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LotjaGi5g1v0054400.2

Overview

Field Value
Gene ID LotjaGi5g1v0054400
Transcript ID LotjaGi5g1v0054400.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151RT76|A0A151RT76_CAJCA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0054400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:9258758..9265301) extracted from Lotus japonicus Gifu genome v1.2.

GAATCAAATATTAATATGATATTATTGTATAACAGATATATCAGTTATTAGACAATATCACCTTAATGAGGAATCTTTAT TCTCAAAATGCATAAGAACAAGTCAATATTGGGCCAATGTACTCGACCTATAATTTTATTCTGTAACAAAACCAATCATA TGTGTTGTTGATGCAATTCAAAAGTAATAACGTTCTATATCATCATATTGATTTTTATTTTTTTAGTTTTATATTGGAAG GTGCTAACTTTTGTGTCAAAACAGCTTGTACCCAGGAAGAGGTTAACAGGGTCATAGAATCAGCAAAAACAGCTCAAAAA TCATGGGCCAAGACTCCACTGTGGAAAAGAGCAGAGTTGCTTCACAAAGCTGCAGCATTGCTGAAGGAGCACAAAGCCCC CATTGCAGAGTGCCTTGTTAAGGAGATTGCAAAGCCAGCTAAGGATGCAGTCACTGAAGTATGTTCAACTGAAACTTTTC ATTAAAGACCACTTTGTTTTCTACTCTTTTCAACTTTCATGTTTACTTTTAGTTTTGCATTCAAATATTATGTATATATC ATTTTAGGAATTCTTAATGAGAATTATAGCATGTTAGGATCAGCTTCAATTTCTTCAAAATCAATTCTGACACTCAGAAC AAATTTTTTTCCCCTATAATGGATTTAAACTCTAGAATCAATTATTGAAGGCTCACTTAGATGTTTATATTGTAAATGCT TTTGAGATTTGGTCATTTGGGTCTTCACTTGCATTATACTTTTGATCATATGTGAATGCTGTGATGTCTATGTAGGTTGT CAGATCAGGGGATTTGGTGTCCTACTGTGCTGAGGAAGGTGTGAGGATTCTTGGGGAAGGAAAATTTCTGGTCTCTGATA GTTTTCCAGGCAATGAAAGAACCAAATACTGTCTCACTTCCAAGGTATTTTGACCTAGTTTTTTGGGGGTAATGATGGTT CACACCTATTAACAGGCATACAAAAGTGGTAACTAGTATTAACTAAGAAAGTTGCAATGTCCAAAATCTTCTTGTTATTT TTTCACCTTTCTGAGTGCAATTTTTCTATTATAGTCTGTTTGAATCTACTTTTCTTTCCTTAGTATCAATTCCAGCACCT AACCTACTCATAGAAAATTCTTCCCAAATTTGATTTTGGGTTTAGAATCAATTGCAGAAGGATTTCTAAACATACATTGA GTTTAATATTGAGGTGATCGTTGAGTACTTGCCCCCTCAAACAGTAGTGTCAATCCAGGAATGACAAAACCTATGCCGAA AATGAAAATGAAAATTGAAACTGATCATACCCTTAGTTTTTGTATGTCTGAAGGTTATACTACAAACAAAGTGCTTTGAA AATACAAAGTAGCAATTGAATTGGTTGTTGTTTGGCTTATCCATTTCTTGGGGCAAAGGCTTCCATTTGACAGGAATATG ACCAATGTCATTTCAAATCTTGAACTTCAAATGAGTTCAATCTGTTTTCTGTTAAGTTATTTATGTTTAGTTTAAAAATA TTTGCCAGATTGCCTAGGATGTTCATATTAACACATGTCAACGACAATTCATTGTTTTCATCATCAGCAATTTGTTTTAC TAGACTTTAAAGCATACTCACTTTGGATATCGTTCCCTCCTATTCAACAATTTATGACAGAATTAGAAGTTAGCTCGAAA AGGTAACAATGAATTGCATTCCACTGATAGCAATCTGTTTGAATTTTGAATGCTAATATCTAATTTGCTATATGTTTGGA TGGGCATGGAGGAACTTTGCTTCATTACATCATGGCTTTAATATTAATGACTATAAGAGAAAGGTTATGGTTATACCATC TCTTGTGTCACTTTTGACACACATACTCCTATTTTATCTGTAATAAGTGTTTCTAAGAAGGATAACTCTTAAATCTTCGT ATTTTTGACACACATCCGAAATTGATTACTATCTTTTGGAAAAAAATTATATGAAGGATAACTCTTAAATCTTCATATTT