Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0051900 |
| Transcript ID | LotjaGi5g1v0051900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT4G31820.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q8H1D3|NPY1_ARATH BTB/POZ domain-containing protein NPY1; TrEMBL-Plants: tr|K7MND2|K7MND2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0051900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8723369..8729161) extracted from Lotus japonicus Gifu genome v1.2.
TGGTGTTGAATGGAAATTTTTTGTTTAAACCATTGTACATGGTCTTACGTATTTAACTCTTACCAAACTTGAGCTAGTCC TATGATTTTTTTTTTGAAATGGTCCAATGAATTAATTAACATTAAATTTATGATCAAATTAATAAAAATGTTCCATGTGA AGAAGACATAGCCAAGAATAGAAATGAGATAAATAGAAAAGAGAAACAAGTCCAACAAAAATGCCTTCTTGACATGAAAA TAAAACATAAGCATAAAGACTAGAATTAGTATATAGGACCTATGTGGTCTGAGCCACCCTGTCACATAGTCCCCTACTTC CTACACAAAACCCACTGTTTATATACATACTACAGTACATACATTACTCCAAACACAACCACCTCACACACACACTCATA AGTCATTACTCACATCCTCCTCTCTCTCCTCTTTTCCATACTAGCCTAGCCTGCAAAGACAAGCGCGTCAGAGCTGAAAA CCGATCATCATTCAATTTCAAGTCGCAGAGAAAAGTGTCTTCGTTTTGCTCAGAGAGGTGCAGAAGAAACAGAGTCACAG AACAAAGAAAACAGAGACCCCACTCTACACACCACACCCTTTCTTCTCTTCCCTTTTGAGATTTGCGCCTCAACCCAAAC ATGATGATGATGATGATCTTCACCGAATCACCACACTCTGCTCTTAAATAAAACCAAAGGCGGCGACCATTTATTTCTCT CTCTGACGCCATTTTCATTTTCTTATCTATATCTCTCTTCGCAGCATTGAATTCAACCCATTTGGTAACACGTTTTCTCA TAAGTGCTCTTTCTGAAGCTTGTTCCCTTTTCTTTGGTTTTGCAACCTCAACTTGCTTGCTTGCTTCAACTTGTTCTATA TTTTTTTGTTTTACTCTCTCGCTCTTCAATACTACCTTTGCTTTTTCGTCATCATCTTCAATGCCCCTCGTAATGCTTTC GATAAATGTTTCGTTTTTTATGTCTAGCGTGGCGTTTTAACGGAAACAGAGCTTCTGGGTAACAGAGCTTCTTCGTGAAA CTCAAGTATCAGAAGTAGTAGCAGTGTTCTACACATTTTTCTTTTGATTTTGAAAGAGGGAAAGAAGAAAGAAAAAGAAG ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAATCTGATGGGAAGTTTGTCAGGTAGGAATATGCTCTTCT CTTTTGTTCCATTCTCAATCTCTGCTTACCCTGTTCTTTGGTTCCTCTGTTTTGTGTGTTTCATGCATTCTAAATTCTCT GTGTGAAGTGTGTCTGTTTTTTCTTTTTGGTATCAGCATGAGGTTAATGTGTGTTACCGTTTTCTGTTGCTGAGTATAAA CTGAGAGGGGTTTGGTCACAGATGCATTTGAGTGAAGTGAGGTACTACTAATTATGGATTCATTCTTGAATGTTGTTGCC TTCTAAAGAAAACCATTATCTTTGTCTACATAGCCACTGAAATAATGTTAATATTCTGTATTATTGCTATGAACTGCATA GAGAGAGAGAGAGAGAGAGTGAGGTGTAAAGCTGATTAATAGTAAGTGGTCCTGCCTTTCGAGCTGTGAATTTCTTGATG AGCTTTGTGGTCCAAATATTGTAAAAGTGGTATGGAGAGTACTCAGCACTTAAAATCATGGATAGATGCAATGGCTATTT GAAACAATATTGGTCCTTATTGTATCATAATTGTAGTTATGACAGTCTATGTGTTTTCTATGCTAGATGACTTTTAAGCA TGTTGTGGGGCACTCAAATTATCGTTACCACCTTGTATAATTGTGTATAAACAAGGTAGGGGAATTTCACTTGTGGGTGG ATTCCTTTCCATAATATCATTGATGGGTGGATTTTCAGTCTGTTAACTCATATTCCAGGACCACATATGAAATGCCATGC ATGTGCTACATGTATTTGACTGAGAAGTATGAACCATATTTGGTCCATGGTCCATGTTTGGAAACTAGGCCACCATGATT