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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0056000 |
| Transcript ID | LotjaGi5g1v0056000.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT1G51340.1 MATE efflux family protein; Swiss-Prot: sp|Q9SYD6|DTX42_ARATH Protein DETOXIFICATION 42; TrEMBL-Plants: tr|A0A0L9TU85|A0A0L9TU85_PHAAN Protein DETOXIFICATION; Found in the gene: LotjaGi5g1v0056000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9474087..9478224) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTAAAACCAGCGCAACAATACTTGACGTTGAGGTCATTTGGTGCACCAGCTGTTATTCTTTCTATGGCAATGCAAGG AGTTTTTCGAGGAATCAAAGATACAAGAACTCCTTTGTATGCTACAAGTACGCCATTCCTCTCGTTACCTCAAATCAGTA TTTATATTCAGATCATGATCATGATGAAGTACACTTATTATCACACAGTAATCTGTGAAGTTTAACTGCAGTTGTGGGAG ATTTAGCAAATATCATTTTAGATCCATTACTTATATTTGTAGTCCGGTTGGGAGTCAGTGGGGCCGCCATTGCTCATATT ATCTCCCAGTAAGTTCACTTTCAGTATTCATCTCTGATTCTAGATGTGTCTTTATCACAAACATGATATTTGAATTCAGA AGTCATGGTTCACTTCTCTTTCTCATTTCATTTATCTTGATCTGATTTAATAGGTACTTGATTACCTTAATTTTGTTCTG GTATTTAATGAAACAAGTTGTTCTCCTTCCGCCAAGTATCCAAGACTGCCAATTTGGGAAGATTCTGAAAAATGGTTATA ATTTCCTTCTATTTATTTGTTTTCTCAGAATCTCCGGGTTAATTTCATTTAGCGGCTAAACCTCCATATTACTATGTATA GCATGGTTTTAAAAATTTGATCTGCATAGACATTAGATTTCTTGCTTATTTGAACTTGACATCCTGTTTATAGAAGTCTG CGGCCTTGCCCACAGAAACACTAGCATATCTTATAACAGTTTTCTTGCGGAAATTACATTTCACCATCAGAAGATTTGGG TCTCTCTTTATTTGGAAGTTTTGTAGAAGTCCCACATTTGGTGGAGGAAAAGACTTTGTTATCAAACTTTTTTATAAATG AAGTTGAAGTCTCACATTGGATGGTGAAGAACTTATTTTATCCACCTTCTTCTAAAATTGGAGTTGAGTTTCGAAAGCAA AACACATTAAGAGAAATCCTCTTATCAACCTCTAGTTCTTATGATGGAGATATCTCTCTCACTCTTTATACTAAAGAGGA TTTATCTTGGTGTGTTTTGCTCTCAAACCTCAGCTATTACTTTTTAAGAGAGTTATAGCATAAGTTTCTTCAGGACTCAA TATTTGACTTCAACTTCATTTATAAGAAAGTTGGATGGCACAGTCTTTTGCTCCAAAATAAGGAGAACATTTCATTATGG TTCAGAAAGCTTCTTTTCTCTCCTGCTGGTTGAATTTGAACAATCTTTTAGACTTAAATTTGAAACATGTTTGATACATT CTACTTGAGAAAGTGAAAGTGGGATAAAAACAGTGAATATTATCTCCTGATGAAAAATACTTAACATGATTACAATATAT CTAGGTTACATCTAGTCTGTCTAATAAAAGGAAGAAGTGAATTCTTGAGAACATTAATTATACCAAACAAAAATTATTGA GAACAAATCTTTACCTTTTTTTTCACCACTTTGATGTAGGGTTTCTATTAATGATTAAAGTTGTAGCTGTGACATCATGT GTGACCTTGTCAGCATCCCTAGCAGCAAGGCAAGGATCAACAGTGATGGCTGCGTTCCAAATCTGCTTACAGATTTGGAT GGCAACCTCTTTGCTTACTGATGGATTGGCTGTTGCTGGACAAGTAAGAAGTGAAATTCTTATGAATGTACACATTTTGC TAAATAGATTGGTGGGATGAAAAATTACTATTTGTTTCCTAGTACAGATATTACTAAAATCTTTGAGTCAAATGACTTGT ACAACCAAAGAATTGAAAACACGAACTGTGAAAGAAATTAAGAAACTAGCAAGCTAATTACATTCAGAAAATCTCCGGCT TACTATCTTTCACGAGGCAAAAAACTTAAGTTGTTGGGTGAAGACACATTGATAGTTTTATATTATACTTCTAACATCCC CACTCACACAAGAGCCCTTTGGGCTTGAAGCGTGAACAATGCACAAACCCATCTACCATGTGCTCAAGTTCAACTTTTTG