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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0060300 |
| Transcript ID | LotjaGi5g1v0060300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4050 family protein; TAIR: AT5G25360.3 hypothetical protein; Swiss-Prot: sp|Q9LAI2|MTB1_BACSQ Modification methylase BslI; TrEMBL-Plants: tr|K7MN24|K7MN24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0060300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10125049..10130183) extracted from Lotus japonicus Gifu genome v1.2.
ATTCAGTTAAATATCAAAACGGACCAATAATCAACCAAAAAGAAGTCTACAAGTGCGCAAGAACTCAAATGGGTTGAGGA CCATAAGGGCGTGTTTGTTTATCTTCCAGGTTTGCCTTAATTCCTCGGCAAGCAATGAACCAAAGTGGCCGTTGTTTTAT ATTATTTTCTGGAGAACCAAACAACTCGAATATTTGCTATCTTTTTGTCCCTCACCTTTCTTTTCTTTTTCATTTTATAA TATTTAATATTATCATCATTTTAGGGCTTCAGAATTTTCGGTGACAAATCCAATTCTGTACATCACGTTCCTCATTGGTT CTGTGGCGTGCATAGGGTGAGTCCTTTGTTCTCTTTCTTGCTTGTCTTTCTTTGAAATTTTCTATTTGAAAAAATTTCAC TTTCACTGTCCTACTTATTACTTAATCTCAAAGGAAGAAGCACCTTTTGTAGTTATAAAATTTTATAATCTTGGTTAACT TAGCTTGCTTAGTAAGTTCAATAATCAAATAAGTGAGTTTTCAGGTTCTGTCTATTTGAAGATTGGAGGTTAAACCACTA ATTTTCTTGGTTAATGTGTTTGTTGCTTCTTGAATTTCAGAAATTTTGAGAATTTTTGCTGCTTTGCATCTTGTGACCTT TCTGGGTATATTAAGGTCATTCTATGTTATTAGTAGCACTTTTATAATCATGTTTAGGAATCTTTATTATACTTGCTTGG TTTTTAAGCAAGCATAAGCATAAGTTGGTATAATAAGATACATAGAATTTGTTAGCATCCTTTCATAGGAAATATGTATC CTGGGTGTTGCTTGTTAGCGCCGCCGTTGGGTAGATGCTCTGGGAAGAAAGCTTGTGGCTCGTTTTTACTGTTTTGTGGT GCCTGTTTAAGTGCTCTTGTGCTTTCTGCCATGGAAAAGTTCAAGCTCAAATGCAAAGGGATTTTCTCCGTAAGAGAGAC TTGTTTTATGCTGAGTTTAACTTCAGGATATTTATGGTTAAACTAGTTGGAGCTCTTTTGTATTTTTGCATTTCTTAGAG AAGGGGAAAAGGGTTTCGTTGTGGACCTTAGTGCGTAATTTTGACCCCTTAGAGCCTACATCCTTTATTTCTTCTGTCTT GCTATCACAGTGCACTTTGTTTTGGTTGATTTCTACACACATCATGGTAGGCTTTTCCACCCTCAATGTCAAAACAATGG CTACATCATTCTCGATTTGCATTTACTTTTCTCAGCTGATTTTTTTATTTATTGCAGGGGGGGGGGGGTGGTTGTTTTTT TTATAGAGCTCAATGGTGTAGTGTGATTCATATAGCTGACCCCTTTTTGTGGGATAGACTTCTATTGTTGTTGTTGTTGT GAATTGGGGGGGGGGGTGTCTATAGTGCTTTCATATGTTTATCATAGTGAGCCTAGCAGATGTTCAAGACACAGGTTTGC TACAAATTTTTTTTTTGTTTAAATGTGAATTCAGTAATTGAAAAATTCAATGATAAGAAATTAGCAAGCGTTGAATAAAC TTGATGGCAATATTTATGTTTTGAAATCATTTACCCCCGCAGTCTTTAATTGCAAATATTTGTATTTTTGTGAGGCATAA TTTTCTTGCACAGACATTGACTGTTAAATAAATAAACATGTTCTTGTATCATGTGAGGAGAAAGACATAAAAGTTAGTTA CTGAGGAAGTTCATATCTCTGATGTGCTATTGATGTGAGAAAGCCTCCTACAGAAACATTAAAGGATATCAAAATAATTA