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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0075200 |
| Transcript ID | LotjaGi5g1v0075200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Interactor of constitutive active ROPs 2, chloroplastic; TAIR: AT2G37080.3 ROP interactive partner 3; Swiss-Prot: sp|Q9ZQC5|ICR2_ARATH Interactor of constitutive active ROPs 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GK72|A0A1J7GK72_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0075200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12432023..12436901) extracted from Lotus japonicus Gifu genome v1.2.
GGGTACATGAACACTTGCCAAGTTGCCGCCCTCCGTCGCTTTGAAAGAAACACCGGGAGTGATGTTGTAGGTCCCGTTGT GTGACAGGGCGCGTGGAGGTTAAGGAGCGTGACATTAATGGCGCCTCGATTTCAAACTTTTTTTGCTTCTGTTGTTGCTG CCTGCCATCACTGACAAAAACAACACTAAAACAAACAAGATTGAAACACTTGGGAACTGAGCACCAGAGAAAGCTGAGCT TCTTCTACCAATGCCTACCCTCCACCCTTAACCCCCTCTTTCTTAAACTAGGGTTCCTCACCTCACACTTTCACATTCAC TGCATCCATCTCAGTTCACACCACACCAACTTCCCCCTCTGGTAACTTTTTTGTGTTGGAGCTATTTTCTTCCATTTTTT TTTTTCACTTTTTCCATCTATTTGCTTACAAAGTTCAGTTCTTTCTTTTTTCTCCTCATAGTTCTAACTCAAAGTTCATC TGGGTATTAGTACATTTGCACTAGTGTGTTGCTGGTTTCTTAAAGTTTGGTTTTTTTTTTCCTCCAACATGGGGTTGTTT TGAGGAAGTAAAATGGGGACTCATGCACATTGTTCTGATGTGAAACCCAGGATGCTGCTTTTTTTGGGGGGGGTTTTTTC TTCTCTTATTTTTCTGGTTGGTTTCTATTTTACAACACTTGGCAACTAGTTAACAACAAAAACATGTTGATCTTAAAGAT GGTTTCTTTTTATTGGTGTGTGATTGATGATTTCTCTGCCAGTGCTTGTGCTGGTTTGCCCTATCTGTTTTTTTTATTGG TTAGTTTACTTTTCTTTTGTATTATAGTGATTTGGTTTCAAGCTGCATGTAGATCTGGGTTTTGTCTCTCAGCTGTGTTC ATGAAATGCTTAAAGTTTGCATCTTTTCTCCATTTTTCTTCCTGGGGTTTCACTTATGAATAATGGGTGGCAAAAACTGC TCCTACATTTATTAGGTTTCTGGTTTTATGTTGCAGAAAAGAAAATTGCACTTTTTTGTTTTTTTGTCTTGGAACATGAA AGAGTTGTGAAATTGTAGGGGTCTATGCTCTATGGAGTATAAACCAAAATTGCAATTTTGGTTTAAGTTGGGCTTGGATG CTGATCGGGTTTCATTGTATTTTGTTGCTGTTCCATAAAGGCTCAGGTGTTTTGTGGTACTGGAGTAAAAATGAGGGAAG GTGTAAAAGAAATTTGGAAAAGTTGGAAGATGGTTTTCGGCTAATAATTATTTACTAATTATTTTGGTGCAAGGTTCTGT TTATTTGATATTTCTATTAGTCTATTTATTATTTGTGTTTTGAATTGGGTTGGTGGTAGTGGAGTTAGTTTACTTGGAGT TTCTTTGAAGGGATTATATGCTGTTTGTTTGTTAGATTTTTTGTTGTTCAATGCTGATCCTAGGTGGTCATCTACTGGAA AGTGCAAAACTTTGCATCTTTTCATAGTTATAAATCAAATTCCTTATTGTCTTTATTCCTTTCGCAGATTAACATTGCAG GAAGTGTGGGTCAGGGGCTTTAAAAGAGAGAGAGGGAGGTTGTTTAGTTTAACCCTTTCTATCATCAAAATATCTAAACA