TTGACACAACCGAAATTGATTACTTTCTTTTGGAAAAGAGTTTATAAGAAGGATAACTCTTAAATCTTCGTATTTTATAC TTCATTAAAATTGAGTTATGCGTCTATTTCCTCTAATTATTTAAAGGAAGCCATTACAAGGTTGGATTTCTTATGGAAAT GCAAAGAAAATAAGATGTGTGAGGAGAGTCTGGTTGCAGGGTAGGCAATAGTAATTAGGACTGGAAGTACTACTTTTTCA AATTTAATTTCCCCTTGTTACTTCCCTTTGCAATATCAGTCTATAGCATATACTAGACTTTATGCTCGAGATTGTATATA ATGTGTTATTTTGAGATATTTTCTTGTATGCAGATTCCACTAGGAGTTATTTTAGCTATTCCACCCTTTAACTATCCTGT TAATCTGGCTGTTTCAAAGATTGGTCCGGCGCTTATTGCTGGAAACTCCATTGTGCTTAAACCTCCAACCCAGGTATGCT ACTGTTCATAGGGCATGTACACTTATTAATTATAGTTTTACAATTTATATAATTTAAATACAATTTCAAGTACCATATAT TTTGTATGTCTTTATGAGTCAGACAAAGACGAGATATAAATCATGGATCAACAAAGCCCTCTCATGGACTTTCTTAGGAA TAAGAAAGAGGAACCTTATGTAACTGCCGTGGAATAAGGTTTGGTTAACTTCCATAACTCCATTTCCATGTTTTAACAGG GTGCTGTTGCTGCACTACATATGGTGCATTGCTTTCATTTGGCTGGCTTCCCAAAAGGTCTTATTAGCTGTGTGACAGGA AAAGGATCTGAGATTGGTGACTTTCTTACTATGCATCCAGGGGTGAACTGCATAAGGTAAGTTTTCACTTCTTTAGCATA TCCTGTTCTGCTTTTTGTCCACTATTCCGGTGTTGGTTTATTGTTTTCTTTACAGTAATTCATGTGATTTCTAATCCTCA AATGTAGTTCCAACTTCCAACAACTGTTAGAAATATAATATAAAATCATTCATGTGTCATTTACCCAATAGCTTAAGCTT TTAGCACAGTTCGCTCATGATATAGTATTAGAGTCTCTATGACCATGTGGTCTAGAGTTTGACCTTTTTTCCAGTTAGGC CTCTTACATGAGCAAACGTGTTAGAATGGTTCATGACACAAGCAAGATACTAGACATCTCATCTAGCCTTGATAGGTACC CACATGGCATCCTTTAGTTAGTAGCAGTTAGTAAGAGTGTTGTTAGCGGTTCAGTTAGAACTCTAGTAGCTCATAGAGTT AGTTAAGAGGAGGGATACTGTAAATAAGGGTGTTAAGATGGTTAATCATCTTTTGGATCATTTAGGAAATTGTGACTTAG GAGAGAGGTGAGTCTCTCAAATGCTCACCAGATTCATGTATCCTTCTCTAATTCCTATTTGGGATTTGGGTTTATCTTGC ACAATAATACTCTTTCTCTCTACATCCTTGGCTGGTTTTATCATGCCTTTCGTTATCAATTTATCTTTTAGTTTCAAAAG TAATTATAAGATAATAACGTGAAAACCTTTGGGTTATTGCATTAAGTTATGAAGATAGAAAAGTTCCTACATGTTCTTTT GGTTACTTGAGAGGTGTTTCTTCATTGCAAATGGAAATTTTCCCACCTAATTCGTAATTTCGCATTGATCCTCAGTTTCA CAGGTGGCGACACTGGAATAGCAATATCAAAGAAATCTGGAATGATTCCTCTTCAAATGGAGCTGGGTGGAAAAGATGCT TGCATTATTCTTGAAGATGCTGACTTGGATTTGGCAGCTGCTAACATTGCAAAAGGAGGTTTCTCCTACAGGTAACAATA GCATGTAGCACCTTCAGCCGAAAATTATCCAGCTTTTAAAAATGTGTTGTATGAGAAATATCATTAGTTTAATTTGCATG CATTGTCACTGATATCAAAACAGTTCATACCCACATCAACTTAATTAGTCACATCATTTATAATTTTAATTAAATTTAAA ATTTACTTTCTGACGTGTCGTACAATCATTGAGTATCAGTGCAAATGTAAAGAAGTTTTACACTGACAGTGCATATATAT TAAATCAAAATATCAAATTCTCTTGAACTATCCTTCTCATTGTGTTTGCATTAGACCCAATTACAGCAATAGTCCTCAAT TCATATTCAAATGCTCTTAAATTTTTTCTCTATCAGTGGTCAGAGATGCACGGCTGTGAAGGTTGCCTTGGTCATGGAAT CAGTTGCTGACACTCTTGTTAAAAAAATCAATGACAAAGTTGCAAAGTTAACTGTTGGGCCTCCTGAGGATGACTGCGAT ATCACCCCAGTTGTAACAGAATCCTCTGCTAACTTTATAGAAGGGTTGGTAATGGATGCTAAGAAGAAAGGAGCAACATT