTACTAATTATGGATTCATTCTTGAATGTTGTTGCC TTCTAAAGAAAACCATTATCTTTGTCTACATAGCCACTGAAATAATGTTAATATTCTGTATTATTGCTATGAACTGCATA GAGAGAGAGAGAGAGAGAGTGAGGTGTAAAGCTGATTAATAGTAAGTGGTCCTGCCTTTCGAGCTGTGAATTTCTTGATG AGCTTTGTGGTCCAAATATTGTAAAAGTGGTATGGAGAGTACTCAGCACTTAAAATCATGGATAGATGCAATGGCTATTT GAAACAATATTGGTCCTTATTGTATCATAATTGTAGTTATGACAGTCTATGTGTTTTCTATGCTAGATGACTTTTAAGCA TGTTGTGGGGCACTCAAATTATCGTTACCACCTTGTATAATTGTGTATAAACAAGGTAGGGGAATTTCACTTGTGGGTGG ATTCCTTTCCATAATATCATTGATGGGTGGATTTTCAGTCTGTTAACTCATATTCCAGGACCACATATGAAATGCCATGC ATGTGCTACATGTATTTGACTGAGAAGTATGAACCATATTTGGTCCATGGTCCATGTTTGGAAACTAGGCCACCATGATT TTAGATTTTCTGTGGTTTTCGAACGAGTTTACAAACATGCACTTAGTTAGTTAATAACTTAATATTAATTTGGATGTGAC TTCAGCTAGTTATTTTACTGGGTTTTTTTTTTTAACTTAATGAGTTTTTGGCTCTGTATATGGAAGTTTCCTAGTGTATG AGACATAGAATCACGAGATTTCCAAATCGCTTAAGATCAAAGACTCTGGCAATTTAAACTTCTGGCAAATAATATACAAG GTTTTTTTTTCCCCATGTTTTGGGGGCATGTGATGAAAGTTCATCTTTTGAAGGTATTTAATCGCTTCCCAGATGTTAAA TATAGTGTAGTTCTGTCACATAGTGTGATGAATTTTTTTTTGGAAAGCTCATAGTGTGATGTATCCATGTGAGAGTCTTA ATTAAATACTTCTGGTTCAAGTTTTTTTGACTTGCTGCATTAATTTTGGTTGCTTATTCTGGCATAATTTTGTGTTGTGA CATGAATCATCCATGCCTACATTGAATGTGGCTTATTTTTATTTTGCGGCTGAGGTTTCAGTAAGAGTGATCTCCTTCCT ATCATCCCCCTTTTTGAATTTTTTTTTTCATTTTTTATAAGCTAAGCAATCAATTTTCCAATTATGCAGGTACATATCAT CTGAATTGGCTACTGATATTATGATAATTGTTGGTGAAGTTAGGTTTGATCTTCACAAGGTATGTAACCTGTCTGTATCT TTACTTTGTTGTCTTGCTAAATAAGAAAAGTTGTATTATTACGGATCATTACACTGACCTCCATTGTTGTTGTGCCGTTT GGTTACAGCCATTTTTATGGTTTTGGTTAAAAATAAGTGGGGTTAACTTGCATTGTAACCGGTGGTTTCTGTATTTTTCA GTGAAGTATAAGTGAGTTTCTAACCATAAAAACTTATTTTAGAATAAGTATTTTGTACGTACTTTTCAGTTAGAAAAAAG TAAGTGAGATGTTATTTTACTAGATCACTCATATTGATACATCACCTTGATATTATATCTATCATCTTATATCGATATTA GCAATTTTATTTCTAAAAGTAACTTCACTTTATTCTAGTAAAACAACAACATGCTTTTTATAAAACTTACTTTTATACTT CATTCCCAAACACAAATTAATTTTATCAAGCTTAGTTCTACTAAACTAATTTATATCAAACTTACTTTTACCTAACTAAA AAACAAACTGATCGTCAGCAATAATTCCATTGACACACTTGTTTGGAAAATAATGCCAACCTCCCTTGCTTTGTTTTTTT TTCAAGGGACTTTATGTGTGGTCCTTACATAAAAGTATGTTAGTTTTTTTTTAAACTAAAAATGGTGTTCAAGTGGTATA ATTTTTACCCAGGGAGACATCTTGCTTTATTGATGTTGACTTTTCATAAGTTGCAGTTCCCTCTACTGTCCAAGAGCAAT CGATTGCAAAAGCTTGTGTCAAAGGCTAATGAAGTGAATTCTGATGAAATTTACTTGGATGATTTCCCTGGTGGCCCCAA GGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTAGATGTG CAGCTGAGTACCTTGAAATGACAGAGGACATTGATAAAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCGAGC ATTTTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTCTTGCCATGGTCTGAGGACCTGAAGAT CATTGGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTAGACCCCGCGAACATCACTTGGTCTTACACTTATAACC GGAAATTGACAGAGCTTGTTGGAATAGTTGAGGACAAGTTGCCGCCACGAGAGAACATTGAGCCTGTCCCAAAGGATTGG TGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTATAAAAGGGTAATGATTACTGTGAAATCAAAGGGAAGAATGGA CGGGGTTGTGATCGGGGAGGCATTGAAAGTCTATGCGGTAAGATGGTTGCCTGATTCTGTTGAGGCTTTGGTTTCTGAAG