TGCAGACACCAAAAGCAAGGTAAGATTGTCATTTGAGCACTTTTGCAGCATTCCTATTTTCTGGGTTCTAAATGAGGGAT GAATTGTTTTAATTTCATTGATTGGTTATATGCTTTAATTTGAAGTTTTAATTTGGGCCTAGTTATTTGATTGGAGTTGA TTACTGAACATCTAATGCATCTTATTTCATTAAATCTATTCTATAAAAATTGAATATGATGATGTATGGGATCTGAATGA TGGACGAACATAAACTATGATCCATTATTTCAAGGACATCTAAAGAACTAATTTGGGGGCATATTTGTTTTTAGTTGGAA CTTGGAACTGTGTAATGAACTTGTAACGAGTCATATTGTGGTAGATCTATTTTATATATTTTTTGGGTCTTAGTTTGCCC TCTATGTTACAGGCAATTTTTTGATAATCTTTCTCTGTTTCTCTACTCAAAACATAACTCTTCTTGTGTGTGTCTTAATT CAAAACATAACTCTTCTTGTGCGTTGATACCATTTTATTCAATCATCTTATTAAGATATATCAAGATGCTTTTTAATCTG TATTCCAAATTTATTTATGCATGCTCATTGGCATTTGGTTGGCTGTGAGCAGAACTGGTACTTCAGAAGTGCCCCAAAGG AAATCTCCAACAACTCCTCGAACTGCTCGCAAATTGAAGACACCAGGATCCGATCCTAACTCAGCTTCGTCATCTCCAAA CCCAGCAAGTAAGACTCCAAAAGATAGGAGCCCAAAGGTCACGGAACGTAAGTCACCACGAAGTCCAATTCCTGAGGTAC ATTTTAAGTTAGTTCATGGCTAAAAGTCTAGAATTTAGTAACCCCCTCCTCGCCCTCTTATACTCGGTGCATGTTTAGAT ACATGGTAGATTTTCACGTTGGTTGGAGAATTGGTCGGGAGCAAAATTGATTCTTGAAGATATAAAAGTGAATCCAAACA TGCTATTAGCCTCTGATAATGTAGCTATTGATAATCTAGGGGGATGGTAGACTGAATGAAATTATATAGTTCTTCACAAA TCTATTTTCAATATTGTACAAAACCCAAAATATTTAAATTATTTGTAATTTTTTAAAGTTTATGATTGACATAACTCCTT GTCCTTTATCATCTGGCTCTAGAAAAAGCGAACAAGCAGGGTCCAGGAATTGGAGTCTCAGCTAGCTCAACTTGAAGAAG ATCTGAAGAGAACTAAGGACCAACTTAACTCATCTGAGTCATGGAAGAGAAAAGCTCAGCAGGAGGCTGAAGATGCAAAG AAGCAGCTGTTAGCCATGTCAAAAGACCTGGATGAATCCCAACAACAACTTATGGAACTATCTGCTTCTGAAGAAGAACG GCTTCAAGAGCTCCGTAAAATTTCTCAGGACCGAGATCGAGCATGGCAATCTGAACTAGAGGCTGTCCAGAAGCAGCACT CAATGGACTCATCCGCTTTGGTGTCTGCCATGAACGAAATCCAGAAATTGCAAATGCAACTTGAAAGAGCACGTGATTCT GAAGCTACGGAGATTGAGAATGCAGAGTCAGCAAATGCCGAGACTCAGGACATGAGGATGGAGCTTGATGAAACTCTCTC TTTAGTGGAGAATCTAAAAAATGAGGTAAGCCATAGCAAAGAATCTGAGTCCCGGGCTTTGGAAATAGTTGACAAAACTC AAATGCAATTGGAAGCAGCAAATAAGATCATAGAAACACTCCAGTTTGAAGGTGCGAAAGAGGCTGAAGTTTACCAATCC TTAGCCGTAGAATTGGAGCAATCAAGAGTTCAAGTCAAATCATTGGAGGAACTTGTGAGCAAACTTCAAGCTGACTTGGG CAGCAGAGCTAACAACACAACCATTGAAACTGGACCTGCACTGGAGAATGTAGAAAGTGAGGAGATGAATCAGCTCAAAA CTGAGCTTGTCTCAGCCAAATTTGAAGCAGGAGAGTTGAAATCTGCATTGGAAGTTGCTGAGGTACGATACCAGGATGAG TACATCCAGAGCACTTTGCAGATTAGAAGTGCTTTTGAACAACTGGAGCGTGCGAAATCAGAATCTTTTCAGAAACAAGC TGAATTATATGAGGAATTGAAAACAGCTAAAGCTGATATTGAAGAGTTAAGGGCAAGCCTGTTGGACAAGGAATCTCAGC TGCAAGGTTTATCAGAAGAGAACGAGAGACTCAAATCAAGGATTAAGCAAAACCAGCCTAGTGAAATAGAATCCGAGTTT