CTGCCAGGAATACAAAAGAGAGGGAAATCTCATATGGCCAGTTCTGTTGGATAACGTTCGTCCTGACATGAGGATAGCAT GGGAGGAGCCGTTCGGACCGGTTTTGCCTGTTATCAGAATCAATTATGTTGAAGAAGGAATCCACCATTGTAATGCTAGC AATTTTGGCCTTCAGGTATGGCATCAGTTGGTAAATGTGCATTCATTCAATTCAAAGGACAAAAATATCACATCATAGAA GATGGCTACATTCTATGTTTCACTGATGTTATTATAAGTTTTAATTCTGTAACTTTTTTTTCAAAAATAAGATGCTCTTA TATGAATAACTGTCTAAAGTGGGGTTGTCTATTTTGTTCTTACTTTGTTTTCATTTTATTAGTGATGACTTGAGAGTGTG ACATCATAAGACATAATTTACTCCTCATTCTCAGTTAAAATGCCATTAATCTATTTCAGGGGCAGAATTTTTTCTTACTT CATCTAACACTTCAATTCTATGTGTAATGCAGGGATGTGTCTTCACAAGAGACATAAACAAAGCAATGCTGATAAGCGAT GCGATGGAGACAGGAACAGTTCAAATTAATTCAGCACCAGCTCGTGGACCTGATCACTTTCCTTTTCAGGTGCAATTTTT GTCATCCTTCATCTAGCAAAGTTGCCATAAAGCTTCATAGCTTGTAGAAATCTTCATAATACAAATCTTTTGTTTTTAGA AAATAAATCTCAAGGTTTCTAGAGCATGGTTTCTCCTTTATACCATGCAAACATGATTAATTGATATTATGAATTATAGA ATCTAATTAAGATTTAAAATTGGGATTATGCTCACAATTGCATTGCAACTATTGTGGTCAATTATGGCCAATGCATAATG TGTTTGGAAATGAGTTGTGCACACGCTGCAAGTACACATCTGTGTAGAAGCTATAACTTCATGCTTTTGGGGAAATGCGC ATATACATGCATTGTTAGAAATTAGGGTATGATAATCCTGGATAACTTCGAAGAATCGTGTTCGTACACTTTCCGAACAA AGTATTTCGACTCTATTCTTGCCTGGGTTCATGAAATCCTTGTTAGGATAATTCTGAAGAGCAATCTGCTTCAGGCAAAT GAAGAACAGATCAAGAATGTAGAGAGATATCGGTTTTGTTTTCTGTGTGTCAAACTGAAGGCCAAATGACTCCTTTATAA GGAGTTTGTTTCAGAAACTGGGAAAAAACGGTTAATAAAACCGAATGTCTTTTCGAAAAATTTCGAGGGGCTCCGCCCCT TGGAACCCCGCAATCTAATCGCGGTCGATTATGCGTTGGCTCAACAAGCGTGCACTCCGCACTACCCTTACTCGTTTCCG AGCTTAACGCATAATCGCATCGGCCTTCAATAAATCACATTACTACTAAAATCCATTGATGATACTAAAATCACCAACAT GCATCCCAGTGTGGTTCCAAACAAGCAAGAAACCTACAATCGTGGACTATCACGGTTGTCACAGTTGCCACAACTGAGAT GTTATGGCGCAGTCCGTGATTCAAAACCTATTAAGAACATTGTTGTCAAATAGCAGATATCACAACGCTATGACAGCTAT AGTGTAGTACTGTGAGGGTTCACCGCTATCCGATATTTGCCTCTAATTTCCGCTTTGAGGTCTTGATATTGCGGATTTTT TACTTTCCGCTATTTTTTGCGATCTGCAATTAACAACGATCTGCAATTAACAACACTGATTAAGAATAAATGTGTACCCA TGCAGATTCATAAAGATATTTTAGTACATTTTTTTTAAAATAAACTCTTTTCTCTGTCTAAACTGCTGAATATGATTTGT GGCAGGGTCTGAAGGATAGTGGTATTGGTTCTCAAGGAATCACCAACAGTATTAACATGATGACAAAGGTTAAGACCACA GTAATCAACCTACCAGCCCCTTCTTACACTATGGGATGAGATACCTGATAAAATTGCAAGTTACTCAAAGCAATAGTCAT CACTAATTAAGGAAGAGGAGGTGCTTCCCAATTCCCCATGCTTCAGTTTAGCCTAGTGGAGCGAGTCATTGACAGTTCTG ATTGCATATAAATAATCTTTGTCAGATTTGACTTATATTGTATGTTTGTATGAATAAAAGGTAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0054400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCATAAGAACAAGTCAATATTGGGCCAATGTGCTAACTTTTGTGTCAAAACAGCTTGTACCCAGGAAGAGGTTAACAG GGTCATAGAATCAGCAAAAACAGCTCAAAAATCATGGGCCAAGACTCCACTGTGGAAAAGAGCAGAGTTGCTTCACAAAG