TTAGATTTTCTGTGGTTTTCGAACGAGTTTACAAACATGCACTTAGTTAGTTAATAACTTAATATTAATTTGGATGTGAC TTCAGCTAGTTATTTTACTGGGTTTTTTTTTTTAACTTAATGAGTTTTTGGCTCTGTATATGGAAGTTTCCTAGTGTATG AGACATAGAATCACGAGATTTCCAAATCGCTTAAGATCAAAGACTCTGGCAATTTAAACTTCTGGCAAATAATATACAAG GTTTTTTTTTCCCCATGTTTTGGGGGCATGTGATGAAAGTTCATCTTTTGAAGGTATTTAATCGCTTCCCAGATGTTAAA TATAGTGTAGTTCTGTCACATAGTGTGATGAATTTTTTTTTGGAAAGCTCATAGTGTGATGTATCCATGTGAGAGTCTTA ATTAAATACTTCTGGTTCAAGTTTTTTTGACTTGCTGCATTAATTTTGGTTGCTTATTCTGGCATAATTTTGTGTTGTGA CATGAATCATCCATGCCTACATTGAATGTGGCTTATTTTTATTTTGCGGCTGAGGTTTCAGTAAGAGTGATCTCCTTCCT ATCATCCCCCTTTTTGAATTTTTTTTTTCATTTTTTATAAGCTAAGCAATCAATTTTCCAATTATGCAGGTACATATCAT CTGAATTGGCTACTGATATTATGATAATTGTTGGTGAAGTTAGGTTTGATCTTCACAAGGTATGTAACCTGTCTGTATCT TTACTTTGTTGTCTTGCTAAATAAGAAAAGTTGTATTATTACGGATCATTACACTGACCTCCATTGTTGTTGTGCCGTTT GGTTACAGCCATTTTTATGGTTTTGGTTAAAAATAAGTGGGGTTAACTTGCATTGTAACCGGTGGTTTCTGTATTTTTCA GTGAAGTATAAGTGAGTTTCTAACCATAAAAACTTATTTTAGAATAAGTATTTTGTACGTACTTTTCAGTTAGAAAAAAG TAAGTGAGATGTTATTTTACTAGATCACTCATATTGATACATCACCTTGATATTATATCTATCATCTTATATCGATATTA GCAATTTTATTTCTAAAAGTAACTTCACTTTATTCTAGTAAAACAACAACATGCTTTTTATAAAACTTACTTTTATACTT CATTCCCAAACACAAATTAATTTTATCAAGCTTAGTTCTACTAAACTAATTTATATCAAACTTACTTTTACCTAACTAAA AAACAAACTGATCGTCAGCAATAATTCCATTGACACACTTGTTTGGAAAATAATGCCAACCTCCCTTGCTTTGTTTTTTT TTCAAGGGACTTTATGTGTGGTCCTTACATAAAAGTATGTTAGTTTTTTTTTAAACTAAAAATGGTGTTCAAGTGGTATA ATTTTTACCCAGGGAGACATCTTGCTTTATTGATGTTGACTTTTCATAAGTTGCAGTTCCCTCTACTGTCCAAGAGCAAT CGATTGCAAAAGCTTGTGTCAAAGGCTAATGAAGTGAATTCTGATGAAATTTACTTGGATGATTTCCCTGGTGGCCCCAA GGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTAGATGTG CAGCTGAGTACCTTGAAATGACAGAGGACATTGATAAAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCGAGC ATTTTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTCTTGCCATGGTCTGAGGACCTGAAGAT CATTGGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTAGACCCCGCGAACATCACTTGGTCTTACACTTATAACC GGAAATTGACAGAGCTTGTTGGAATAGTTGAGGACAAGTTGCCGCCACGAGAGAACATTGAGCCTGTCCCAAAGGATTGG TGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTATAAAAGGGTAATGATTACTGTGAAATCAAAGGGAAGAATGGA CGGGGTTGTGATCGGGGAGGCATTGAAAGTCTATGCGGTAAGATGGTTGCCTGATTCTGTTGAGGCTTTGGTTTCTGAAG CCCATGCCAGGAGGAACAAAGCTCTTGTAGAAACTATTGTCTGTTTATTGCCGTGTGATAATGGTGTCGGTTGTTCGTGT AGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGAAGCTGACGAGTCGTCAAGGGAAGAATTGATGAAGAGCAT TGGCCAAAAATTGCATCAAGCTTCAGCCAAAGATTTGCTGTTTCCAGCAAGATCACCCCAGATTACGGCGTATGATGTTG ATTTGGTGCAAGATCTTTTGAATCGGTACATGGCTAGTGAAAAGGGAAGCTATGATATGGAGGCAATAGGGAAGGGAAAT