GTGGTGGAGCTTAACAAATTGGATTCTGATATAGCTGAGTTGAAGGCAAGGTTATTGGACAGAGAGACAGAACTGCAAAA TGTGACCGAGGAAAACAATGCACTCAAGATGGAAATAAACACAAGGGAGTTAGAGAAGAATAAAATCACGGATGAAGCTG TTGCTTCAGCTGAAGCAGCAAGGGCTGCGGAGCGAGAGGCTCTGACGAAACTTGGCTACATAGCAGAAGAAGCTGATAAA AATAACATAAGGGTAGAACGGGTAACTGAGCAGTTAGATGCTGCACAGGCTGCAAATTCCGAGTTAGAGGCTGAGTTAAG GAGATTGAAGGTGCAGTCAGATCAGTGGAGAAAAGCGGCCGAAGCAGCTGCGTCAATTCTTTCTACTGGAAACAATGGAA AGTTTGTGGATCGCACAGCGTCACTCGACAGTAGCTACAACAACTCTATTACTGGTAAGATGGGTTCGCCTTATTTAGAA GACACTGATGATGACTCGCCCAAGAAGAAAAATACAAACATGTTGAAGAAGATTGGAGTTTTATGGAAGAAGAATCATTA ATTCATAGATGATGACACTGCACTATTGCAGGTAATGTAGTATTGTATACTGTTGTTGAGCCAATGGTGTTTGATGTACT GTTTCACTGGACTTGTTTGCTTTTGATTATTGGCAGGTAGCATGTGTGGTTTGATCACCATTCAAGCAATCATTGTATGT TGAAGATGCAATGGAACCACATTGTAATGGTGCAGTGAGTGTTTATAGACCGTGAATGTATTTGAACTTTCTAAGAATTT TCTTGTCACCATATCCCTAGTAAGTAGTTTGTAGGGAAATGCAGGGGGGAAATTGTTTTTGATCTTTTGTTATTTGAGAC TCATGTTGTCATTGATGTTTCATTGTTCATGTATTAGATGTTATGTGCCTTCCTTTTTAATGTTGTTGATTTCTTTTTGT TCTTTTTGCTGTTAAGTAAAGGGAAATAAGAGCATGGTTGGTAATTACAAAAATCTTTCATCTCATGAGTTACAATTAA
CDS sequence (LotjaGi5g1v0075200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGACACCAAAAGCAAGAACTGGTACTTCAGAAGTGCCCCAAAGGAAATCTCCAACAACTCCTCGAACTGCTCGCAA ATTGAAGACACCAGGATCCGATCCTAACTCAGCTTCGTCATCTCCAAACCCAGCAAGTAAGACTCCAAAAGATAGGAGCC CAAAGGTCACGGAACGTAAGTCACCACGAAGTCCAATTCCTGAGAAAAAGCGAACAAGCAGGGTCCAGGAATTGGAGTCT CAGCTAGCTCAACTTGAAGAAGATCTGAAGAGAACTAAGGACCAACTTAACTCATCTGAGTCATGGAAGAGAAAAGCTCA GCAGGAGGCTGAAGATGCAAAGAAGCAGCTGTTAGCCATGTCAAAAGACCTGGATGAATCCCAACAACAACTTATGGAAC TATCTGCTTCTGAAGAAGAACGGCTTCAAGAGCTCCGTAAAATTTCTCAGGACCGAGATCGAGCATGGCAATCTGAACTA GAGGCTGTCCAGAAGCAGCACTCAATGGACTCATCCGCTTTGGTGTCTGCCATGAACGAAATCCAGAAATTGCAAATGCA ACTTGAAAGAGCACGTGATTCTGAAGCTACGGAGATTGAGAATGCAGAGTCAGCAAATGCCGAGACTCAGGACATGAGGA TGGAGCTTGATGAAACTCTCTCTTTAGTGGAGAATCTAAAAAATGAGGTAAGCCATAGCAAAGAATCTGAGTCCCGGGCT TTGGAAATAGTTGACAAAACTCAAATGCAATTGGAAGCAGCAAATAAGATCATAGAAACACTCCAGTTTGAAGGTGCGAA AGAGGCTGAAGTTTACCAATCCTTAGCCGTAGAATTGGAGCAATCAAGAGTTCAAGTCAAATCATTGGAGGAACTTGTGA GCAAACTTCAAGCTGACTTGGGCAGCAGAGCTAACAACACAACCATTGAAACTGGACCTGCACTGGAGAATGTAGAAAGT GAGGAGATGAATCAGCTCAAAACTGAGCTTGTCTCAGCCAAATTTGAAGCAGGAGAGTTGAAATCTGCATTGGAAGTTGC