TTATAATAATGGAGGTAACAAGGATTAAACTCACTTAGTTATAGAGACTCTAATACAAAGTCCTGAACCAACTATCCCAA AAGCTTAAGTTGTTGGGTGAAGACACATGAATCATTATACGTCTAACACTATCTATTTGAGAACCGTGAGAAATCAGGCA GCAAATATACTGACTTAGCAACTAAGTCACATTTCAGATCTATTAGTCAATTTGCATGCCAACACATTTATTTATAGTTA ATGATAGACAGAGAAAATTGTTATAATTGACCAGGGGATTAACTATCAATGATGAAAGGGATACACCAGTCATTATAGGG ATTTATTACTTGTAAACTGAGATATTTTTTCCTAGTTATGACATGTGCCAAAGCCAACTATAAAGATCATTGGATCTTCC ATACCGTAGTTGTTATGCCTGTTTAAAAAGAACACAAATTTCAAGGTCAATTTAATTGGTGATGTTTTTCATGCTTTTAT GTTGCATTTGCCACAGAATCATCATGATTTGCCTTAAGTCTCTATTTATGATAAATCTATCTTCATTTAAAAGTATTCAC TCCAGATAACTTTATTCTGAGGAAAAAAGGATGTTCCTATTATACATTCTAGTCAATATAGACCATAATCAAAAAGTCTT TGCAGGCCATTATTGCAAGTGCATTTGCAAGAAGGGATTACAGCAAGGTCATATCATCTACTTCACGTGTGCTGCAGGTA TTTCAAATTGTTATCCTGAATGATTTGTTTGCTTTTTGTGCACTTAATTCGCTTAACTTGAATAATTGGATCACGCAGCT TGGCTTGATTCTAGGGTTGGTACTTTCATTCCTTCTATTTAGCCTACTACCATTTGCTTCTAAGTTATTTACAAATGACA TCAATGTTCTGCAACTTATCAGTATTACTATTCCAGTAAGTAATGTCGCTATTGCATATAAAACAAGAGACCTCTCTCCT TCTAGCAATATATTGGTTTCACAAATAGAGAGGGTAATATATTTTTCTAACCGTTTTCTTGATGATTACCTACTAGTATG TAGCAGCCACTCAACCCATCAATGCGCTAGCATTTGTTTTTGATGGAGTTAACTATGGAGCTTCAGATTTCATATACTCT GCTTACTCAATGGTAAGTTCAGAAAAATTTTCTTCTGCACAAATCAAAGTATGTGAGATAGCATTCATGAGCCATGAATG TTGGTCAATCTTACTTTGGCATAATTGACTTTGAAAACCAGGTAAAAAAAATGTAGGTTTAAATATTTTATTGTACTGCA TTATTGGAAGTTACTGGTTTTAGTCCCTCTTTGTTTTGTTGTTTGACTTTACTCCCTGTATTTTCGAACTAGCCATGTCT CAGTCTCCGAGAGGATCAATACCAAGAGAAAAAGACAATTTCAAGAACTATTTTTTTTAGTAAATTTCAGTGTTCAAAAT TTCCTTTTTCTTTTGGTATTAATCCTTTCAGAGTGTGAAATTATTTCAAAAATACAGGGACTGAAATCATGCAACAAAAC AAAGAGGGACTAAAACCAATAACTCCAATAATGCAGGGATCAAAAAAATATTTAAGCAAAAAACTATTCAATGTTGATGA ACCAATAAATCTTTTTATCTTTTCTCTCTTTTTTTACTTCGAAAAATCATAGTTGTGTTTAATACAGTCACCAGCCCCTC CATTTCCTGCTGTGATACAATTTGTCTCTGGCTTATGTATTTGCCATCACTTTTCTCCCAGATTATGGTGGCATTGGTGA GCATATATATCTTATATATGTTATCCTCAAGCCTTGGCATGACTGGTATCTGGATTGCGTTGTCTATATACATGAGCCTA AGGGTGTTTGCTGGCTTTTGGAGGTAATTTCTTTTGCTACACATAAATCATTGTCAGTATGAGTTATAATCAAGCAATTT TCTAAGACCAAAAAAATAATATCCATCACTTCTCCTACACCCATATTTCATTTACAATGAAATAGAAATTTAATCAAATT ATAATCATAACAGATATGGAACTATGCATATGACAAAGGATTGAAATGATGTAGCGTTTATGAACTTCGATTTGCAGAAT TGGTACTGGATCAGGACCTTGGAGCTTCCTTAAGGATAACTTTGCAAGACCCCAATAA