AAAGCAAATGATGAATCTATTTTAGGGCATAGGTCTTCATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTACAGAAAT TGCACATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAGTTCCAGAGTTTGCTAGGCCAAATCATG ATGGTCTCTACAGAGCTATTGACATCTACTTAAAGGTAAAACTTTTGTAAACATGGAGTATACTTTGATCACATGATGAA TATAGAATTAACTTGGCGAACACTTTTTGCTTTACTTCTATCCTTATTTCCTTAGAGAAGATGTTTTTACTATTTTTTTT TGTTGATTCCTGTTTCATATTATCCCATATTTTAGGTAACCTGACTCCTTTTCTTTCTGTTGTTACTTTTATTTTCATTA AATTGATTGTTAATCAAACATTTAAAGTCTTCTGTACATGTATATTTTGTAATTGCAATTATCATAGCATTGACTTGAGT CCTTCATCTTCAGGAGCATCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGAATGTCAAGAAATTGA CAGCAGATGCATCGATGCACGCCGCACAGAATGAGCGCCTTCCCCTTCGAGTTGTTGTCCAGGTTCTCTATTTTGAGCAG GTTAGAGCTTCTGCGAATGCCAGAGCACTTAGTAGCAGTCCCCGTGATCCTTCATGTTTGGCGATGAATGGAGATGAGGA ATGTGGAAAACCTGTGGGAGAGAGCTGCCAGTCCCTCAACTGCAAGATGAGTAACTTGAAGATTAAGGATGTAAAACTGA ATAAGAAGAGCAGCAAAAACAGCAGAAGTGGCATTCAGTTGCTGCCATCTAGGTCAAGGAGAATCTTTGATAAGTTATGG CTTGGGGGTAACAAAGGACAAGGAGAAAATAGGAGCCCAGAGACCTCAGGGAGTTCTAATAGTCCTACCTCTCTGGTCCC TGGAGACACCAAATCATCTGGTTCATCCTTAAGACACAGGAGGCATTCTATCTCCTAAAAGGGAATTACATGGAATGATT ATTTTAGCATGAGGAGATTCAAATTGCTGTTAAGTGTAAAGTGGTAGGATGTTAATCTTGTATTTGCATGGCATGCATAG AATTAGGATAAAGGTCTTAGCACATGTTTTGAAATATGTTTACAATTGCTTTTGGAGGTAAAATCAATTCTGGTAGCTTT TGGGGGCCAAAATCAATTATGAAGGAATAGAAGCTCGTCGTGCTATGACTAGCATTTAAAAAAATATGTAATAATATTTG TGTCTTATGTATCTAGGGGCAGTGTCATCTTCATTGGGATAGGGATCTTTATGTTTTATGCAGTGCTGCCCTTTGTATAG AATCATGATCTTTTAATTGCATGTTGTGATTTA
CDS sequence (LotjaGi5g1v0051900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAATCTGATGGGAAGTTTGTCAGGTACATATCATCTGAATT GGCTACTGATATTATGATAATTGTTGGTGAAGTTAGGTTTGATCTTCACAAGTTCCCTCTACTGTCCAAGAGCAATCGAT TGCAAAAGCTTGTGTCAAAGGCTAATGAAGTGAATTCTGATGAAATTTACTTGGATGATTTCCCTGGTGGCCCCAAGGCC TTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTAGATGTGCAGC TGAGTACCTTGAAATGACAGAGGACATTGATAAAGGAAACTTAATTTTCAAAATTGAGGTGTTTCTTACCTCGAGCATTT TTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTCTTGCCATGGTCTGAGGACCTGAAGATCATT GGGAGATGCATAGATTCCATAGCTTCTAAAACTTCTGTAGACCCCGCGAACATCACTTGGTCTTACACTTATAACCGGAA ATTGACAGAGCTTGTTGGAATAGTTGAGGACAAGTTGCCGCCACGAGAGAACATTGAGCCTGTCCCAAAGGATTGGTGGG TTGAAGATATATGTGAGCTGGACATTGATCTTTATAAAAGGGTAATGATTACTGTGAAATCAAAGGGAAGAATGGACGGG GTTGTGATCGGGGAGGCATTGAAAGTCTATGCGGTAAGATGGTTGCCTGATTCTGTTGAGGCTTTGGTTTCTGAAGCCCA TGCCAGGAGGAACAAAGCTCTTGTAGAAACTATTGTCTGTTTATTGCCGTGTGATAATGGTGTCGGTTGTTCGTGTAGTT TCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGAAGCTGACGAGTCGTCAAGGGAAGAATTGATGAAGAGCATTGGC CAAAAATTGCATCAAGCTTCAGCCAAAGATTTGCTGTTTCCAGCAAGATCACCCCAGATTACGGCGTATGATGTTGATTT