TGAGGTACGATACCAGGATGAGTACATCCAGAGCACTTTGCAGATTAGAAGTGCTTTTGAACAACTGGAGCGTGCGAAAT CAGAATCTTTTCAGAAACAAGCTGAATTATATGAGGAATTGAAAACAGCTAAAGCTGATATTGAAGAGTTAAGGGCAAGC CTGTTGGACAAGGAATCTCAGCTGCAAGGTTTATCAGAAGAGAACGAGAGACTCAAATCAAGGATTAAGCAAAACCAGCC TAGTGAAATAGAATCCGAGTTTGTGGTGGAGCTTAACAAATTGGATTCTGATATAGCTGAGTTGAAGGCAAGGTTATTGG ACAGAGAGACAGAACTGCAAAATGTGACCGAGGAAAACAATGCACTCAAGATGGAAATAAACACAAGGGAGTTAGAGAAG AATAAAATCACGGATGAAGCTGTTGCTTCAGCTGAAGCAGCAAGGGCTGCGGAGCGAGAGGCTCTGACGAAACTTGGCTA CATAGCAGAAGAAGCTGATAAAAATAACATAAGGGTAGAACGGGTAACTGAGCAGTTAGATGCTGCACAGGCTGCAAATT CCGAGTTAGAGGCTGAGTTAAGGAGATTGAAGGTGCAGTCAGATCAGTGGAGAAAAGCGGCCGAAGCAGCTGCGTCAATT CTTTCTACTGGAAACAATGGAAAGTTTGTGGATCGCACAGCGTCACTCGACAGTAGCTACAACAACTCTATTACTGGTAA GATGGGTTCGCCTTATTTAGAAGACACTGATGATGACTCGCCCAAGAAGAAAAATACAAACATGTTGAAGAAGATTGGAG TTTTATGGAAGAAGAATCATTAA
Protein sequence (LotjaGi5g1v0075200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTPKARTGTSEVPQRKSPTTPRTARKLKTPGSDPNSASSSPNPASKTPKDRSPKVTERKSPRSPIPEKKRTSRVQELES QLAQLEEDLKRTKDQLNSSESWKRKAQQEAEDAKKQLLAMSKDLDESQQQLMELSASEEERLQELRKISQDRDRAWQSEL EAVQKQHSMDSSALVSAMNEIQKLQMQLERARDSEATEIENAESANAETQDMRMELDETLSLVENLKNEVSHSKESESRA LEIVDKTQMQLEAANKIIETLQFEGAKEAEVYQSLAVELEQSRVQVKSLEELVSKLQADLGSRANNTTIETGPALENVES EEMNQLKTELVSAKFEAGELKSALEVAEVRYQDEYIQSTLQIRSAFEQLERAKSESFQKQAELYEELKTAKADIEELRAS LLDKESQLQGLSEENERLKSRIKQNQPSEIESEFVVELNKLDSDIAELKARLLDRETELQNVTEENNALKMEINTRELEK NKITDEAVASAEAARAAEREALTKLGYIAEEADKNNIRVERVTEQLDAAQAANSELEAELRRLKVQSDQWRKAAEAAASI LSTGNNGKFVDRTASLDSSYNNSITGKMGSPYLEDTDDDSPKKKNTNMLKKIGVLWKKNH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 620 | 620 | 0.0 | ||
| PANTHER | 1 | 620 | 620 | 0.0 | – | |
| MobiDBLite | 1 | 115 | 115 | - | – | |
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 51 | 115 | 65 | - | – | |
| Coils | 68 | 148 | 81 | - | – | |
| Coils | 174 | 229 | 56 | - | – | |
| Coils | 244 | 264 | 21 | - | – | |
| Coils | 272 | 299 | 28 | - | – | |
| Coils | 380 | 421 | 42 | - | – | |
| Coils | 438 | 479 | 42 | - | – | |
| Coils | 512 | 553 | 42 | - | – | |
| MobiDBLite | 585 | 606 | 22 | - | – | |
| MobiDBLite | 592 | 606 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0075200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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