ATAGGTGAAAACATACCAAGCAAGTAGGCTATTACGTCTCTGTCTGTTTTACTTGTCGTTTAATGCATTGTTTTGGTCTA TTGAGTAATGATAAGTACTATAAATGGAGTGATACACTTGTGCAAGGTTTTGTAGTTCAACTTGAGCAATGATTGGCACC TACAGTTCTTTTTACCATCAATATCTGCTTTTAATTCTAGTTGGTAGAGTGTAATGTTAATAGTTGGTGTTATTATTCAT AATTATGATTTAACCTTCTTGTGGTTGTATTGTACCTGCTTTCTAACAGAGCATAGGTTGTCTTGGAAGCTGCACAAAAC CTCCAGTTATTGGTTCAATGGATGAGGCATCTAAAGGACTAAGAAATCAAGGTCAAACAGTGACTAAAGATGATGGATCA TCAGATTTCTGGAGCAGCAACACTATCGAAATGGATCATAATGCAGCTCAGTCGCTGAGAAGCGTCTCATCAACTGCAAC ATCAAATTATCCTTCTGATCCCCAAAGTAGTGCATGCAGTCAAACTGCTCCTCCTGAATTTGTCAACCATGGCAAGTTTG TTGTTACATGTTTATTTTGTATTGGTTCTCTGATGTGGAAATAGCCTTCTTTATTTGTTAATAGAGTTATACCGGACTAA GGTGTATAACGATGTTAGTTTCTAATTTGACTTATCTTCTTCTGTTTTGGTTTGTTATTGTGTTCTTCATCACCTTCCTC CGGATTTTTAAATATCTCCCCTTTTGTTCTCCAAAACTCATTTCTCTCTGATCTTTGGGGTTTCCTGTCTACTTCAAACC TTCCCATTCCAGAAGCACCTCTTCTCTTTACTCCCCTTTTGTTTTTTGATAAGCATCTTCTCTTAACTCCCGTGAATCTT CTTGATTCAAACATATTCCTTTCCTCTCCCTATGCTCGATTAACTCCATTTGATGCCAAAATATATTTTCCTCATGGCTC ACCCTGATGTTCCATTAGCATTCGATAAGACTTATTTCCTCACTTCTCATGGTGAGACATTCATTCCCAAACCTGAATGG TCTAAGGTGTATAACAATGTTTTTGTTGTTTCATATATAATTTTTTGAAAACCGGAAACAAAGTGACACTTCTGTAATTA TCATCGAACATAGGAAATGAAATCTCGAAACTATTTCTCGAATCAAACTGACTATGAAATATTGAATCAAACTCGTTGAC CCTCAAGGAATAGTAACAATTCAAATTCCTTGGGATTGGTAGAATGCCATCTTATGCTGAGTTGTGAAATGCACCTTTTT TATATTTTTATTTTCTCCTTTAATTCTCTTATTGAAATGAGGAGAAAATGTCTGCCTCTCCTCAGATGCAGTATTGCTTG TCAATTGATGCATAGAAAGTTAATTGGCTAAACTATAATTTCTTTCAATTTGTTGCAGTATTGTAGTCAATTAGTTATGT ACTATTTCTGGAACTTACAATTAAAAGCTAGTTTTTAGGGTTTTAGATGATCCGTATGGCGTATGCATAATTCTTTATTT TCATTTCAAATGAAATGACAGAAAAGTTTGATGTGTGCAGGGCTTCTTCACTGGTACCAGATGAGGCAACAATGGGTTGG AAATAAAACCTCTGAGAGTCAGACAGAAGTTCGAGAACCAAAAATAAGGTAAATTAGTATATGCATTCTAATGAAAAGCC AAAGTTTTCAGTTGCGATAGAGTATACAAAGAAAAGAAAAGTGTGCCTTACCCATTTCCTTTCATGCATATTCCAGCTTT TGAAAAATATAAAGCTTTTGTGGCTGATTACCTCAATGTAAAATCTGCTTGTTTTGTACATGCAGCATTAGGATTTGGTT CCTCTAAAGTGATGGAGTCATTTTAGAGGGTAAAGTAAGTCATTACAACCGTTGATTGAAAATTCAATAGTTGGGATTTA AAGAACACCATAGTTTGTTATACATGTGCAAGTATATGATCACAATCACAAAGGTTTTGATGGCTTACTTTACCATCTAA AATGACTTCCTCACTTTAGAGGAGTCAAATCCGTCGTATTGGATCATTGTCTGTTTTTATGCTAGTTAATAATAAAGCAT TGTCTGAGCACGTTTTACCTATATATCATTCTGGTGCTAATTTTCACATTAACTAAGCTTTTAGACTCTAAAGTTTACAG TCTAAAGTTTACAAGTCTTAACTGAAATGAACCCCGTCCTTTTTTTTCTTGATATTTTTAATAGGGATTGGTTTTCCTTT