CTGCAGCATTGCTGAAGGAGCACAAAGCCCCCATTGCAGAGTGCCTTGTTAAGGAGATTGCAAAGCCAGCTAAGGATGCA GTCACTGAAGTTGTCAGATCAGGGGATTTGGTGTCCTACTGTGCTGAGGAAGGTGTGAGGATTCTTGGGGAAGGAAAATT TCTGGTCTCTGATAGTTTTCCAGGCAATGAAAGAACCAAATACTGTCTCACTTCCAAGATTCCACTAGGAGTTATTTTAG CTATTCCACCCTTTAACTATCCTGTTAATCTGGCTGTTTCAAAGATTGGTCCGGCGCTTATTGCTGGAAACTCCATTGTG CTTAAACCTCCAACCCAGGGTGCTGTTGCTGCACTACATATGGTGCATTGCTTTCATTTGGCTGGCTTCCCAAAAGGTCT TATTAGCTGTGTGACAGGAAAAGGATCTGAGATTGGTGACTTTCTTACTATGCATCCAGGGGTGAACTGCATAAGTTTCA CAGGTGGCGACACTGGAATAGCAATATCAAAGAAATCTGGAATGATTCCTCTTCAAATGGAGCTGGGTGGAAAAGATGCT TGCATTATTCTTGAAGATGCTGACTTGGATTTGGCAGCTGCTAACATTGCAAAAGGAGGTTTCTCCTACAGTGGTCAGAG ATGCACGGCTGTGAAGGTTGCCTTGGTCATGGAATCAGTTGCTGACACTCTTGTTAAAAAAATCAATGACAAAGTTGCAA AGTTAACTGTTGGGCCTCCTGAGGATGACTGCGATATCACCCCAGTTGTAACAGAATCCTCTGCTAACTTTATAGAAGGG TTGGTAATGGATGCTAAGAAGAAAGGAGCAACATTCTGCCAGGAATACAAAAGAGAGGGAAATCTCATATGGCCAGTTCT GTTGGATAACGTTCGTCCTGACATGAGGATAGCATGGGAGGAGCCGTTCGGACCGGTTTTGCCTGTTATCAGAATCAATT ATGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGCCTTCAGGGATGTGTCTTCACAAGAGACATAAACAAA GCAATGCTGATAAGCGATGCGATGGAGACAGGAACAGTTCAAATTAATTCAGCACCAGCTCGTGGACCTGATCACTTTCC TTTTCAGGGTCTGAAGGATAGTGGTATTGGTTCTCAAGGAATCACCAACAGTATTAACATGATGACAAAGGTTAAGACCA CAGTAATCAACCTACCAGCCCCTTCTTACACTATGGGATGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0054400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MHKNKSILGQCANFCVKTACTQEEVNRVIESAKTAQKSWAKTPLWKRAELLHKAAALLKEHKAPIAECLVKEIAKPAKDA VTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNSIV LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKSGMIPLQMELGGKDA CIILEDADLDLAAANIAKGGFSYSGQRCTAVKVALVMESVADTLVKKINDKVAKLTVGPPEDDCDITPVVTESSANFIEG LVMDAKKKGATFCQEYKREGNLIWPVLLDNVRPDMRIAWEEPFGPVLPVIRINYVEEGIHHCNASNFGLQGCVFTRDINK AMLISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKTTVINLPAPSYTMG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42991:SF4
18 466 449 0.0 –
PANTHER
PTHR42991
18 466 449 0.0 –
Pfam
PF00171
18 453 436 7.5E-139
IPR015590
SUPERFAMILY
SSF53720
18 457 440 1.2E-122
IPR016161
Gene3D
G3DSA:3.40.605.10
18 235 218 1.6E-132
IPR016162
CDD
cd07082
19 457 439 0.0 –
ProSitePatterns
PS00687
233 240 8 -
IPR029510
Gene3D
G3DSA:3.40.309.10
238 421 184 1.6E-132
IPR016163
ProSitePatterns
PS00070
261 272 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0054400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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