GGTGCAAGATCTTTTGAATCGGTACATGGCTAGTGAAAAGGGAAGCTATGATATGGAGGCAATAGGGAAGGGAAATAAAG CAAATGATGAATCTATTTTAGGGCATAGGTCTTCATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTACAGAAATTGCA CATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAGTTCCAGAGTTTGCTAGGCCAAATCATGATGG TCTCTACAGAGCTATTGACATCTACTTAAAGGAGCATCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAA TGAATGTCAAGAAATTGACAGCAGATGCATCGATGCACGCCGCACAGAATGAGCGCCTTCCCCTTCGAGTTGTTGTCCAG GTTCTCTATTTTGAGCAGGTTAGAGCTTCTGCGAATGCCAGAGCACTTAGTAGCAGTCCCCGTGATCCTTCATGTTTGGC GATGAATGGAGATGAGGAATGTGGAAAACCTGTGGGAGAGAGCTGCCAGTCCCTCAACTGCAAGATGAGTAACTTGAAGA TTAAGGATGTAAAACTGAATAAGAAGAGCAGCAAAAACAGCAGAAGTGGCATTCAGTTGCTGCCATCTAGGTCAAGGAGA ATCTTTGATAAGTTATGGCTTGGGGGTAACAAAGGACAAGGAGAAAATAGGAGCCCAGAGACCTCAGGGAGTTCTAATAG TCCTACCTCTCTGGTCCCTGGAGACACCAAATCATCTGGTTCATCCTTAAGACACAGGAGGCATTCTATCTCCTAA
Protein sequence (LotjaGi5g1v0051900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFMKLGSKPDALQSDGKFVRYISSELATDIMIIVGEVRFDLHKFPLLSKSNRLQKLVSKANEVNSDEIYLDDFPGGPKA FEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIDKGNLIFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKII GRCIDSIASKTSVDPANITWSYTYNRKLTELVGIVEDKLPPRENIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDG VVIGEALKVYAVRWLPDSVEALVSEAHARRNKALVETIVCLLPCDNGVGCSCSFLLKLLKVAILVEADESSREELMKSIG QKLHQASAKDLLFPARSPQITAYDVDLVQDLLNRYMASEKGSYDMEAIGKGNKANDESILGHRSSLNVGKLVDGYLTEIA HDPNLSLSSFVDLSQSVPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMNVKKLTADASMHAAQNERLPLRVVVQ VLYFEQVRASANARALSSSPRDPSCLAMNGDEECGKPVGESCQSLNCKMSNLKIKDVKLNKKSSKNSRSGIQLLPSRSRR IFDKLWLGGNKGQGENRSPETSGSSNSPTSLVPGDTKSSGSSLRHRRHSIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 601 | 601 | 3.8E-288 | ||
| PANTHER | 1 | 601 | 601 | 3.8E-288 | ||
| Gene3D | 13 | 117 | 105 | 2.6E-9 | – | |
| SUPERFAMILY | 19 | 115 | 97 | 5.57E-17 | ||
| CDD | 20 | 124 | 105 | 5.35119E-46 | – | |
| Pfam | 25 | 117 | 93 | 4.0E-7 | ||
| ProSiteProfiles | 29 | 97 | 69 | 10.179 | ||
| ProSiteProfiles | 211 | 488 | 278 | 88.531 | ||
| Pfam | 211 | 464 | 254 | 2.7E-87 | ||
| MobiDBLite | 567 | 611 | 45 | - | – | |
| MobiDBLite | 574 | 599 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Auxin transport | The directed movement of auxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Plant organ development | Development of a plant organ, a multi-tissue plant structure that forms a functional unit. |
Expression pattern of LotjaGi5g1v0051900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…