GTTCATGCTATTCATTTTATTATTAAACTGCGTTGTTTCCTTGTTGATGACAACTGTGAGCATTTTTGATACGTGACGGA GTCAGGGATATTGATCAAAGATGCATGAAAGTTGGGACTAGCATTCACTACAAATATGTTTTTGTTAGCCTCTAATTCTC AGTTCATGTTTCACAGTTTGAATGCCACCTACGACAATCTACTTGGAAACAACAAGCCCTTTCCCCAACCCATCCCTTTG AGAGTATGATTTTCTGAACTTGGCTCTTCTCTATTGATATTCTAGTAGCATATCACTCACTAAAATAAAACAAGGCAGCT TAGAGTGCTCCCCTACGACTCATAAAGATTTATTTTGGCTTAAATGTGTTTTTGGTCAATGCATTATACAAAATTTTTAG TTTTAGTCTCTCATAGTTTTTTGTTAGACTTTAGTACCTGTATTTCCGAAATTGTCATGTTTCAGTCGATGAGAAGACCA ATACCAAAAGAAAAAATAAACTTTTGAGGACTGAAATTTGCTAAAAAGATTGTGTTTGAATTTGCCTTTTTCTTTTGGTA TTGGTGCTGTTAGAGATTGAGACATGATTATTTCGAAAATACAAGAATTGAAGTCAAATAAAAAAGCAAAGAGAGACTAA AACTAATAATTTCCAATAATGCAGGGACCAAAAACATTTAAAGTTTAAACCTTATTTTTTTCTTTTGGAACATGTCACTG ATTGATTATTATATTTTTGGTGACAGGAAATGGTATACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTATATGACTGA TCAAACAAAATAGGCGCTATTTTTTAATGGATTTTGCACAGGAAGTGAGGTGGAATTTGTTCATTGTCTTACTGGATAGT TTAGAATAGTGCAACTCTTGCAAGTTGTTTTTTATTAACTCTTCTGTAGTTCTTTGCTAATACTAAATGAATTAAACTAG ATTAATTGTATAGTTCTTCCTTCCTTTTATTTTTTACTTGGGTGATTTAGAGAAGCTTCTTGCACAGAGATAATTTCAAG TTTCACCTGCTGCTTGTTTCTGGCCTAAACATTGATCTTCAAGAGCAGATGTTTCTTGTTGTCACTAGTTCCACAAAATA TTTTATCAGTGGAAG
CDS sequence (LotjaGi5g1v0060300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAGGCATCTAAAGGACTAAGAAATCAAGGTCAAACAGTGACTAAAGATGATGGATCATCAGATTTCTGGAGCAG CAACACTATCGAAATGGATCATAATGCAGCTCAGTCGCTGAGAAGCGTCTCATCAACTGCAACATCAAATTATCCTTCTG ATCCCCAAAGTAGTGCATGCAGTCAAACTGCTCCTCCTGAATTTGTCAACCATGGGCTTCTTCACTGGTACCAGATGAGG CAACAATGGGTTGGAAATAAAACCTCTGAGAGTCAGACAGAAGTTCGAGAACCAAAAATAAGTTTGAATGCCACCTACGA CAATCTACTTGGAAACAACAAGCCCTTTCCCCAACCCATCCCTTTGAGAGAAATGGTATACTTTCTTGTTGATATTTGGG AGCAAGAGGGTCTATATGACTGA
Protein sequence (LotjaGi5g1v0060300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEASKGLRNQGQTVTKDDGSSDFWSSNTIEMDHNAAQSLRSVSSTATSNYPSDPQSSACSQTAPPEFVNHGLLHWYQMR QQWVGNKTSESQTEVREPKISLNATYDNLLGNNKPFPQPIPLREMVYFLVDIWEQEGLYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| PANTHER | 1 | 140 | 140 | 3.1E-78 | – | |
| PANTHER | 1 | 140 | 140 | 3.1E-78 | – | |
| MobiDBLite | 7 | 65 | 59 | - | – | |
| Pfam | 31 | 97 | 67 | 6.9E-10 | ||
| Pfam | 99 | 140 | 42 | 2.0E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0060300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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