CDS sequence (LotjaGi5g1v0056000.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAAAACCAGCGCAACAATACTTGACGTTGAGGTCATTTGGTGCACCAGCTGTTATTCTTTCTATGGCAATGCAAGG AGTTTTTCGAGGAATCAAAGATACAAGAACTCCTTTGTATGCTACAATTGTGGGAGATTTAGCAAATATCATTTTAGATC CATTACTTATATTTGTAGTCCGGTTGGGAGTCAGTGGGGCCGCCATTGCTCATATTATCTCCCAGTACTTGATTACCTTA ATTTTGTTCTGGTATTTAATGAAACAAGTTGTTCTCCTTCCGCCAAGTATCCAAGACTGCCAATTTGGGAAGATTCTGAA AAATGGGTTTCTATTAATGATTAAAGTTGTAGCTGTGACATCATGTGTGACCTTGTCAGCATCCCTAGCAGCAAGGCAAG GATCAACAGTGATGGCTGCGTTCCAAATCTGCTTACAGATTTGGATGGCAACCTCTTTGCTTACTGATGGATTGGCTGTT GCTGGACAAGCCATTATTGCAAGTGCATTTGCAAGAAGGGATTACAGCAAGGTCATATCATCTACTTCACGTGTGCTGCA GCTTGGCTTGATTCTAGGGTTGGTACTTTCATTCCTTCTATTTAGCCTACTACCATTTGCTTCTAAGTTATTTACAAATG ACATCAATGTTCTGCAACTTATCAGTATTACTATTCCATATGTAGCAGCCACTCAACCCATCAATGCGCTAGCATTTGTT TTTGATGGAGTTAACTATGGAGCTTCAGATTTCATATACTCTGCTTACTCAATGATTATGGTGGCATTGGTGAGCATATA TATCTTATATATGTTATCCTCAAGCCTTGGCATGACTGGTATCTGGATTGCGTTGTCTATATACATGAGCCTAAGGGTGT TTGCTGGCTTTTGGAGAATTGGTACTGGATCAGGACCTTGGAGCTTCCTTAAGGATAACTTTGCAAGACCCCAATAA
Protein sequence (LotjaGi5g1v0056000.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKPAQQYLTLRSFGAPAVILSMAMQGVFRGIKDTRTPLYATIVGDLANIILDPLLIFVVRLGVSGAAIAHIISQYLITL ILFWYLMKQVVLLPPSIQDCQFGKILKNGFLLMIKVVAVTSCVTLSASLAARQGSTVMAAFQICLQIWMATSLLTDGLAV AGQAIIASAFARRDYSKVISSTSRVLQLGLILGLVLSFLLFSLLPFASKLFTNDINVLQLISITIPYVAATQPINALAFV FDGVNYGASDFIYSAYSMIMVALVSIYILYMLSSSLGMTGIWIALSIYMSLRVFAGFWRIGTGSGPWSFLKDNFARPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 302 | 302 | 7.55637E-86 | – | |
| Pfam | 1 | 55 | 55 | 1.1E-7 | ||
| Phobius | 1 | 13 | 13 | - | – | |
| PANTHER | 1 | 312 | 312 | 1.6E-171 | – | |
| TIGRFAM | 1 | 282 | 282 | 8.4E-85 | ||
| PANTHER | 1 | 312 | 312 | 1.6E-171 | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 14 | 32 | 19 | - | – | |
| Phobius | 33 | 38 | 6 | - | – | |
| Phobius | 39 | 60 | 22 | - | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 61 | 65 | 5 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 66 | 87 | 22 | - | – | |
| Phobius | 88 | 107 | 20 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 108 | 131 | 24 | - | – | |
| Pfam | 113 | 270 | 158 | 3.0E-16 | ||
| Phobius | 132 | 136 | 5 | - | – | |
| Phobius | 137 | 167 | 31 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 168 | 187 | 20 | - | – | |
| TMHMM | 188 | 207 | 20 | - | – | |
| Phobius | 188 | 208 | 21 | - | – | |
| Phobius | 209 | 219 | 11 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 220 | 241 | 22 | - | – | |
| Phobius | 242 | 252 | 11 | - | – | |
| TMHMM | 251 | 273 | 23 | - | – | |
| Phobius | 253 | 273 | 21 | - | – | |
| Phobius | 274 | 278 | 5 | - | – | |
| TMHMM | 278 | 300 | 23 | - | – | |
| Phobius | 279 | 301 | 23 | - | – | |
| Phobius | 302 | 318 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0056000.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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