CCCATGCCAGGAGGAACAAAGCTCTTGTAGAAACTATTGTCTGTTTATTGCCGTGTGATAATGGTGTCGGTTGTTCGTGT AGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGAAGCTGACGAGTCGTCAAGGGAAGAATTGATGAAGAGCAT TGGCCAAAAATTGCATCAAGCTTCAGCCAAAGATTTGCTGTTTCCAGCAAGATCACCCCAGATTACGGCGTATGATGTTG ATTTGGTGCAAGATCTTTTGAATCGGTACATGGCTAGTGAAAAGGGAAGCTATGATATGGAGGCAATAGGGAAGGGAAAT AAAGCAAATGATGAATCTATTTTAGGGCATAGGTCTTCATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTACAGAAAT TGCACATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAGTTCCAGAGTTTGCTAGGCCAAATCATG ATGGTCTCTACAGAGCTATTGACATCTACTTAAAGGTAAAACTTTTGTAAACATGGAGTATACTTTGATCACATGATGAA TATAGAATTAACTTGGCGAACACTTTTTGCTTTACTTCTATCCTTATTTCCTTAGAGAAGATGTTTTTACTATTTTTTTT TGTTGATTCCTGTTTCATATTATCCCATATTTTAGGTAACCTGACTCCTTTTCTTTCTGTTGTTACTTTTATTTTCATTA AATTGATTGTTAATCAAACATTTAAAGTCTTCTGTACATGTATATTTTGTAATTGCAATTATCATAGCATTGACTTGAGT CCTTCATCTTCAGGAGCATCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGAATGTCAAGAAATTGA CAGCAGATGCATCGATGCACGCCGCACAGAATGAGCGCCTTCCCCTTCGAGTTGTTGTCCAGGTTCTCTATTTTGAGCAG GTTAGAGCTTCTGCGAATGCCAGAGCACTTAGTAGCAGTCCCCGTGATCCTTCATGTTTGGCGATGAATGGAGATGAGGA ATGTGGAAAACCTGTGGGAGAGAGCTGCCAGTCCCTCAACTGCAAGATGAGTAACTTGAAGATTAAGGATGTAAAACTGA ATAAGAAGAGCAGCAAAAACAGCAGAAGTGGCATTCAGTTGCTGCCATCTAGGTCAAGGAGAATCTTTGATAAGTTATGG CTTGGGGGTAACAAAGGACAAGGAGAAAATAGGAGCCCAGAGACCTCAGGGAGTTCTAATAGTCCTACCTCTCTGGTCCC TGGAGACACCAAATCATCTGGTTCATCCTTAAGACACAGGAGGCATTCTATCTCCTAAAAGGGAATTACATGGAATGATT ATTTTAGCATGAGGAGATTCAAATTGCTGTTAAGTGTAAAGTGGTAGGATGTTAATCTTGTATTTGCATGGCATGCATAG AATTAGGATAAAGGTCTTAGCACATGTTTTGAAATATGTTTACAATTGCTTTTGGAGGTAAAATCAATTCTGGTAGCTTT TGGGGGCCAAAATCAATTATGAAGGAATAGAAGCTCGTCGTGCTATGACTAGCATTTAAAAAAATATGTAATAATATTTG TGTCTTATGTATCTAGGGGCAGTGTCATCTTCATTGGGATAGGGATCTTTATGTTTTATGCAGTGCTGCCCTTTGTATAG AATCATGATCTTTTAATTGCATGTTGTGATTTA
CDS sequence (LotjaGi5g1v0051900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAATCTGATGGGAAGTTTGTCAGGTACATATCATCTGAATT GGCTACTGATATTATGATAATTGTTGGTGAAGTTAGGTTTGATCTTCACAAGTTCCCTCTACTGTCCAAGAGCAATCGAT TGCAAAAGCTTGTGTCAAAGGCTAATGAAGTGAATTCTGATGAAATTTACTTGGATGATTTCCCTGGTGGCCCCAAGGCC TTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTAGATGTGCAGC TGAGTACCTTGAAATGACAGAGGACATTGATAAAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCGAGCATTT TTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTCTTGCCATGGTCTGAGGACCTGAAGATCATT GGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTAGACCCCGCGAACATCACTTGGTCTTACACTTATAACCGGAA ATTGACAGAGCTTGTTGGAATAGTTGAGGACAAGTTGCCGCCACGAGAGAACATTGAGCCTGTCCCAAAGGATTGGTGGG TTGAAGATATATGTGAGCTGGACATTGATCTTTATAAAAGGGTAATGATTACTGTGAAATCAAAGGGAAGAATGGACGGG GTTGTGATCGGGGAGGCATTGAAAGTCTATGCGGTAAGATGGTTGCCTGATTCTGTTGAGGCTTTGGTTTCTGAAGCCCA TGCCAGGAGGAACAAAGCTCTTGTAGAAACTATTGTCTGTTTATTGCCGTGTGATAATGGTGTCGGTTGTTCGTGTAGTT TCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGAAGCTGACGAGTCGTCAAGGGAAGAATTGATGAAGAGCATTGGC CAAAAATTGCATCAAGCTTCAGCCAAAGATTTGCTGTTTCCAGCAAGATCACCCCAGATTACGGCGTATGATGTTGATTT GGTGCAAGATCTTTTGAATCGGTACATGGCTAGTGAAAAGGGAAGCTATGATATGGAGGCAATAGGGAAGGGAAATAAAG CAAATGATGAATCTATTTTAGGGCATAGGTCTTCATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTACAGAAATTGCA CATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAGTTCCAGAGTTTGCTAGGCCAAATCATGATGG TCTCTACAGAGCTATTGACATCTACTTAAAGGAGCATCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAA TGAATGTCAAGAAATTGACAGCAGATGCATCGATGCACGCCGCACAGAATGAGCGCCTTCCCCTTCGAGTTGTTGTCCAG GTTCTCTATTTTGAGCAGGTTAGAGCTTCTGCGAATGCCAGAGCACTTAGTAGCAGTCCCCGTGATCCTTCATGTTTGGC GATGAATGGAGATGAGGAATGTGGAAAACCTGTGGGAGAGAGCTGCCAGTCCCTCAACTGCAAGATGAGTAACTTGAAGA TTAAGGATGTAAAACTGAATAAGAAGAGCAGCAAAAACAGCAGAAGTGGCATTCAGTTGCTGCCATCTAGGTCAAGGAGA ATCTTTGATAAGTTATGGCTTGGGGGTAACAAAGGACAAGGAGAAAATAGGAGCCCAGAGACCTCAGGGAGTTCTAATAG TCCTACCTCTCTGGTCCCTGGAGACACCAAATCATCTGGTTCATCCTTAAGACACAGGAGGCATTCTATCTCCTAA
Protein sequence (LotjaGi5g1v0051900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFMKLGSKPDALQSDGKFVRYISSELATDIMIIVGEVRFDLHKFPLLSKSNRLQKLVSKANEVNSDEIYLDDFPGGPKA FEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDKGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKII GRCIDSIASKTSVDPANITWSYTYNRKLTELVGIVEDKLPPRENIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDG VVIGEALKVYAVRWLPDSVEALVSEAHARRNKALVETIVCLLPCDNGVGCSCSFLLKLLKVAILVEADESSREELMKSIG QKLHQASAKDLLFPARSPQITAYDVDLVQDLLNRYMASEKGSYDMEAIGKGNKANDESILGHRSSLNVGKLVDGYLTEIA HDPNLSLSSFVDLSQSVPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMNVKKLTADASMHAAQNERLPLRVVVQ VLYFEQVRASANARALSSSPRDPSCLAMNGDEECGKPVGESCQSLNCKMSNLKIKDVKLNKKSSKNSRSGIQLLPSRSRR IFDKLWLGGNKGQGENRSPETSGSSNSPTSLVPGDTKSSGSSLRHRRHSIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 601 | 601 | 3.8E-288 | ||
PANTHER | 1 | 601 | 601 | 3.8E-288 | ||
Gene3D | 13 | 117 | 105 | 2.6E-9 | – | |
SUPERFAMILY | 19 | 115 | 97 | 5.57E-17 | ||
CDD | 20 | 124 | 105 | 5.35119E-46 | – | |
Pfam | 25 | 117 | 93 | 4.0E-7 | ||
ProSiteProfiles | 29 | 97 | 69 | 10.179 | ||
ProSiteProfiles | 211 | 488 | 278 | 88.531 | ||
Pfam | 211 | 464 | 254 | 2.7E-87 | ||
MobiDBLite | 567 | 611 | 45 | - | – | |
MobiDBLite | 574 | 599 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Biological process | Auxin transport | The directed movement of auxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
Biological process | Plant organ development | Development of a plant organ, a multi-tissue plant structure that forms a functional unit. |
Expression pattern of LotjaGi5g1v0051900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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